sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on pgx86

+==============================================================================+
| rdkit 202603.4-1.pgdg14+1 (amd64)            Sat, 15 Aug 2026 20:05:56 +0000 |
+==============================================================================+

Package: rdkit
Version: 202603.4-1.pgdg14+1
Source Version: 202603.4-1.pgdg14+1
Distribution: forky-pgdg
Machine Architecture: amd64
Host Architecture: amd64
Build Architecture: amd64
Build Profiles: pgdg forky
Build Type: binary

I: Setting up the chroot...
I: Creating chroot session...
I: Setting up log color...

+------------------------------------------------------------------------------+
| Chroot Setup Commands                        Sat, 15 Aug 2026 20:05:57 +0000 |
+------------------------------------------------------------------------------+


/usr/share/postgresql-common/pgdg/apt.postgresql.org.sh -hatalia.postgresql.org -st -v'10 11 12 13 14 15 16 17 18' forky
------------------------------------------------------------------------------------------------------------------------

This script will enable the PostgreSQL APT repository on atalia.postgresql.org on
your system. The distribution codename used will be forky-pgdg-testing.

Using keyring /usr/share/postgresql-common/pgdg/apt.postgresql.org.gpg
Writing /etc/apt/sources.list.d/pgdg.sources ...

Running apt-get update ...
Hit:1 https://deb.debian.org/debian forky InRelease
Get:2 https://security.debian.org/debian-security forky-security InRelease [48.0 kB]
Hit:3 https://deb.debian.org/debian forky-updates InRelease
Get:4 https://atalia.postgresql.org/pub/repos/apt forky-pgdg-testing InRelease [241 kB]
Get:5 https://atalia.postgresql.org/pub/repos/apt forky-pgdg-testing/main Sources [77.3 kB]
Get:6 https://atalia.postgresql.org/pub/repos/apt forky-pgdg-testing/main amd64 Packages [478 kB]
Fetched 844 kB in 1s (842 kB/s)
Reading package lists...

You can now start installing packages from atalia.postgresql.org.

Have a look at https://wiki.postgresql.org/wiki/Apt for more information;
most notably the FAQ at https://wiki.postgresql.org/wiki/Apt/FAQ

I: Finished running '/usr/share/postgresql-common/pgdg/apt.postgresql.org.sh -hatalia.postgresql.org -st -v'10 11 12 13 14 15 16 17 18' forky'.

Finished processing commands.
--------------------------------------------------------------------------------
I: Setting up apt archive...

+------------------------------------------------------------------------------+
| Update chroot                                Sat, 15 Aug 2026 20:05:58 +0000 |
+------------------------------------------------------------------------------+

Hit:1 https://security.debian.org/debian-security forky-security InRelease
Hit:2 https://deb.debian.org/debian forky InRelease
Hit:3 https://deb.debian.org/debian forky-updates InRelease
Hit:4 https://atalia.postgresql.org/pub/repos/apt forky-pgdg-testing InRelease
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
  binutils-gold binutils-gold-x86-64-linux-gnu dmsetup libcryptsetup12
  libdevmapper1.02.1 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64
  libtss2-rc0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 libtss2-tcti-device0t64
  libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 python3-charset-normalizer
  systemd-tpm tpm-udev
Use 'apt autoremove' to remove them.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                           Sat, 15 Aug 2026 20:06:00 +0000 |
+------------------------------------------------------------------------------+


Local sources
-------------

/home/buildd/workspace/rdkit-binaries/architecture/amd64/distribution/forky/rdkit_202603.4-1.pgdg14+1.dsc exists in /home/buildd/workspace/rdkit-binaries/architecture/amd64/distribution/forky; copying to chroot

+------------------------------------------------------------------------------+
| Install package build dependencies           Sat, 15 Aug 2026 20:06:00 +0000 |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: architecture-is-64-bit, architecture-is-little-endian, bison, catch2, cmake (>= 4.1.2-1), debhelper-compat (= 13), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-numpy-dev, libboost-program-options-dev, libboost-python-dev, libboost-regex-dev, libboost-thread-dev, libcairo2-dev, libcoordgen-dev, libeigen3-dev, libfreetype-dev, libinchi-dev (>= 1.07.1+dfsg-2), libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-myst-parser, python3-numpy-dev, python3-pandas, python3-pil | python3-imaging, python3-pytest, python3-recommonmark, python3-sphinx, python3-sqlalchemy, rapidjson-dev, tex-gyre, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, postgresql-server-dev-10, postgresql-server-dev-11, postgresql-server-dev-12, postgresql-server-dev-13, postgresql-server-dev-14, postgresql-server-dev-15, postgresql-server-dev-16, postgresql-server-dev-17, postgresql-server-dev-18, build-essential
Filtered Build-Depends: architecture-is-64-bit, architecture-is-little-endian, bison, catch2, cmake (>= 4.1.2-1), debhelper-compat (= 13), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-numpy-dev, libboost-program-options-dev, libboost-python-dev, libboost-regex-dev, libboost-thread-dev, libcairo2-dev, libcoordgen-dev, libeigen3-dev, libfreetype-dev, libinchi-dev (>= 1.07.1+dfsg-2), libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-myst-parser, python3-numpy-dev, python3-pandas, python3-pil | python3-imaging, python3-pytest, python3-recommonmark, python3-sphinx, python3-sqlalchemy, rapidjson-dev, tex-gyre, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended, postgresql-server-dev-10, postgresql-server-dev-11, postgresql-server-dev-12, postgresql-server-dev-13, postgresql-server-dev-14, postgresql-server-dev-15, postgresql-server-dev-16, postgresql-server-dev-17, postgresql-server-dev-18, build-essential
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ InRelease
Get:2 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ Release [615 B]
Ign:3 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ Release.gpg
Get:4 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ Sources [1599 B]
Get:5 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ Packages [1636 B]
Fetched 3850 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

+------------------------------------------------------------------------------+
| Install main build dependencies (aptitude-based resolver)                    |
+------------------------------------------------------------------------------+

Reading package lists...
Building dependency tree...
Reading state information...
aptitude is already the newest version (0.8.13-8.1).
aptitude set to manually installed.
Solving dependencies...
The following packages were automatically installed and are no longer required:
  binutils-gold binutils-gold-x86-64-linux-gnu dmsetup libcryptsetup12
  libdevmapper1.02.1 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64
  libtss2-rc0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 libtss2-tcti-device0t64
  libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 python3-charset-normalizer
  systemd-tpm tpm-udev
Use 'apt autoremove' to remove them.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
aptitude -y --without-recommends -o Dpkg::Options::=--force-confold -o Aptitude::CmdLine::Ignore-Trust-Violations=false -o Aptitude::ProblemResolver::StepScore=100 -o Aptitude::ProblemResolver::SolutionCost=safety, priority, non-default-versions -o Aptitude::ProblemResolver::Hints::KeepDummy=reject sbuild-build-depends-main-dummy :UNINST -o Aptitude::ProblemResolver::Keep-All-Level=55000 -o Aptitude::ProblemResolver::Remove-Essential-Level=maximum install sbuild-build-depends-main-dummy:amd64
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
The following NEW packages will be installed:
  bison{a} bubblewrap{a} catch2{a} cmake{a} dh-python{a} docutils-common{a} doxygen{a} flex{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} girepository-tools{a} glycin-loaders{a} glycin-thumbnailers{a} hicolor-icon-theme{a} imagemagick{a} imagemagick-7-common{a} imagemagick-7.q16{a} latexmk{a} libabsl20260526{a} libaom3{a} libapache-pom-java{a} libarchive13t64{a} libavif16{a} libblas3{a} libblkid-dev{a} libboost-atomic1.90-dev{a} libboost-atomic1.90.0{a} libboost-chrono1.90-dev{a} libboost-chrono1.90.0{a} libboost-container1.90-dev{a} libboost-container1.90.0{a} libboost-date-time1.90-dev{a} libboost-date-time1.90.0{a} libboost-dev{a} libboost-exception1.90-dev{a} libboost-graph1.90-dev{a} libboost-graph1.90.0{a} libboost-iostreams-dev{a} libboost-iostreams1.90-dev{a} libboost-numpy-dev{a} libboost-numpy1.90-dev{a} libboost-numpy1.90.0{a} libboost-program-options-dev{a} libboost-program-options1.90-dev{a} libboost-program-options1.90.0{a} libboost-python-dev{a} libboost-python1.90-dev{a} libboost-python1.90.0{a} libboost-random1.90-dev{a} libboost-random1.90.0{a} libboost-regex-dev{a} libboost-regex1.90-dev{a} libboost-regex1.90.0{a} libboost-serialization1.90-dev{a} libboost-serialization1.90.0{a} libboost-test1.90-dev{a} libboost-test1.90.0{a} libboost-thread-dev{a} libboost-thread1.90-dev{a} libboost-thread1.90.0{a} libboost1.90-dev{a} libbrotli-dev{a} libbz2-dev{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcatch2-dev{a} libcommons-logging-java{a} libcommons-parent-java{a} libcoordgen-dev{a} libcoordgen3{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdeflate0{a} libeigen3-dev{a} libexpat1-dev{a} libfftw3-double3{a} libfmt10{a} libfontbox-java{a} libfontconfig-dev{a} libfontconfig1{a} libfontenc1{a} libfreetype-dev{a} libfreetype6{a} libfribidi0{a} libgav1-2{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglycin-2-0{a} libgraphite2-3{a} libharfbuzz-subset0{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhwy1t64{a} libice-dev{a} libice6{a} libimagequant0{a} libinchi-dev{a} libinchi1.07{a} libjbig0{a} libjpeg62-turbo{a} libjs-sphinxdoc{a} libjsoncpp26{a} libjxl0.11{a} libkpathsea6{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblqr-1-0{a} libltdl7{a} liblua5.4-0{a} liblzo2-2{a} libmaeparser-dev{a} libmaeparser1{a} libmagickcore-7.q16-10{a} libmagickwand-7.q16-10{a} libmount-dev{a} libmpfi0{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpdfbox-java{a} libpixman-1-0{a} libpixman-1-dev{a} libpkgconf7{a} libpng-dev{a} libpng16-16t64{a} libpotrace0{a} libptexenc1{a} libpython3-dev{a} libpython3.14-dev{a} libraqm0{a} librav1e0.8{a} libraw25{a} librhash1{a} librsvg2-2{a} librsvg2-bin{a} libselinux-dev{a} libsepol-dev{a} libsharpyuv0{a} libsm-dev{a} libsm6{a} libspdlog1.15{a} libsqlite3-dev{a} libsvtav1enc4{a} libsynctex2{a} libsysprof-capture-4-dev{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxi6{a} libxmu6{a} libxpm4{a} libxrender-dev{a} libxrender1{a} libxt6t64{a} libyuv0{a} libzzip-0-13t64{a} native-architecture{a} pandoc{a} pandoc-data{a} pkgconf{a} pkgconf-bin{a} preview-latex-style{a} python-babel-localedata{a} python3-alabaster{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-commonmark{a} python3-dateutil{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-greenlet{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-jinja2{a} python3-linkify-it{a} python3-markdown-it{a} python3-markupsafe{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-myst-parser{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pluggy{a} python3-pytest{a} python3-pytz{a} python3-recommonmark{a} python3-requests{a} python3-roman-numerals{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sqlalchemy{a} python3-typing-extensions{a} python3-uc-micro{a} python3-urllib3{a} python3.14-dev{a} rapidjson-dev{a} sbuild-build-depends-main-dummy sgml-base{a} shared-mime-info{a} sphinx-common{a} t1utils{a} tex-common{a} tex-gyre{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} uuid-dev{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} 
The following packages will be REMOVED:
  binutils-gold{u} binutils-gold-x86-64-linux-gnu{u} 
The following packages are RECOMMENDED but will NOT be installed:
  apvlv atril bzip2-doc default-jre dvisvgm evince fonts-texgyre fonts-texgyre-math fonts-urw-base35 ghostscript gv libfile-mimeinfo-perl libfl-dev libheif-plugin-aomenc libheif-plugin-rav1e libheif-plugin-svtenc libheif-plugin-x265 libmagickcore-7.q16-10-extra libnet-dbus-perl libpng-tools librsvg2-common libspreadsheet-parseexcel-perl libx11-protocol-perl lmodern mupdf netpbm okular papers python3-bottleneck python3-bs4 python3-html5lib python3-lxml python3-matplotlib python3-numba python3-numexpr python3-odf python3-olefile python3-openpyxl python3-scipy python3-sqlalchemy-ext python3-tables qpdfview qpdfview-ps-plugin ruby texlive-plain-generic tipa tk viewpdf.app x11-utils x11-xserver-utils xdg-user-dirs xpdf zathura-pdf-poppler zathura-ps 
0 packages upgraded, 273 newly installed, 2 to remove and 0 not upgraded.
Need to get 173 MB/286 MB of archives. After unpacking 1350 MB will be used.
Writing extended state information...
Get: 1 copy:/build/rdkit-binaries-forky-amd64/resolver-Airv81/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1204 B]
Get: 2 https://deb.debian.org/debian forky/main amd64 libfftw3-double3 amd64 3.3.11-1 [713 kB]
Get: 3 https://deb.debian.org/debian forky/main amd64 liblqr-1-0 amd64 0.4.2-2.2+b1 [30.0 kB]
Get: 4 https://deb.debian.org/debian forky/main amd64 libraw25 amd64 0.22.1-1 [424 kB]
Get: 5 https://deb.debian.org/debian forky/main amd64 imagemagick-7-common all 8:7.1.2.27+dfsg1-1 [73.3 kB]
Get: 6 https://deb.debian.org/debian forky/main amd64 libmagickcore-7.q16-10 amd64 8:7.1.2.27+dfsg1-1+b1 [1869 kB]
Get: 7 https://deb.debian.org/debian forky/main amd64 libmagickwand-7.q16-10 amd64 8:7.1.2.27+dfsg1-1+b1 [362 kB]
Get: 8 https://deb.debian.org/debian forky/main amd64 libcatch2-dev amd64 3.7.1-0.6+b1 [610 kB]
Get: 9 https://deb.debian.org/debian forky/main amd64 catch2 all 3.7.1-0.6 [5216 B]
Get: 10 https://deb.debian.org/debian forky/main amd64 fonts-lmodern all 2.005-2 [4533 kB]
Get: 11 https://deb.debian.org/debian forky/main amd64 native-architecture all 0.2.6 [2264 B]
Get: 12 https://deb.debian.org/debian forky/main amd64 libgirepository-2.0-0 amd64 2.88.3-2 [127 kB]
Get: 13 https://deb.debian.org/debian forky/main amd64 girepository-tools amd64 2.88.3-2 [133 kB]
Get: 14 https://deb.debian.org/debian forky/main amd64 imagemagick-7.q16 amd64 8:7.1.2.27+dfsg1-1+b1 [732 kB]
Get: 15 https://deb.debian.org/debian forky/main amd64 imagemagick amd64 8:7.1.2.27+dfsg1-1+b1 [25.8 kB]
Get: 16 https://deb.debian.org/debian forky/main amd64 tex-common all 6.20 [29.7 kB]
Get: 17 https://deb.debian.org/debian forky/main amd64 libkpathsea6 amd64 2026.20260303.78225+ds-4 [158 kB]
Get: 18 https://deb.debian.org/debian forky/main amd64 libptexenc1 amd64 2026.20260303.78225+ds-4 [51.7 kB]
Get: 19 https://deb.debian.org/debian forky/main amd64 libsynctex2 amd64 2026.20260303.78225+ds-4 [63.2 kB]
Get: 20 https://deb.debian.org/debian forky/main amd64 libtexlua53-5 amd64 2026.20260303.78225+ds-4 [113 kB]
Get: 21 https://deb.debian.org/debian forky/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get: 22 https://deb.debian.org/debian forky/main amd64 libmpfi0 amd64 1.5.4+ds-5 [36.0 kB]
Get: 23 https://deb.debian.org/debian forky/main amd64 libpotrace0 amd64 1.16-2+b3 [25.5 kB]
Get: 24 https://deb.debian.org/debian forky/main amd64 libteckit0 amd64 2.5.13+ds-2 [370 kB]
Get: 25 https://deb.debian.org/debian forky/main amd64 libxmu6 amd64 2:1.1.3-4+b1 [59.6 kB]
Get: 26 https://deb.debian.org/debian forky/main amd64 libxaw7 amd64 2:1.0.16-1+b2 [214 kB]
Get: 27 https://deb.debian.org/debian forky/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.2+b1 [58.9 kB]
Get: 28 https://deb.debian.org/debian forky/main amd64 texlive-binaries amd64 2026.20260303.78225+ds-4 [9244 kB]
Get: 29 https://deb.debian.org/debian forky/main amd64 texlive-base all 2026.20260711-2 [24.5 MB]
Get: 30 https://deb.debian.org/debian forky/main amd64 texlive-latex-base all 2026.20260711-2 [1451 kB]
Get: 31 https://deb.debian.org/debian forky/main amd64 latexmk all 1:4.88~ds-1 [515 kB]
Get: 32 https://deb.debian.org/debian forky/main amd64 libblkid-dev amd64 2.42.2-2 [212 kB]
Get: 33 https://deb.debian.org/debian forky/main amd64 libboost-graph1.90.0 amd64 1.90.0-6 [355 kB]
Get: 34 https://deb.debian.org/debian forky/main amd64 libboost-regex1.90.0 amd64 1.90.0-6 [327 kB]
Get: 35 https://deb.debian.org/debian forky/main amd64 libboost-regex1.90-dev amd64 1.90.0-6 [343 kB]
Get: 36 https://deb.debian.org/debian forky/main amd64 libboost-test1.90.0 amd64 1.90.0-6 [465 kB]
Get: 37 https://deb.debian.org/debian forky/main amd64 libboost-test1.90-dev amd64 1.90.0-6 [533 kB]
Get: 38 https://deb.debian.org/debian forky/main amd64 libboost-graph1.90-dev amd64 1.90.0-6 [378 kB]
Get: 39 https://deb.debian.org/debian forky/main amd64 libboost-random1.90.0 amd64 1.90.0-6 [230 kB]
Get: 40 https://deb.debian.org/debian forky/main amd64 libboost-random1.90-dev amd64 1.90.0-6 [232 kB]
Get: 41 https://deb.debian.org/debian forky/main amd64 libboost-iostreams1.90-dev amd64 1.90.0-6 [253 kB]
Get: 42 https://deb.debian.org/debian forky/main amd64 libboost-iostreams-dev amd64 1.90.0.2 [2844 B]
Get: 43 https://deb.debian.org/debian forky/main amd64 libboost-numpy1.90-dev amd64 1.90.0-6 [242 kB]
Get: 44 https://deb.debian.org/debian forky/main amd64 libboost-numpy-dev amd64 1.90.0.2 [2900 B]
Get: 45 https://deb.debian.org/debian forky/main amd64 libboost-python1.90-dev amd64 1.90.0-6 [359 kB]
Get: 46 https://deb.debian.org/debian forky/main amd64 libboost-python-dev amd64 1.90.0.2 [3160 B]
Get: 47 https://deb.debian.org/debian forky/main amd64 libboost-regex-dev amd64 1.90.0.2 [3124 B]
Get: 48 https://deb.debian.org/debian forky/main amd64 libcairo-script-interpreter2 amd64 1.18.4-3+b1 [58.7 kB]
Get: 49 https://deb.debian.org/debian forky/main amd64 libmount-dev amd64 2.42.2-2 [26.7 kB]
Get: 50 https://deb.debian.org/debian forky/main amd64 libsysprof-capture-4-dev amd64 50.0-3 [47.8 kB]
Get: 51 https://deb.debian.org/debian forky/main amd64 libgio-2.0-dev amd64 2.88.3-2 [1697 kB]
Get: 52 https://deb.debian.org/debian forky/main amd64 libglib2.0-data all 2.88.3-2 [1277 kB]
Get: 53 https://deb.debian.org/debian forky/main amd64 libglib2.0-bin amd64 2.88.3-2 [114 kB]
Get: 54 https://deb.debian.org/debian forky/main amd64 libgio-2.0-dev-bin amd64 2.88.3-2 [151 kB]
Get: 55 https://deb.debian.org/debian forky/main amd64 libglib2.0-dev-bin amd64 2.88.3-2 [38.0 kB]
Get: 56 https://deb.debian.org/debian forky/main amd64 libglib2.0-dev amd64 2.88.3-2 [38.8 kB]
Get: 57 https://deb.debian.org/debian forky/main amd64 libpixman-1-dev amd64 0.46.4-1+b2 [12.0 kB]
Get: 58 https://deb.debian.org/debian forky/main amd64 xorg-sgml-doctools all 1:1.12.1-1 [23.9 kB]
Get: 59 https://deb.debian.org/debian forky/main amd64 x11proto-dev all 2025.1-1 [605 kB]
Get: 60 https://deb.debian.org/debian forky/main amd64 libice-dev amd64 2:1.1.1-1+b2 [75.3 kB]
Get: 61 https://deb.debian.org/debian forky/main amd64 libsm-dev amd64 2:1.2.6-1+b2 [40.3 kB]
Get: 62 https://deb.debian.org/debian forky/main amd64 libxau-dev amd64 1:1.0.11-1+b2 [23.9 kB]
Get: 63 https://deb.debian.org/debian forky/main amd64 libxdmcp-dev amd64 1:1.1.5-2+b1 [44.0 kB]
Get: 64 https://deb.debian.org/debian forky/main amd64 xtrans-dev all 1.6.0-1 [93.5 kB]
Get: 65 https://deb.debian.org/debian forky/main amd64 libxcb1-dev amd64 1.17.0-2+b2 [181 kB]
Get: 66 https://deb.debian.org/debian forky/main amd64 libx11-dev amd64 2:1.8.13-1 [903 kB]
Get: 67 https://deb.debian.org/debian forky/main amd64 libxcb-render0-dev amd64 1.17.0-2+b2 [118 kB]
Get: 68 https://deb.debian.org/debian forky/main amd64 libxcb-shm0-dev amd64 1.17.0-2+b2 [108 kB]
Get: 69 https://deb.debian.org/debian forky/main amd64 libxext-dev amd64 2:1.3.4-1+b4 [105 kB]
Get: 70 https://deb.debian.org/debian forky/main amd64 libxrender-dev amd64 1:0.9.12-1+b2 [38.8 kB]
Get: 71 https://deb.debian.org/debian forky/main amd64 libcairo2-dev amd64 1.18.4-3+b1 [41.8 kB]
Get: 72 https://deb.debian.org/debian forky/main amd64 libcoordgen-dev amd64 3.0.2-4 [45.8 kB]
Get: 73 https://deb.debian.org/debian forky/main amd64 libeigen3-dev all 3.4.0-5 [1034 kB]
Get: 74 https://deb.debian.org/debian forky/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB]
Get: 75 https://deb.debian.org/debian forky/main amd64 libfontenc1 amd64 1:1.1.8-1+b3 [23.4 kB]
Get: 76 https://deb.debian.org/debian forky/main amd64 libinchi-dev amd64 1.07.3+dfsg-2 [19.6 kB]
Get: 77 https://deb.debian.org/debian forky/main amd64 libmaeparser-dev amd64 1.3.3-4+b1 [13.0 kB]
Get: 78 https://deb.debian.org/debian forky/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB]
Get: 79 https://deb.debian.org/debian forky/main amd64 librsvg2-bin amd64 2.62.1+dfsg-1 [1984 kB]
Get: 80 https://deb.debian.org/debian forky/main amd64 pandoc-data all 3.10-1 [531 kB]
Get: 81 https://deb.debian.org/debian forky/main amd64 pandoc amd64 3.10-1 [28.8 MB]
Get: 82 https://deb.debian.org/debian forky/main amd64 preview-latex-style all 13.2-1.1 [350 kB]
Get: 83 https://deb.debian.org/debian forky/main amd64 python3-commonmark all 0.9.1-8 [45.5 kB]
Get: 84 https://deb.debian.org/debian forky/main amd64 python3-uc-micro all 2.0.0-1 [6028 B]
Get: 85 https://deb.debian.org/debian forky/main amd64 python3-linkify-it all 2.1.0-2 [18.7 kB]
Get: 86 https://deb.debian.org/debian forky/main amd64 python3-mdurl all 0.1.2-1 [9444 B]
Get: 87 https://deb.debian.org/debian forky/main amd64 python3-markdown-it all 4.2.0-3 [63.7 kB]
Get: 88 https://deb.debian.org/debian forky/main amd64 python3-mdit-py-plugins all 0.6.1-1 [39.2 kB]
Get: 89 https://deb.debian.org/debian forky/main amd64 python3-myst-parser all 5.1.0-2 [80.2 kB]
Get: 90 https://deb.debian.org/debian forky/main amd64 python3-recommonmark all 0.7.1+ds-9 [16.5 kB]
Get: 91 https://deb.debian.org/debian forky/main amd64 python3-sqlalchemy all 2.0.48+ds1-1 [1233 kB]
Get: 92 https://deb.debian.org/debian forky/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.6 [98.2 kB]
Get: 93 https://deb.debian.org/debian forky/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get: 94 https://deb.debian.org/debian forky/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB]
Get: 95 https://deb.debian.org/debian forky/main amd64 tex-gyre all 20180621-8 [6208 kB]
Get: 96 https://deb.debian.org/debian forky/main amd64 texlive-fonts-recommended all 2026.20260711-2 [4991 kB]
Get: 97 https://deb.debian.org/debian forky/main amd64 texlive-latex-recommended all 2026.20260711-2 [8454 kB]
Get: 98 https://deb.debian.org/debian forky/main amd64 texlive-pictures all 2026.20260711-2 [23.8 MB]
Get: 99 https://deb.debian.org/debian forky/main amd64 texlive-latex-extra all 2026.20260711-2 [32.7 MB]
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Configuration file '/etc/ImageMagick-7/colors.xml', does not exist on system.
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invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
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Setting up libsysprof-capture-4-dev:amd64 (50.0-3) ...
Setting up libboost-python1.90.0 (1.90.0-6) ...
Setting up tex-common (6.20) ...

Configuration file '/etc/texmf/texmf.d/00debian.cnf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/texmf/web2c/mktex.cnf', does not exist on system.
Installing new config file as you requested.
update-language: texlive-base not installed and configured, doing nothing!
Setting up xtrans-dev (1.6.0-1) ...
Setting up libfontenc1:amd64 (1:1.1.8-1+b3) ...
Setting up python3-jinja2 (3.1.6-3) ...
Setting up libpcre2-32-0:amd64 (10.46-1+b2) ...
Setting up libglib2.0-0t64:amd64 (2.88.3-2) ...
No schema files found: doing nothing.
Setting up libblas3:amd64 (3.12.1-8) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
Setting up libglib2.0-data (2.88.3-2) ...
Setting up python3-packaging (26.2-2) ...
Setting up python3-chardet (5.2.0+dfsg-2) ...
Setting up libexpat1-dev:amd64 (2.8.2-1) ...
Setting up libabsl20260526:amd64 (20260526.0-2) ...
Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ...
Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2+b1) ...
Setting up libsqlite3-dev:amd64 (3.53.4-2) ...
Setting up python3-certifi (2026.7.22+ds-1) ...
Setting up libx11-data (2:1.8.13-1) ...
Setting up python3-snowballstemmer (3.1.1-1) ...
Setting up libteckit0:amd64 (2.5.13+ds-2) ...
Setting up libjsoncpp26:amd64 (1.9.8-2) ...
Setting up uuid-dev:amd64 (2.42.2-2) ...
Setting up libapache-pom-java (33-2) ...
Setting up python3-mdurl (0.1.2-1) ...
Setting up xfonts-encodings (1:1.0.4-2.2) ...
Setting up libfribidi0:amd64 (1.0.16-5+b1) ...
Setting up python3-greenlet (3.3.2-4) ...
Setting up t1utils (1.41-4) ...
Setting up shared-mime-info (2.4-5+b3) ...
Setting up libtexlua53-5:amd64 (2026.20260303.78225+ds-4) ...
Setting up libimagequant0:amd64 (4.4.1-1+b2) ...
Setting up fonts-dejavu-mono (2.37-9) ...

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-lgc-sans-mono.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-sans-mono.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/57-dejavu-sans-mono.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/58-dejavu-lgc-sans-mono.conf', does not exist on system.
Installing new config file as you requested.
Setting up libpng16-16t64:amd64 (1.6.58-1) ...
Setting up python3-numpy-dev:amd64 (1:2.4.6+ds-4) ...
Setting up python3-idna (3.18-1) ...
Setting up libmpfi0:amd64 (1.5.4+ds-5) ...
Setting up fonts-dejavu-core (2.37-9) ...

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-lgc-sans.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-lgc-serif.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-sans.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/20-unhint-small-dejavu-serif.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/57-dejavu-sans.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/57-dejavu-serif.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/58-dejavu-lgc-sans.conf', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/conf.avail/58-dejavu-lgc-serif.conf', does not exist on system.
Installing new config file as you requested.
Setting up libboost-program-options1.90.0:amd64 (1.90.0-6) ...
Setting up libsepol-dev:amd64 (3.11-1) ...
Setting up python3-typing-extensions (4.16.0-4) ...
Setting up pkgconf-bin (2.5.1-4) ...
Setting up libltdl7:amd64 (2.5.4-11) ...
Setting up libsvtav1enc4:amd64 (4.1.0+dfsg-1) ...
Setting up libfftw3-double3:amd64 (3.3.11-1) ...
Setting up libjs-sphinxdoc (9.1.0-6) ...
Setting up libkpathsea6:amd64 (2026.20260303.78225+ds-4) ...
Setting up libgfortran5:amd64 (16.2.0-1) ...
Setting up python3-urllib3 (2.7.0-3) ...
Setting up python3-pluggy (1.6.0-2) ...
Setting up libwebp7:amd64 (1.5.0-0.1+b2) ...
Setting up libgav1-2:amd64 (0.20.0-2+b2) ...
Setting up libpcre2-posix3:amd64 (10.46-1+b2) ...
Setting up libdav1d7:amd64 (1.5.4-1) ...
Setting up liblqr-1-0:amd64 (0.4.2-2.2+b1) ...
Setting up libtiff6:amd64 (4.7.2-1) ...
Setting up bison (2:3.8.2+dfsg-1+b3) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up python3-linkify-it (2.1.0-2) ...
Setting up libboost1.90-dev:amd64 (1.90.0-6) ...
Setting up fonts-lmodern (2.005-2) ...

Configuration file '/etc/fonts/conf.avail/65-fonts-lmodern.conf', does not exist on system.
Installing new config file as you requested.
Setting up python3-roman-numerals (4.1.0-1) ...
Setting up liblua5.4-0:amd64 (5.4.8-2) ...
Setting up libopenjp2-7:amd64 (2.5.4-1.1) ...
Setting up libx11-6:amd64 (2:1.8.13-1) ...
Setting up libthai-data (0.1.30-3) ...
Setting up python3-dateutil (2.9.0-5) ...
Setting up libboost-atomic1.90.0:amd64 (1.90.0-6) ...
Setting up xorg-sgml-doctools (1:1.12.1-1) ...
Setting up libpython3.14-dev:amd64 (3.14.6-1) ...
Setting up sgml-base (1.31+nmu1) ...
Setting up libboost-serialization1.90.0:amd64 (1.90.0-6) ...
Setting up librhash1:amd64 (1.4.6-1.1+b1) ...
Setting up libboost-dev:amd64 (1.90.0.2) ...
Setting up libboost-regex1.90.0:amd64 (1.90.0-6) ...
Setting up libpaper2:amd64 (2.2.5-0.4) ...

Configuration file '/etc/paperspecs', does not exist on system.
Installing new config file as you requested.
Setting up pandoc-data (3.10-1) ...
Setting up libcoordgen3:amd64 (3.0.2-4) ...
Setting up libboost-random1.90.0:amd64 (1.90.0-6) ...
Setting up libde265-0:amd64 (1.1.1-1) ...
Setting up libwebpmux3:amd64 (1.5.0-0.1+b2) ...
Setting up libinchi1.07 (1.07.3+dfsg-2) ...
Setting up libcatch2-dev (3.7.1-0.6+b1) ...
Setting up libyuv0:amd64 (0.0.1949.20260706-1) ...
Setting up libarchive13t64:amd64 (3.8.9-1) ...
Setting up libjxl0.11:amd64 (0.11.2-5) ...
Setting up libboost-container1.90.0:amd64 (1.90.0-6) ...
Setting up xdg-utils (1.2.1-2) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up libbrotli-dev:amd64 (1.2.0-3) ...
Setting up libfmt10:amd64 (10.1.1+ds1-4+b2) ...
Setting up libsynctex2:amd64 (2026.20260303.78225+ds-4) ...
Setting up python3-imagesize (2.0.0-1) ...
Setting up libbz2-dev:amd64 (1.0.8-6+b2) ...
Setting up python3-commonmark (0.9.1-8) ...
Setting up libpotrace0:amd64 (1.16-2+b3) ...
Setting up libboost-chrono1.90-dev:amd64 (1.90.0-6) ...
Setting up libmaeparser-dev:amd64 (1.3.3-4+b1) ...
Setting up libraw25:amd64 (0.22.1-1) ...
Setting up x11proto-dev (2025.1-1) ...
Setting up libblkid-dev:amd64 (2.42.2-2) ...
Setting up catch2 (3.7.1-0.6) ...
Setting up libice6:amd64 (2:1.1.1-1+b2) ...
Setting up libboost-serialization1.90-dev:amd64 (1.90.0-6) ...
Setting up libavif16:amd64 (1.4.2-1) ...
Setting up libinchi-dev (1.07.3+dfsg-2) ...
Setting up liblapack3:amd64 (3.12.1-8) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
Setting up libgio-2.0-dev-bin (2.88.3-2) ...
Setting up libpython3-dev:amd64 (3.14.6-1) ...
Setting up libpdfbox-java (1:1.8.16-5) ...
Setting up libboost-numpy1.90.0 (1.90.0-6) ...
Setting up libxau-dev:amd64 (1:1.0.11-1+b2) ...
Setting up libxpm4:amd64 (1:3.5.19-1) ...
Setting up libpcre2-dev:amd64 (10.46-1+b2) ...
Setting up libxrender1:amd64 (1:0.9.12-1+b2) ...
Setting up libice-dev:amd64 (2:1.1.1-1+b2) ...
Setting up python3.14-dev (3.14.6-1) ...
Setting up libboost-numpy1.90-dev (1.90.0-6) ...
Setting up python3-babel (2.17.0-2) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up libgirepository-2.0-0:amd64 (2.88.3-2) ...
Setting up fontconfig-config (2.17.1-5) ...

Configuration file '/etc/fonts/conf.d/README', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/fonts/fonts.conf', does not exist on system.
Installing new config file as you requested.
Setting up python3-pytest (9.1.1-1) ...
Setting up preview-latex-style (13.2-1.1) ...
Setting up libwebpdemux2:amd64 (1.5.0-0.1+b2) ...
Setting up libpng-dev:amd64 (1.6.58-1) ...
Setting up libcommons-parent-java (56-1) ...
Setting up libcommons-logging-java (1.3.0-2) ...
Setting up libxext6:amd64 (2:1.3.4-1+b4) ...
Setting up libglib2.0-bin (2.88.3-2) ...
Setting up libpaper-utils (2.2.5-0.4) ...
Setting up python3-sqlalchemy (2.0.48+ds1-1) ...
Setting up pkgconf:amd64 (2.5.1-4) ...
Setting up libboost-container1.90-dev:amd64 (1.90.0-6) ...
Setting up libthai0:amd64 (0.1.30-3) ...
Setting up libxdmcp-dev:amd64 (1:1.1.5-2+b1) ...
Setting up libptexenc1:amd64 (2026.20260303.78225+ds-4) ...
Setting up pandoc (3.10-1) ...
Setting up libfreetype6:amd64 (2.14.3+dfsg-2) ...
Setting up sphinx-common (9.1.0-6) ...
Setting up python3-dev (3.14.6-1) ...
Setting up python3-requests (2.32.5+dfsg-2) ...
Setting up libboost-numpy-dev (1.90.0.2) ...
Setting up libeigen3-dev (3.4.0-5) ...
Setting up libspdlog1.15:amd64 (1:1.15.3+ds-1+b2) ...
Setting up python3-numpy (1:2.4.6+ds-4) ...
Setting up python3-markdown-it (4.2.0-3) ...
Setting up libboost-exception1.90-dev:amd64 (1.90.0-6) ...
Setting up libboost-regex1.90-dev:amd64 (1.90.0-6) ...
Setting up xml-core (0.21) ...

Configuration file '/etc/sgml/xml-core.cat', does not exist on system.
Installing new config file as you requested.
Setting up cmake (4.3.4-1) ...
Setting up libboost-atomic1.90-dev:amd64 (1.90.0-6) ...
Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ...
Setting up libfontconfig1:amd64 (2.17.1-5) ...
Setting up libcoordgen-dev:amd64 (3.0.2-4) ...
Setting up libboost-random1.90-dev:amd64 (1.90.0-6) ...
Setting up libselinux-dev:amd64 (3.11-2) ...
Setting up libboost-regex-dev:amd64 (1.90.0.2) ...
Setting up libsm6:amd64 (2:1.2.6-1+b2) ...
Setting up libmount-dev:amd64 (2.42.2-2) ...
Setting up libboost-date-time1.90-dev:amd64 (1.90.0-6) ...
Setting up libboost-test1.90-dev:amd64 (1.90.0-6) ...
Setting up fontconfig (2.17.1-5) ...
Regenerating fonts cache... done.
Setting up libgio-2.0-dev:amd64 (2.88.3-2) ...
Setting up girepository-tools:amd64 (2.88.3-2) ...
Setting up libxcb1-dev:amd64 (1.17.0-2+b2) ...
Setting up libxi6:amd64 (2:1.8.2-2+b1) ...
Setting up libboost-program-options1.90-dev:amd64 (1.90.0-6) ...
Setting up libsm-dev:amd64 (2:1.2.6-1+b2) ...
Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-3+b1) ...
Setting up libpango-1.0-0:amd64 (1.58.0-1) ...
Setting up python3-mdit-py-plugins (0.6.1-1) ...
Setting up libx11-dev:amd64 (2:1.8.13-1) ...
Setting up libboost-iostreams1.90-dev:amd64 (1.90.0-6) ...
Setting up libboost-iostreams-dev:amd64 (1.90.0.2) ...
Setting up xfonts-utils (1:7.7+7) ...
Setting up libcairo2:amd64 (1.18.4-3+b1) ...
Setting up libfreetype-dev:amd64 (2.14.3+dfsg-2) ...
Setting up libxcb-shm0-dev:amd64 (1.17.0-2+b2) ...
Setting up doxygen (1.15.0+ds1-1.1) ...
Setting up python3-pandas (2.3.3+dfsg-3) ...
Setting up libboost-thread1.90-dev:amd64 (1.90.0-6) ...
Setting up libboost-program-options-dev:amd64 (1.90.0.2) ...
Setting up libraqm0:amd64 (0.10.5-1) ...
Setting up libxt6t64:amd64 (1:1.2.1-1.3+b2) ...
Setting up libxcb-render0-dev:amd64 (1.17.0-2+b2) ...
Setting up libxext-dev:amd64 (2:1.3.4-1+b4) ...
Setting up libboost-graph1.90-dev:amd64 (1.90.0-6) ...
Setting up libharfbuzz-subset0:amd64 (12.3.2-2+b2) ...
Setting up libcairo-gobject2:amd64 (1.18.4-3+b1) ...
Setting up libpangoft2-1.0-0:amd64 (1.58.0-1) ...
Setting up libxrender-dev:amd64 (1:0.9.12-1+b2) ...
Setting up tex-gyre (20180621-8) ...

Configuration file '/etc/X11/fonts/Type1/tex-gyre.scale', does not exist on system.
Installing new config file as you requested.
Setting up libboost-thread-dev:amd64 (1.90.0.2) ...
Setting up libpangocairo-1.0-0:amd64 (1.58.0-1) ...
Setting up libcairo-script-interpreter2:amd64 (1.18.4-3+b1) ...
Setting up libglib2.0-dev-bin (2.88.3-2) ...
Setting up libxmu6:amd64 (2:1.1.3-4+b1) ...
Setting up libfontconfig-dev:amd64 (2.17.1-5) ...
Setting up libboost-python1.90-dev (1.90.0-6) ...
Setting up libxaw7:amd64 (2:1.0.16-1+b2) ...
Setting up libboost-python-dev (1.90.0.2) ...
Setting up python3-pil:amd64 (12.3.0-1) ...
Setting up libglib2.0-dev:amd64 (2.88.3-2) ...
Setting up texlive-binaries (2026.20260303.78225+ds-4) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libcairo2-dev:amd64 (1.18.4-3+b1) ...
Setting up texlive-base (2026.20260711-2) ...

Configuration file '/etc/libpaper.d/texlive-base', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/texmf/texdoctk/texdocrc.defaults', does not exist on system.
Installing new config file as you requested.
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up texlive-latex-base (2026.20260711-2) ...
Setting up texlive-latex-recommended (2026.20260711-2) ...
Setting up texlive-pictures (2026.20260711-2) ...
Setting up texlive-fonts-recommended (2026.20260711-2) ...
Setting up latexmk (1:4.88~ds-1) ...

Configuration file '/etc/LatexMk', does not exist on system.
Installing new config file as you requested.

Configuration file '/etc/emacs/site-start.d/50latexmk.el', does not exist on system.
Installing new config file as you requested.
Setting up texlive-latex-extra (2026.20260711-2) ...
Setting up libheif-plugin-dav1d:amd64 (1.23.1-1) ...
Setting up libheif-plugin-libde265:amd64 (1.23.1-1) ...
Setting up libheif1:amd64 (1.23.1-1) ...
Setting up librsvg2-2:amd64 (2.62.1+dfsg-1) ...
Setting up libmagickcore-7.q16-10:amd64 (8:7.1.2.27+dfsg1-1+b1) ...
Setting up glycin-loaders (2.1.5+ds-2) ...
Setting up libglycin-2-0:amd64 (2.1.5+ds-2) ...
Setting up librsvg2-bin (2.62.1+dfsg-1) ...
Setting up libmagickwand-7.q16-10:amd64 (8:7.1.2.27+dfsg1-1+b1) ...
Setting up glycin-thumbnailers (2.1.5+ds-2) ...
Setting up libgdk-pixbuf-2.0-0:amd64 (2.44.7+dfsg-1) ...
Setting up imagemagick-7.q16 (8:7.1.2.27+dfsg1-1+b1) ...
update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode
update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode
update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode
update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode
update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode
update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode
update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode
update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode
update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode
update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode
update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode
update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) does not exist
update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) does not exist
update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) does not exist
update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) does not exist
Setting up imagemagick (8:7.1.2.27+dfsg1-1+b1) ...
Processing triggers for libc-bin (2.42-17) ...
Processing triggers for man-db (2.13.1-1) ...
Processing triggers for sgml-base (1.31+nmu1) ...
Setting up docutils-common (0.22.4+dfsg-1) ...

Configuration file '/etc/sgml/docutils-common.cat', does not exist on system.
Installing new config file as you requested.
Processing triggers for sgml-base (1.31+nmu1) ...
Setting up python3-docutils (0.22.4+dfsg-1) ...
Setting up python3-sphinx (9.1.0-6) ...
Setting up python3-myst-parser (5.1.0-2) ...
Setting up python3-recommonmark (0.7.1+ds-9) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for tex-common (6.20) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...

+------------------------------------------------------------------------------+
| Check architectures                          Sat, 15 Aug 2026 20:07:56 +0000 |
+------------------------------------------------------------------------------+

Arch check ok (amd64 included in any all)

+------------------------------------------------------------------------------+
| Build environment                            Sat, 15 Aug 2026 20:07:56 +0000 |
+------------------------------------------------------------------------------+

Kernel: Linux 6.12.101+deb13-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.101-1 (2026-08-05) amd64 (x86_64)
Toolchain package versions: binutils_2.47-2 dpkg-dev_1.23.7 g++-15_15.3.0-2 gcc-15_15.3.0-2 libc6-dev_2.42-17 libstdc++-14-dev_14.4.0-1 libstdc++-15-dev_15.3.0-2 libstdc++6_16.2.0-1 linux-libc-dev_7.1.7-1
Package versions: adduser_3.158 apt_3.3.2 apt-utils_3.3.2 aptitude_0.8.13-8.1 aptitude-common_0.8.13-8.1 architecture-properties_0.2.6+b2 autoconf_2.73-2 autodep8_0.30 automake_1:1.18.1-4 autopkgtest_6.0 autopoint_1.0-3 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3+b1 binutils_2.47-2 binutils-common_2.47-2 binutils-x86-64-linux-gnu_2.47-2 bison_2:3.8.2+dfsg-1+b3 bsdextrautils_2.42.2-2 bsdutils_1:2.42.2-2 bubblewrap_0.11.2-2 build-essential_12.12 bzip2_1.0.8-6+b2 ca-certificates_20260601 catch2_3.7.1-0.6 clang-21_1:21.1.8-10 cmake_4.3.4-1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-14_14.4.0-1 cpp-14-x86-64-linux-gnu_14.4.0-1 cpp-15_15.3.0-2 cpp-15-x86-64-linux-gnu_15.3.0-2 cpp-x86-64-linux-gnu_4:15.2.0-5 cron_3.0pl1-209 cron-daemon-common_3.0pl1-209 dash_0.5.12-12 dctrl-tools_2.24-3+b1 debconf_1.5.92 debhelper_14.3 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_22 dh-python_7.20260623 dh-strip-nondeterminism_1.15.1-1 dictionaries-common_1.31.4 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libxi6_2:1.8.2-2+b1 libxml2-16_2.15.3+dfsg-1 libxml2-dev_2.15.3+dfsg-1 libxmu6_2:1.1.3-4+b1 libxpm4_1:3.5.19-1 libxrender-dev_1:0.9.12-1+b2 libxrender1_1:0.9.12-1+b2 libxslt1.1_1.1.45-0.1 libxt6t64_1:1.2.1-1.3+b2 libxxhash0_0.8.3-2+b2 libyaml-0-2_0.2.5-2+b1 libyuv0_0.0.1949.20260706-1 libz3-4_4.13.3-1.1 libz3-dev_4.13.3-1.1 libzstd1_1.5.7+dfsg-4 libzzip-0-13t64_0.13.78+dfsg.1-0.2+b1 linux-libc-dev_7.1.7-1 llvm-21_1:21.1.8-10 llvm-21-dev_1:21.1.8-10 llvm-21-linker-tools_1:21.1.8-10 llvm-21-runtime_1:21.1.8-10 llvm-21-tools_1:21.1.8-10 locales_2.42-17 login_1:4.16.0-2+really2.42.2-2 login.defs_1:4.19.3-2 logrotate_3.22.0-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 media-types_14.0.0 mount_2.42.2-2 native-architecture_0.2.6 ncurses-base_6.6+20260608-2 ncurses-bin_6.6+20260608-2 net-tools_2.10-2 netbase_6.5 netcat-openbsd_1.238-1 newpid_14 openssl_3.6.3-1 openssl-provider-legacy_3.6.3-1 pandoc_3.10-1 pandoc-data_3.10-1 passwd_1:4.19.3-2 patch_2.8-2 perl_5.42.2-3 perl-base_5.42.2-3 perl-modules-5.40_5.40.1-8 perl-modules-5.42_5.42.2-3 pgdg-buildenv_34~20260715.1520.g889277b.pgdg14+1 pkg-perl-autopkgtest_0.88 pkgconf_2.5.1-4 pkgconf-bin_2.5.1-4 po-debconf_1.0.22 postgresql-10_10.23-9.pgdg14+4 postgresql-11_11.22-10.pgdg14+4 postgresql-12_12.22-4.pgdg14+3 postgresql-13_13.23-2.pgdg14+3 postgresql-14_14.24-1.pgdg14+2 postgresql-15_15.19-1.pgdg14+2 postgresql-16_16.15-1.pgdg14+2 postgresql-17_17.11-1.pgdg14+2 postgresql-18_18.6-2.pgdg14+1 postgresql-all_294~20260813.2048.gb11c0d8.pgdg14+1 postgresql-client-10_10.23-9.pgdg14+4 postgresql-client-11_11.22-10.pgdg14+4 postgresql-client-12_12.22-4.pgdg14+3 postgresql-client-13_13.23-2.pgdg14+3 postgresql-client-14_14.24-1.pgdg14+2 postgresql-client-15_15.19-1.pgdg14+2 postgresql-client-16_16.15-1.pgdg14+2 postgresql-client-17_17.11-1.pgdg14+2 postgresql-client-18_18.6-2.pgdg14+1 postgresql-client-common_294~20260813.2048.gb11c0d8.pgdg14+1 postgresql-common_294~20260813.2048.gb11c0d8.pgdg14+1 postgresql-common-dev_294~20260813.2048.gb11c0d8.pgdg14+1 postgresql-plperl-10_10.23-9.pgdg14+4 postgresql-plperl-11_11.22-10.pgdg14+4 postgresql-plperl-12_12.22-4.pgdg14+3 postgresql-plperl-13_13.23-2.pgdg14+3 postgresql-plperl-14_14.24-1.pgdg14+2 postgresql-plperl-15_15.19-1.pgdg14+2 postgresql-plperl-16_16.15-1.pgdg14+2 postgresql-plperl-17_17.11-1.pgdg14+2 postgresql-plperl-18_18.6-2.pgdg14+1 postgresql-plpython3-10_10.23-9.pgdg14+4 postgresql-plpython3-11_11.22-10.pgdg14+4 postgresql-plpython3-12_12.22-4.pgdg14+3 postgresql-plpython3-13_13.23-2.pgdg14+3 postgresql-plpython3-14_14.24-1.pgdg14+2 postgresql-plpython3-15_15.19-1.pgdg14+2 postgresql-plpython3-16_16.15-1.pgdg14+2 postgresql-plpython3-17_17.11-1.pgdg14+2 postgresql-plpython3-18_18.6-2.pgdg14+1 postgresql-pltcl-10_10.23-9.pgdg14+4 postgresql-pltcl-11_11.22-10.pgdg14+4 postgresql-pltcl-12_12.22-4.pgdg14+3 postgresql-pltcl-13_13.23-2.pgdg14+3 postgresql-pltcl-14_14.24-1.pgdg14+2 postgresql-pltcl-15_15.19-1.pgdg14+2 postgresql-pltcl-16_16.15-1.pgdg14+2 postgresql-pltcl-17_17.11-1.pgdg14+2 postgresql-pltcl-18_18.6-2.pgdg14+1 postgresql-server-dev-10_10.23-9.pgdg14+4 postgresql-server-dev-11_11.22-10.pgdg14+4 postgresql-server-dev-12_12.22-4.pgdg14+3 postgresql-server-dev-13_13.23-2.pgdg14+3 postgresql-server-dev-14_14.24-1.pgdg14+2 postgresql-server-dev-15_15.19-1.pgdg14+2 postgresql-server-dev-16_16.15-1.pgdg14+2 postgresql-server-dev-17_17.11-1.pgdg14+2 postgresql-server-dev-18_18.6-2.pgdg14+1 postgresql-server-dev-all_294~20260813.2048.gb11c0d8.pgdg14+1 preview-latex-style_13.2-1.1 procps_2:4.0.6-3 python-babel-localedata_2.17.0-2 python3_3.14.6-1 python3-alabaster_1.0.0-1 python3-babel_2.17.0-2 python3-certifi_2026.7.22+ds-1 python3-chardet_5.2.0+dfsg-2 python3-charset-normalizer_3.4.7-2 python3-commonmark_0.9.1-8 python3-dateutil_2.9.0-5 python3-debian_1.1.1 python3-defusedxml_0.7.1-3 python3-dev_3.14.6-1 python3-distro-info_1.17 python3-docutils_0.22.4+dfsg-1 python3-greenlet_3.3.2-4 python3-idna_3.18-1 python3-imagesize_2.0.0-1 python3-iniconfig_2.1.0-2 python3-jinja2_3.1.6-3 python3-linkify-it_2.1.0-2 python3-markdown-it_4.2.0-3 python3-markupsafe_3.0.3-2 python3-mdit-py-plugins_0.6.1-1 python3-mdurl_0.1.2-1 python3-minimal_3.14.6-1 python3-myst-parser_5.1.0-2 python3-numpy_1:2.4.6+ds-4 python3-numpy-dev_1:2.4.6+ds-4 python3-packaging_26.2-2 python3-pandas_2.3.3+dfsg-3 python3-pandas-lib_2.3.3+dfsg-3+b1 python3-pil_12.3.0-1 python3-pluggy_1.6.0-2 python3-pygments_2.20.0+dfsg-2 python3-pytest_9.1.1-1 python3-pytz_2025.2-7 python3-recommonmark_0.7.1+ds-9 python3-requests_2.32.5+dfsg-2 python3-roman-numerals_4.1.0-1 python3-snowballstemmer_3.1.1-1 python3-sphinx_9.1.0-6 python3-sqlalchemy_2.0.48+ds1-1 python3-typing-extensions_4.16.0-4 python3-uc-micro_2.0.0-1 python3-urllib3_2.7.0-3 python3-yaml_6.0.3-1 python3.14_3.14.6-1 python3.14-dev_3.14.6-1 python3.14-minimal_3.14.6-1 rapidjson-dev_1.1.0+dfsg2-7.6 readline-common_8.3-4 retry_1.0.6-1 rpcsvc-proto_1.4.4-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sgml-base_1.31+nmu1 shared-mime-info_2.4-5+b3 sphinx-common_9.1.0-6 sqv_1.4.0-1 ssl-cert_1.2.0 sudo_1.9.17p2-7 systemd_261.2-1 systemd-tpm_261.2-1 sysvinit-utils_3.18-1 t1utils_1.41-4 tar_1.35+dfsg-5 tex-common_6.20 tex-gyre_20180621-8 texlive-base_2026.20260711-2 texlive-binaries_2026.20260303.78225+ds-4 texlive-fonts-recommended_2026.20260711-2 texlive-latex-base_2026.20260711-2 texlive-latex-extra_2026.20260711-2 texlive-latex-recommended_2026.20260711-2 texlive-pictures_2026.20260711-2 tpm-udev_4.1.3-7 tzdata_2026c-1 ucf_3.0056 util-linux_2.42.2-2 uuid-dev_2.42.2-2 x11-common_1:7.7+26 x11proto-dev_2025.1-1 xdg-utils_1.2.1-2 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xml-core_0.21 xorg-sgml-doctools_1:1.12.1-1 xtrans-dev_1.6.0-1 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3

+------------------------------------------------------------------------------+
| Build                                        Sat, 15 Aug 2026 20:07:56 +0000 |
+------------------------------------------------------------------------------+


Unpack source
-------------

Format: 3.0 (quilt)
Source: rdkit
Binary: python3-rdkit, rdkit-doc, rdkit-data, librdkit1t64, librdkit-dev, postgresql-10-rdkit, postgresql-11-rdkit, postgresql-12-rdkit, postgresql-13-rdkit, postgresql-14-rdkit, postgresql-15-rdkit, postgresql-16-rdkit, postgresql-17-rdkit, postgresql-18-rdkit
Architecture: any all
Version: 202603.4-1.pgdg14+1
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders: Michael Banck <mbanck@debian.org>, Andrius Merkys <merkys@debian.org>, Roland Mas <lolando@debian.org>,
Homepage: http://www.rdkit.org
Standards-Version: 4.7.2
Vcs-Browser: https://salsa.debian.org/debichem-team/rdkit
Vcs-Git: https://salsa.debian.org/debichem-team/rdkit.git
Testsuite: autopkgtest
Testsuite-Triggers: dpkg-dev, postgresql-common-dev
Build-Depends: architecture-is-64-bit, architecture-is-little-endian, bison, catch2, cmake (>= 4.1.2-1), debhelper-compat (= 13), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-numpy-dev, libboost-program-options-dev, libboost-python-dev, libboost-regex-dev, libboost-thread-dev, libcairo2-dev, libcoordgen-dev, libeigen3-dev, libfreetype-dev, libinchi-dev (>= 1.07.1+dfsg-2), libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-myst-parser, python3-numpy-dev, python3-pandas, python3-pil | python3-imaging, python3-pytest, python3-recommonmark, python3-sphinx, python3-sqlalchemy, rapidjson-dev, tex-gyre, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Package-List:
 librdkit-dev deb libdevel optional arch=any
 librdkit1t64 deb libs optional arch=any
 postgresql-10-rdkit deb database optional arch=any
 postgresql-11-rdkit deb database optional arch=any
 postgresql-12-rdkit deb database optional arch=any
 postgresql-13-rdkit deb database optional arch=any
 postgresql-14-rdkit deb database optional arch=any
 postgresql-15-rdkit deb database optional arch=any
 postgresql-16-rdkit deb database optional arch=any
 postgresql-17-rdkit deb database optional arch=any
 postgresql-18-rdkit deb database optional arch=any
 python3-rdkit deb python optional arch=any
 rdkit-data deb science optional arch=all
 rdkit-doc deb doc optional arch=all
Checksums-Sha1:
 58d911662d9a4cf040331c5cdee740a7a7ddff1d 64664440 rdkit_202603.4.orig.tar.xz
 5e4f6a904f4bcda73266e207b428977d23c734d6 49424 rdkit_202603.4-1.pgdg14+1.debian.tar.xz
Checksums-Sha256:
 6fef535276a2d625682a15ee85742290227a7059cf8ca57b17149f3963cc242c 64664440 rdkit_202603.4.orig.tar.xz
 d77c2c8ab879aa964aa9a6b32773c948ee8efd3d9f3d418fd395836ee5f29692 49424 rdkit_202603.4-1.pgdg14+1.debian.tar.xz
Files:
 b2cd1dbe154e253e0afd283a87dc4bc7 64664440 rdkit_202603.4.orig.tar.xz
 3bf964e52b2322101243c42b79a1d812 49424 rdkit_202603.4-1.pgdg14+1.debian.tar.xz

dpkg-source: warning: extracting unsigned source package (rdkit_202603.4-1.pgdg14+1.dsc)
dpkg-source: info: extracting rdkit in /build/rdkit-binaries-forky-amd64/rdkit-202603.4
dpkg-source: info: unpacking rdkit_202603.4.orig.tar.xz
dpkg-source: info: unpacking rdkit_202603.4-1.pgdg14+1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying postgres_alternative_test_outputs.patch
dpkg-source: info: applying sphinx_compile_fixes.patch
dpkg-source: info: applying extra_float_digits
dpkg-source: info: applying postgres_cmakelists_fixes.patch
dpkg-source: info: applying disable_pgsql_test.patch
dpkg-source: info: applying fix_inchi_linking.patch
dpkg-source: info: applying disable_inchi_test.patch
dpkg-source: info: applying disable_python_test.patch
dpkg-source: info: applying better_enums.patch
dpkg-source: info: applying fix-shebangs.patch
dpkg-source: info: applying remove-badges.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=nocheck parallel=16
DEB_BUILD_PROFILES=pgdg forky
HOME=/sbuild-nonexistent
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PG_SUPPORTED_VERSIONS=10 11 12 13 14 15 16 17 18
PG_UPDATECONTROL=yes
SCHROOT_ALIAS_NAME=forky-pgdg-amd64-sbuild
SCHROOT_CHROOT_NAME=forky-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1002
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=forky-amd64-sbuild-2244cc8c-f3b1-46f4-bf31-149e7567ab26
SCHROOT_UID=1002
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -Ppgdg,forky -us -uc -b
dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 202603.4-1.pgdg14+1
dpkg-buildpackage: info: source distribution forky-pgdg
dpkg-buildpackage: info: source changed by PostgreSQL on Debian and Ubuntu <pgsql-pkg-debian@lists.postgresql.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
pg_buildext checkcontrol
dh clean --with python3 --buildsystem=cmake
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
find /build/rdkit-binaries-forky-amd64/rdkit-202603.4 -name "*.pyc" | xargs rm -f
rm -f -r Projects/DbCLI/testData/bzr/ rdkit/Chem/inchi.py
rm -f -r Docs/Book/_build Code/docs rdkit/docs Code/doxygen_sqlite3.db
rm -f \
Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
Code/GraphMol/SmilesParse/smiles.tab.cpp \
Code/GraphMol/SmilesParse/smiles.tab.hpp \
Code/GraphMol/Wrap/test_data/outNCI_few.sdf \
Code/GraphMol/Wrap/test_data/outSmiles.txt \
Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
Docs/Book/Install.rst \
Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
dh_auto_clean
rm -f -rf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-*
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   dh_autoreconf_clean -O--buildsystem=cmake
   dh_clean -O--buildsystem=cmake
 debian/rules binary
dh binary --with python3 --buildsystem=cmake
   dh_update_autotools_config -O--buildsystem=cmake
   dh_autoreconf -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DRDK_BUILD_PUBCHEMSHAPE_SUPPORT=OFF -DRDK_BUILD_XYZ2MOL_SUPPORT=ON -DRDK_BUILD_CHEMDRAW_SUPPORT=OFF -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DRDK_BUILD_PGSQL=ON -DRDK_PGSQL_STATIC=OFF -DPostgreSQL_CONFIG=/usr/bin/pg_config -DPostgreSQL_TYPE_INCLUDE_DIR="/usr/include/postgresql/18/server" -DCMAKE_CTEST_ARGUMENTS=--timeout=7200 -DPYTHON_EXECUTABLE=/usr/bin/python3.14 ../
	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=x86_64-linux-gnu-pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_COMPILER=/usr/bin/x86_64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=/usr/bin/x86_64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DBUILD_TESTING:BOOL=OFF -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DRDK_BUILD_PUBCHEMSHAPE_SUPPORT=OFF -DRDK_BUILD_XYZ2MOL_SUPPORT=ON -DRDK_BUILD_CHEMDRAW_SUPPORT=OFF -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DRDK_BUILD_PGSQL=ON -DRDK_PGSQL_STATIC=OFF -DPostgreSQL_CONFIG=/usr/bin/pg_config -DPostgreSQL_TYPE_INCLUDE_DIR=/usr/include/postgresql/18/server -DCMAKE_CTEST_ARGUMENTS=--timeout=7200 -DPYTHON_EXECUTABLE=/usr/bin/python3.14 ../ ..
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Inchi: /usr/lib/x86_64-linux-gnu/libinchi.so
-- Found Python3: /usr/bin/python3 (found version "3.14.6") found components: Interpreter Development.Module NumPy
Python Install directory /usr/lib/python3.14/site-packages
nbval not found, disabling the jupyter tests
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0")
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
== Using strict rotor definition
CMake Warning at Code/GraphMol/FileParsers/CMakeLists.txt:133 (find_package):
  By not providing "FindTBB.cmake" in CMAKE_MODULE_PATH this project has
  asked CMake to find a package configuration file provided by "TBB", but
  CMake did not find one.

  Could not find a package configuration file provided by "TBB" with any of
  the following names:

    TBB.cps
    tbb.cps
    TBBConfig.cmake
    tbb-config.cmake

  Add the installation prefix of "TBB" to CMAKE_PREFIX_PATH or set "TBB_DIR"
  to a directory containing one of the above files.  If "TBB" provides a
  separate development package or SDK, be sure it has been installed.


-- Found Python3: /usr/bin/python3 (found version "3.14.6") found components: Interpreter
-- Found PkgConfig: /usr/bin/x86_64-linux-gnu-pkg-config (found version "2.5.1")
-- Found Cairo: /usr/include/cairo
-- Found Freetype: /usr/lib/x86_64-linux-gnu/libfreetype.so (found version "2.14.3")
postgres: /usr/include/postgresql;/usr/include/postgresql/18/server
CMake Warning (dev) at Code/PgSQL/rdkit/CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at Code/PgSQL/rdkit/CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at Code/PgSQL/rdkit/CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (1.7s)
-- Generating done (1.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    Boost_NO_BOOST_CMAKE
    CATCH_DIR
    CMAKE_CTEST_ARGUMENTS
    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED
    PKGCONFIG_EXECUTABLE
    PYTHON_EXECUTABLE


-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu
for v in $(pg_buildext supported-versions); do \
	(mkdir -p Code/PgSQL/rdkit/build-$v && cd Code/PgSQL/rdkit/build-$v && cmake -DPostgreSQL_CONFIG=/usr/lib/postgresql/$v/bin/pg_config -DRDK_PGSQL_STATIC=OFF -DPostgreSQL_TYPE_INCLUDE_DIR="/usr/include/postgresql/$v/server" -DCMAKE_VERBOSE_MAKEFILE=1 -DRDKit_CodeDir=../../../Code ../); \
done
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/10/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-10
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/11/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/12/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-12
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/13/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-13
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/14/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-14
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/15/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-15
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/16/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-16
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/17/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-17
-- The C compiler identification is GNU 15.3.0
-- The CXX compiler identification is GNU 15.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PostgreSQL: /usr/lib/x86_64-linux-gnu/libpq.so (found version "18.6")
postgres: /usr/include/postgresql;/usr/include/postgresql/18/server
CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:313 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-18
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_auto_build
	cd obj-x86_64-linux-gnu && make -j16 INSTALL="install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/rdkit-binaries-forky-amd64/rdkit-202603.4 -B/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/CMakeFiles /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu//CMakeFiles/progress.marks
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/GA && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Dga_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT External/GA/CMakeFiles/ga.dir/ga/StringChromosome.cpp.o -MF CMakeFiles/ga.dir/ga/StringChromosome.cpp.o.d -o CMakeFiles/ga.dir/ga/StringChromosome.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/GA/ga/StringChromosome.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_BOOST_STACKTRACE -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/RDGeneral/CMakeFiles/RDGeneral.dir/utils.cpp.o -MF CMakeFiles/RDGeneral.dir/utils.cpp.o.d -o CMakeFiles/RDGeneral.dir/utils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/utils.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_BOOST_STACKTRACE -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/RDGeneral/CMakeFiles/RDGeneral.dir/RDGeneralExceptions.cpp.o -MF CMakeFiles/RDGeneral.dir/RDGeneralExceptions.cpp.o.d -o CMakeFiles/RDGeneral.dir/RDGeneralExceptions.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/RDGeneralExceptions.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hc.c.o -MF CMakeFiles/hc.dir/hc.c.o.d -o CMakeFiles/hc.dir/hc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ML/Cluster/Murtagh/hc.c
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/GA && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Dga_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT External/GA/CMakeFiles/ga.dir/ga/Chromosome.cpp.o -MF CMakeFiles/ga.dir/ga/Chromosome.cpp.o.d -o CMakeFiles/ga.dir/ga/Chromosome.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/GA/ga/Chromosome.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_BOOST_STACKTRACE -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/RDGeneral/CMakeFiles/RDGeneral.dir/RDLog.cpp.o -MF CMakeFiles/RDGeneral.dir/RDLog.cpp.o.d -o CMakeFiles/RDGeneral.dir/RDLog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/RDLog.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/hc.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/hc.dir/link.d -Wl,-soname,libRDKithc.so.1 -o ../../../../lib/libRDKithc.so.1.2026.03.4 CMakeFiles/hc.dir/hc.c.o CMakeFiles/hc.dir/hcdriver.c.o  /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libRDKithc.so.1.2026.03.4 ../../../../lib/libRDKithc.so.1 ../../../../lib/libRDKithc.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  0%] Built target hc
[  0%] Linking CXX shared library ../../lib/libRDKitga.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/GA && /usr/bin/cmake -E cmake_link_script CMakeFiles/ga.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ga.dir/link.d -Wl,-soname,libRDKitga.so.1 -o ../../lib/libRDKitga.so.1.2026.03.4 CMakeFiles/ga.dir/ga/StringChromosome.cpp.o CMakeFiles/ga.dir/ga/Chromosome.cpp.o CMakeFiles/ga.dir/ga/IntegerStringChromosomePolicy.cpp.o CMakeFiles/ga.dir/ga/BinaryStringChromosomePolicy.cpp.o CMakeFiles/ga.dir/util/RandomUtil.cpp.o CMakeFiles/ga.dir/util/Util.cpp.o  /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/GA && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitga.so.1.2026.03.4 ../../lib/libRDKitga.so.1 ../../lib/libRDKitga.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  0%] Built target ga
[  1%] Linking CXX static library librdkitCatch.a
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -P CMakeFiles/rdkitCatch.dir/cmake_clean_target.cmake
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdkitCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ar qc librdkitCatch.a CMakeFiles/rdkitCatch.dir/catch_main.cpp.o
/usr/bin/x86_64-linux-gnu-ranlib librdkitCatch.a
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  1%] Built target rdkitCatch
[  2%] Linking CXX shared library ../../lib/libRDKitRDStreams.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDStreams && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDStreams.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RDStreams.dir/link.d -Wl,-soname,libRDKitRDStreams.so.1 -o ../../lib/libRDKitRDStreams.so.1.2026.03.4 CMakeFiles/RDStreams.dir/streams.cpp.o  /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDStreams && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDStreams.so.1.2026.03.4 ../../lib/libRDKitRDStreams.so.1 ../../lib/libRDKitRDStreams.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  2%] Built target RDStreams
[  2%] Linking CXX shared library ../../lib/libRDKitRDGeneral.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeneral.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RDGeneral.dir/link.d -Wl,-soname,libRDKitRDGeneral.so.1 -o ../../lib/libRDKitRDGeneral.so.1.2026.03.4 CMakeFiles/RDGeneral.dir/Invariant.cpp.o CMakeFiles/RDGeneral.dir/types.cpp.o CMakeFiles/RDGeneral.dir/utils.cpp.o CMakeFiles/RDGeneral.dir/RDGeneralExceptions.cpp.o CMakeFiles/RDGeneral.dir/RDLog.cpp.o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o CMakeFiles/RDGeneral.dir/versions.cpp.o  -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  2%] Built target RDGeneral
make  -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
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make  -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
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make  -f Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake "--color=" DataStructs
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/EigenSolvers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/EigenSolvers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake "--color=" EigenSolvers
make  -f Code/RDGeneral/CMakeFiles/logTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/logTestsCatch.dir/depend
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDBoost /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake "--color=" RDBoost
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake "--color=" testDict
make  -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake "--color=" testRDValue
make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/DependInfo.cmake "--color=" testConcurrentQueue
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/DependInfo.cmake "--color=" dictTestsCatch
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral/CMakeFiles/logTestsCatch.dir/DependInfo.cmake "--color=" logTestsCatch
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake "--color=" testMatrices
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Catalogs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake "--color=" Catalogs
make  -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake "--color=" SimDivPickers
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Query /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Query /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake "--color=" testQuery
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataManip/MetricMatrixCalc /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataManip/MetricMatrixCalc /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake "--color=" testMatCalc
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/DistPicker.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/python3.14 -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o -MF CMakeFiles/RDBoost.dir/Wrap.cpp.o.d -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDBoost/Wrap.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/EigenSolvers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -MF CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o.d -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o -MF CMakeFiles/DataStructs.dir/BitVect.cpp.o.d -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVect.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o -MF CMakeFiles/testRDValue.dir/testRDValue.cpp.o.d -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/testRDValue.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -MF CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o.d -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/SparseBitVect.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/MaxMinPicker.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/RDGeneral/CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -MF CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o.d -o CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/catch_logs.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o -MF CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o.d -o CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/catch_dict.cpp
[  3%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/HierarchicalClusterPicker.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Catalogs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o -MF CMakeFiles/Catalogs.dir/Catalog.cpp.o.d -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs/Catalog.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o -MF CMakeFiles/testMatrices.dir/testMatrices.cpp.o.d -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/testMatrices.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Query && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Query/CMakeFiles/testQuery.dir/test.cpp.o -MF CMakeFiles/testQuery.dir/test.cpp.o.d -o CMakeFiles/testQuery.dir/test.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Query/test.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -MF CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o.d -o CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/testConcurrentQueue.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataManip/MetricMatrixCalc && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -MF CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o.d -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o -MF CMakeFiles/testDict.dir/testDict.cpp.o.d -o CMakeFiles/testDict.dir/testDict.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/testDict.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o -MF CMakeFiles/DataStructs.dir/base64.cpp.o.d -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/base64.cpp
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o -MF CMakeFiles/DataStructs.dir/BitOps.cpp.o.d -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitOps.cpp
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -MF CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o.d -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/DiscreteDistMat.cpp
[  5%] Linking CXX shared library ../../lib/libRDKitCatalogs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Catalogs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Catalogs.dir/link.txt --verbose=1
[  5%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
[  5%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Catalogs.dir/link.d -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2026.03.4 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SimDivPickers.dir/link.d -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2026.03.4 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o  ../../lib/libRDKithc.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2026.03.4 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
[  5%] Built target Catalogs
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -MF CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o.d -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/DiscreteValueVect.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target SimDivPickers
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o -MF CMakeFiles/DataStructs.dir/FPBReader.cpp.o.d -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/FPBReader.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/EigenSolvers.dir/link.d -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o  ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target EigenSolvers
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake "--color=" testSimDivPickers
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -MF CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o.d -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/MultiFPBReader.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -MF CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o.d -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/testPickers.cpp
[  5%] Linking CXX executable testConcurrentQueue
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConcurrentQueue.dir/link.txt --verbose=1
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/RealValueVect.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/RealValueVect.cpp.o -MF CMakeFiles/DataStructs.dir/RealValueVect.cpp.o.d -o CMakeFiles/DataStructs.dir/RealValueVect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/RealValueVect.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testConcurrentQueue.dir/link.d CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -o testConcurrentQueue  librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target testConcurrentQueue
[  5%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RDBoost.dir/link.d -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2026.03.4 CMakeFiles/RDBoost.dir/Wrap.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
[  5%] Linking CXX executable logTestsCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/logTestsCatch.dir/link.txt --verbose=1
[  5%] Built target RDBoost
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDBoost/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake "--color=" rdBase
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ML/Cluster/Murtagh /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake "--color=" Clustering
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o
[  5%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o -MF CMakeFiles/rdBase.dir/RDBase.cpp.o.d -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDBoost/Wrap/RDBase.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Cluster/Murtagh && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o -MF CMakeFiles/Clustering.dir/Clustering.cpp.o.d -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ML/Cluster/Murtagh/Clustering.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/logTestsCatch.dir/link.d CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -o logTestsCatch  librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target logTestsCatch
[  5%] Linking CXX executable testQuery
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Query && /usr/bin/cmake -E cmake_link_script CMakeFiles/testQuery.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testQuery.dir/link.d CMakeFiles/testQuery.dir/test.cpp.o -o testQuery  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target testQuery
[  5%] Linking CXX executable testMatrices
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMatrices.dir/link.d CMakeFiles/testMatrices.dir/testMatrices.cpp.o -o testMatrices  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target testMatrices
[  5%] Linking CXX executable dictTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/dictTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/dictTestsCatch.dir/link.d CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o -o dictTestsCatch  librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target dictTestsCatch
[  5%] Linking CXX executable testSimDivPickers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSimDivPickers.dir/link.d CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -o testSimDivPickers  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSimDivPickers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKithc.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target testSimDivPickers
[  5%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DataStructs.dir/link.d -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2026.03.4 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o CMakeFiles/DataStructs.dir/RealValueVect.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  5%] Built target DataStructs
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make  -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make  -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make  -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
make  -f Code/DataStructs/CMakeFiles/catchDataStructs.dir/build.make Code/DataStructs/CMakeFiles/catchDataStructs.dir/depend
make  -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake "--color=" RDGeometryLib
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake "--color=" testDataStructs
make  -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake "--color=" testFPB
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/DataStructs/CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -MF CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o.d -o CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/testDatastructs.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -MF CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o.d -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/testMultiFPB.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform2D.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -MF CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o.d -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform3D.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/InfoTheory && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -MF CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o.d -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ML/InfoTheory/InfoBitRanker.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o -MF CMakeFiles/RDGeometryLib.dir/point.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/point.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/catch_tests.cpp
[  6%] Building CXX object Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o
[  7%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o -MF CMakeFiles/testFPB.dir/testFPB.cpp.o.d -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/testFPB.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
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[  7%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/RealValueVect.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/RealValueVect.cpp.o -MF CMakeFiles/cDataStructs.dir/RealValueVect.cpp.o.d -o CMakeFiles/cDataStructs.dir/RealValueVect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/Wrap/RealValueVect.cpp
[  7%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformGrid3D.cpp
[  7%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/Wrap/LeaderPicker.cpp
[  7%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[  7%] Linking CXX executable catchDataStructs
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/catchDataStructs.dir/link.txt --verbose=1
[  7%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/InfoTheory.dir/link.d -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2026.03.4 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2026.03.4 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
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[  7%] Built target InfoTheory
[  7%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/catchDataStructs.dir/link.d CMakeFiles/catchDataStructs.dir/catch_tests.cpp.o -o catchDataStructs  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[  7%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformRealValueGrid3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformRealValueGrid3D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/UniformRealValueGrid3D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/UniformRealValueGrid3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformRealValueGrid3D.cpp
[  7%] Linking CXX executable pickersTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/pickersTestsCatch.dir/link.txt --verbose=1
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[  7%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/InfoTheory/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -MF CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o.d -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
[  7%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
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/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RDGeometryLib.dir/link.d -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformRealValueGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o  ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMultiFPB.dir/link.d CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -o testMultiFPB  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake "--color=" GraphMol
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o -MF CMakeFiles/GraphMol.dir/Atom.cpp.o.d -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Atom.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake "--color=" Alignment
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[  9%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment && /usr/bin/x86_64-linux-gnu-g++ -DAlignment_EXPORTS -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o -MF CMakeFiles/Alignment.dir/AlignPoints.cpp.o.d -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/AlignPoints.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake "--color=" testTransforms
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o -MF CMakeFiles/testTransforms.dir/testTransforms.cpp.o.d -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/testTransforms.cpp
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -MF CMakeFiles/GraphMol.dir/QueryAtom.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryAtom.cpp
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o -MF CMakeFiles/GraphMol.dir/QueryBond.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryBond.cpp
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[  9%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
[  9%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o -MF CMakeFiles/testGrid.dir/testGrid.cpp.o.d -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/testGrid.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdInfoTheory.dir/link.d  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o  ../../../../lib/libRDKitInfoTheory.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Built target rdInfoTheory
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o -MF CMakeFiles/GraphMol.dir/Bond.cpp.o.d -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Bond.cpp
[  9%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Alignment.dir/link.d -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2026.03.4 CMakeFiles/Alignment.dir/AlignPoints.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Built target Alignment
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o -MF CMakeFiles/GraphMol.dir/MolOps.cpp.o.d -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.cpp
[  9%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/cQuantize.dir/link.d  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o  ../../../lib/libRDKitInfoTheory.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Built target cQuantize
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o -MF CMakeFiles/GraphMol.dir/FindRings.cpp.o.d -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindRings.cpp
make  -f Code/Geometry/CMakeFiles/testRealValueGrid.dir/build.make Code/Geometry/CMakeFiles/testRealValueGrid.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/CMakeFiles/testRealValueGrid.dir/DependInfo.cmake "--color=" testRealValueGrid
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Building CXX object Code/Geometry/CMakeFiles/testRealValueGrid.dir/testRealValueGrid.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Geometry/CMakeFiles/testRealValueGrid.dir/testRealValueGrid.cpp.o -MF CMakeFiles/testRealValueGrid.dir/testRealValueGrid.cpp.o.d -o CMakeFiles/testRealValueGrid.dir/testRealValueGrid.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/testRealValueGrid.cpp
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake "--color=" geometryTestsCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Building CXX object Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/catch_tests.cpp
[  9%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdSimDivPickers.dir/link.d  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o  ../../../lib/libRDKitSimDivPickers.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKithc.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[  9%] Built target rdSimDivPickers
[  9%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o -MF CMakeFiles/GraphMol.dir/ROMol.cpp.o.d -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ROMol.cpp
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindRings.cpp: In function ‘void RDKit::MolOps::findRingFamilies(const RDKit::ROMol&, bool, bool)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindRings.cpp:1218:36: warning: unused parameter ‘mol’ [-Wunused-parameter]
 1218 | void findRingFamilies(const ROMol &mol, bool includeDativeBonds,
      |                       ~~~~~~~~~~~~~^~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindRings.cpp:1218:46: warning: unused parameter ‘includeDativeBonds’ [-Wunused-parameter]
 1218 | void findRingFamilies(const ROMol &mol, bool includeDativeBonds,
      |                                         ~~~~~^~~~~~~~~~~~~~~~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindRings.cpp:1219:28: warning: unused parameter ‘includeHydrogenBonds’ [-Wunused-parameter]
 1219 |                       bool includeHydrogenBonds) {
      |                       ~~~~~^~~~~~~~~~~~~~~~~~~~
[  9%] Linking CXX executable testTransforms
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake "--color=" rdGeometry
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 10%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o -MF CMakeFiles/rdGeometry.dir/Point.cpp.o.d -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Wrap/Point.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testTransforms.dir/link.d CMakeFiles/testTransforms.dir/testTransforms.cpp.o -o testTransforms  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 10%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o -MF CMakeFiles/GraphMol.dir/RWMol.cpp.o.d -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RWMol.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o -MF CMakeFiles/testConrec.dir/testConrec.cpp.o.d -o CMakeFiles/testConrec.dir/testConrec.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/testConrec.cpp
[ 10%] Linking CXX executable testGrid
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
[ 10%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -MF CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o.d -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Wrap/UniformGrid3D.cpp
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 10%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformRealValueGrid3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformRealValueGrid3D.cpp.o -MF CMakeFiles/rdGeometry.dir/UniformRealValueGrid3D.cpp.o.d -o CMakeFiles/rdGeometry.dir/UniformRealValueGrid3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Wrap/UniformRealValueGrid3D.cpp
[ 10%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -MF CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o.d -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Wrap/rdGeometry.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o -MF CMakeFiles/testAlignment.dir/testAlignment.cpp.o.d -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/testAlignment.cpp
[ 10%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -MF CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o.d -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PeriodicTable.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/geometryTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/geometryTestsCatch.dir/link.d CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -o geometryTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o -MF CMakeFiles/GraphMol.dir/atomic_data.cpp.o.d -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/atomic_data.cpp
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/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRealValueGrid.dir/link.d CMakeFiles/testRealValueGrid.dir/testRealValueGrid.cpp.o -o testRealValueGrid  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/libCatch2.a -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
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[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o -MF CMakeFiles/GraphMol.dir/QueryOps.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryOps.cpp
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/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testDataStructs.dir/link.d CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -o testDataStructs  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 11%] Built target testDataStructs
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o -MF CMakeFiles/GraphMol.dir/MolPickler.cpp.o.d -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolPickler.cpp
[ 11%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake "--color=" rdAlignment
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[ 11%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Alignment/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -MF CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o.d -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/cDataStructs.dir/link.d  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/RealValueVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 11%] Built target cDataStructs
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o -MF CMakeFiles/GraphMol.dir/Canon.cpp.o.d -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Canon.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Features /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Features /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Features/CMakeFiles/testBaseFeatures.dir/DependInfo.cmake "--color=" testBaseFeatures
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 11%] Building CXX object Code/Features/CMakeFiles/testBaseFeatures.dir/testFeatures.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Features && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Features/CMakeFiles/testBaseFeatures.dir/testFeatures.cpp.o -MF CMakeFiles/testBaseFeatures.dir/testFeatures.cpp.o.d -o CMakeFiles/testBaseFeatures.dir/testFeatures.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Features/testFeatures.cpp
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake "--color=" ChemicalFeatures
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 11%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -MF CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o.d -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/FreeChemicalFeature.cpp
[ 11%] Linking CXX executable testConrec
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConrec.dir/link.txt --verbose=1
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -MF CMakeFiles/GraphMol.dir/AtomIterators.cpp.o.d -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/AtomIterators.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testConrec.dir/link.d CMakeFiles/testConrec.dir/testConrec.cpp.o -o testConrec  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o -MF CMakeFiles/GraphMol.dir/BondIterators.cpp.o.d -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/BondIterators.cpp
[ 11%] Linking CXX executable testAlignment
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/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAlignment.dir/link.d CMakeFiles/testAlignment.dir/testAlignment.cpp.o -o testAlignment  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -MF CMakeFiles/GraphMol.dir/Aromaticity.cpp.o.d -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Aromaticity.cpp
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o -MF CMakeFiles/GraphMol.dir/Kekulize.cpp.o.d -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Kekulize.cpp
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -MF CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o.d -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ConjugHybrid.cpp
[ 11%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ChemicalFeatures.dir/link.d -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2026.03.4 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2026.03.4 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 11%] Built target ChemicalFeatures
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o -MF CMakeFiles/GraphMol.dir/AddHs.cpp.o.d -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/AddHs.cpp
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake "--color=" testChemicalFeatures
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 11%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -MF CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o.d -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/testChemicalFeatures.cpp
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o -MF CMakeFiles/GraphMol.dir/Matrices.cpp.o.d -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Matrices.cpp
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o -MF CMakeFiles/GraphMol.dir/Chirality.cpp.o.d -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Chirality.cpp
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[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o -MF CMakeFiles/GraphMol.dir/RingInfo.cpp.o.d -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RingInfo.cpp
[ 12%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
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[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o -MF CMakeFiles/GraphMol.dir/Conformer.cpp.o.d -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Conformer.cpp
[ 12%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
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[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
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[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
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[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -MF CMakeFiles/GraphMol.dir/StereoGroup.cpp.o.d -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/StereoGroup.cpp
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o -MF CMakeFiles/GraphMol.dir/new_canon.cpp.o.d -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/new_canon.cpp
[ 12%] Linking CXX executable testChemicalFeatures
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testChemicalFeatures.dir/link.d CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -o testChemicalFeatures  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitChemicalFeatures.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 12%] Built target testChemicalFeatures
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -MF CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o.d -o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstanceGroup.cpp
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindStereo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/FindStereo.cpp.o -MF CMakeFiles/GraphMol.dir/FindStereo.cpp.o.d -o CMakeFiles/GraphMol.dir/FindStereo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FindStereo.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o -MF CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o.d -o CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MonomerInfo.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o -MF CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o.d -o CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/NontetrahedralStereo.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atropisomers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Atropisomers.cpp.o -MF CMakeFiles/GraphMol.dir/Atropisomers.cpp.o.d -o CMakeFiles/GraphMol.dir/Atropisomers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Atropisomers.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o -MF CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o.d -o CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/WedgeBonds.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolProps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MolProps.cpp.o -MF CMakeFiles/GraphMol.dir/MolProps.cpp.o.d -o CMakeFiles/GraphMol.dir/MolProps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolProps.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Subset.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Subset.cpp.o -MF CMakeFiles/GraphMol.dir/Subset.cpp.o.d -o CMakeFiles/GraphMol.dir/Subset.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subset.cpp
[ 13%] Linking CXX shared module ../../../rdkit/rdBase.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdBase.dir/link.d  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o  ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 13%] Built target rdBase
[ 13%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/GraphMol.dir/link.d -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2026.03.4 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o CMakeFiles/GraphMol.dir/FindStereo.cpp.o CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o CMakeFiles/GraphMol.dir/Atropisomers.cpp.o CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o CMakeFiles/GraphMol.dir/MolProps.cpp.o CMakeFiles/GraphMol.dir/Subset.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 13%] Built target GraphMol
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -MF CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o.d -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/GasteigerParams.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -MF CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o.d -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs/Subgraphs.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -MF CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o.d -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o -MF CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o.d -o CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/CIPMol.cpp
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[ 14%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
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[ 14%] Building CXX object Code/GraphMol/CMakeFiles/molrangesTestsCatch.dir/catch_molranges.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -MF CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o.d -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms/MolTransforms.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -MF CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o.d -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/tableTestsCatch.dir/catch_periodictable.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGenericGroups_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GENERICGROUPS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o -MF CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o.d -o CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GenericGroups/GenericGroups.cpp
[ 14%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/molrangesTestsCatch.dir/catch_molranges.cpp.o -MF CMakeFiles/molrangesTestsCatch.dir/catch_molranges.cpp.o.d -o CMakeFiles/molrangesTestsCatch.dir/catch_molranges.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_molranges.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/tableTestsCatch.dir/catch_periodictable.cpp.o -MF CMakeFiles/tableTestsCatch.dir/catch_periodictable.cpp.o.d -o CMakeFiles/tableTestsCatch.dir/catch_periodictable.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_periodictable.cpp
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[ 14%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -MF CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o.d -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o -MF CMakeFiles/rdqueries.dir/rdqueries.cpp.o.d -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdqueries.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_JSON_STATIC_LINK -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o -MF CMakeFiles/MolInterchange.dir/Parser.cpp.o.d -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/Parser.cpp
[ 15%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o -MF CMakeFiles/SLNParse.dir/SLNParse.cpp.o.d -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/SLNParse.cpp
[ 15%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -MF CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o.d -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 15%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_JSON_STATIC_LINK -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o -MF CMakeFiles/MolInterchange.dir/Writer.cpp.o.d -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/Writer.cpp
[ 15%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o -MF CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o.d -o CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/CIPLabeler.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
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[ 16%] Built target tableTestsCatch
[ 16%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -MF CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o.d -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
[ 16%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -MF CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o.d -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/SLNAttribs.cpp
[ 16%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
[ 16%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o -MF CMakeFiles/SLNParse.dir/sln.tab.cpp.o.d -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/sln.tab.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Trajectory.dir/link.d -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2026.03.4 CMakeFiles/Trajectory.dir/Trajectory.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Built target Trajectory
[ 16%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -MF CMakeFiles/SLNParse.dir/lex.yysln.cpp.o.d -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/lex.yysln.cpp
[ 16%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Subgraphs.dir/link.d -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Built target Subgraphs
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 16%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolCatalog.dir/link.d -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2026.03.4 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2026.03.4 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Built target MolCatalog
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake "--color=" rdPartialCharges
[ 16%] Linking CXX executable molrangesTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molrangesTestsCatch.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -MF CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o.d -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molrangesTestsCatch.dir/link.d CMakeFiles/molrangesTestsCatch.dir/catch_molranges.cpp.o -o molrangesTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitGraphMol.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Built target molrangesTestsCatch
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmilesWrite.cpp
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -MF CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmartsWrite.cpp
[ 16%] Linking CXX shared library ../../../lib/libRDKitGenericGroups.so
[ 16%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericGroups.dir/link.txt --verbose=1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/GenericGroups.dir/link.d -Wl,-soname,libRDKitGenericGroups.so.1 -o ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1 ../../../lib/libRDKitGenericGroups.so
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolTransforms.dir/link.d -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 16%] Built target GenericGroups
[ 16%] Built target MolTransforms
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -MF CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o.d -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CanonicalizeStereoGroups.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CanonicalizeStereoGroups.cpp.o -MF CMakeFiles/SmilesParse.dir/CanonicalizeStereoGroups.cpp.o.d -o CMakeFiles/SmilesParse.dir/CanonicalizeStereoGroups.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/CanonicalizeStereoGroups.cpp
[ 16%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesJSONParsers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesJSONParsers.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesJSONParsers.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesJSONParsers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmilesJSONParsers.cpp
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
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[ 16%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
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[ 16%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Digraph.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Digraph.cpp.o -MF CMakeFiles/CIPLabeler.dir/Digraph.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Digraph.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Digraph.cpp
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[ 16%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
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[ 16%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdChemicalFeatures.dir/link.d  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../../lib/libRDKitChemicalFeatures.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 16%] Built target rdChemicalFeatures
[ 17%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -MF CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o.d -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/smarts.tab.cpp
[ 17%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdPartialCharges.dir/link.d  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o  ../../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 17%] Built target rdPartialCharges
[ 17%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Node.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Node.cpp.o -MF CMakeFiles/CIPLabeler.dir/Node.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Node.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Node.cpp
[ 17%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -MF CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o.d -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 17%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SLNParse.dir/link.d -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2026.03.4 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2026.03.4 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 17%] Built target SLNParse
[ 17%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -MF CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o.d -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/smiles.tab.cpp
[ 18%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Edge.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Edge.cpp.o -MF CMakeFiles/CIPLabeler.dir/Edge.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Edge.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Edge.cpp
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake "--color=" SubstructMatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 19%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -MF CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o.d -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.cpp
[ 19%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -MF CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o.d -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
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[ 19%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -MF CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o.d -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 19%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Sort.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Sort.cpp.o -MF CMakeFiles/CIPLabeler.dir/Sort.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Sort.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Sort.cpp
[ 19%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -MF CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o.d -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
[ 19%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -MF CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o.d -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
[ 19%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -MF CMakeFiles/Optimizer.dir/LinearSearch.cpp.o.d -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/LinearSearch.cpp
[ 19%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/Configuration.cpp
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[ 19%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -MF CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o.d -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
[ 19%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o
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[ 20%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Built target rdqueries
[ 20%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -MF CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o.d -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
[ 20%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdtrajectory.dir/link.d  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Built target rdtrajectory
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp
[ 20%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Optimizer.dir/link.d -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2026.03.4 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/AtropisomerBond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/AtropisomerBond.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/AtropisomerBond.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/AtropisomerBond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/AtropisomerBond.cpp
[ 20%] Built target Optimizer
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule1a.cpp
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake "--color=" rdSLNParse
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -MF CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o.d -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake "--color=" testOptimizer
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Numerics/Optimizer && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -MF CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o.d -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/testOptimizer.cpp
[ 20%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolCatalog.dir/link.d  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o  ../../../../lib/libRDKitMolCatalog.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Built target rdMolCatalog
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule1b.cpp
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake "--color=" ForceField
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o -MF CMakeFiles/ForceField.dir/ForceField.cpp.o.d -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/ForceField.cpp
[ 20%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/FiniteDifference.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/FiniteDifference.cpp.o -MF CMakeFiles/ForceField.dir/FiniteDifference.cpp.o.d -o CMakeFiles/ForceField.dir/FiniteDifference.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/FiniteDifference.cpp
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule2.cpp
[ 20%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/AngleConstraint.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/AngleConstraint.cpp.o -MF CMakeFiles/ForceField.dir/AngleConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/AngleConstraint.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraint.cpp
[ 20%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule3.cpp
[ 20%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/AngleConstraints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/AngleConstraints.cpp.o -MF CMakeFiles/ForceField.dir/AngleConstraints.cpp.o.d -o CMakeFiles/ForceField.dir/AngleConstraints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.cpp
[ 20%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/DistanceConstraint.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/DistanceConstraint.cpp.o -MF CMakeFiles/ForceField.dir/DistanceConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/DistanceConstraint.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/DistanceConstraint.cpp
[ 20%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ShapeHelpers.dir/link.d -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2026.03.4 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2026.03.4 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 20%] Built target ShapeHelpers
[ 21%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule4a.cpp
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake "--color=" rdShapeHelpers
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[ 22%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/TorsionConstraint.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -MF CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Inversion.cpp
[ 22%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
[ 22%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdSLNParse.dir/link.d  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o  ../../../../lib/libRDKitSLNParse.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 22%] Built target rdSLNParse
[ 22%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule5.cpp
[ 22%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule5New.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SmilesParse.dir/link.d -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/CanonicalizeStereoGroups.cpp.o CMakeFiles/SmilesParse.dir/SmilesJSONParsers.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 22%] Built target SmilesParse
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake "--color=" graphmolcpTest
[ 22%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversions.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversions.cpp.o -MF CMakeFiles/ForceField.dir/UFF/Inversions.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/Inversions.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Inversions.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -MF CMakeFiles/graphmolcpTest.dir/cptest.cpp.o.d -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/cptest.cpp
[ 22%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule6.cpp
[ 22%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SubstructMatch.dir/link.d -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o  ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 22%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
[ 22%] Built target SubstructMatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake "--color=" graphmolIterTest
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make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -MF CMakeFiles/graphmolIterTest.dir/itertest.cpp.o.d -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/itertest.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2026.03.4 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/BondStretch.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/StretchBend.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/molbundleTestsCatch.dir/catch_molbundle.cpp.o -MF CMakeFiles/molbundleTestsCatch.dir/catch_molbundle.cpp.o.d -o CMakeFiles/molbundleTestsCatch.dir/catch_molbundle.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_molbundle.cpp
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[ 24%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
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/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/CIPLabeler.dir/link.d -Wl,-soname,libRDKitCIPLabeler.so.1 -o ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o CMakeFiles/CIPLabeler.dir/Mancude.cpp.o CMakeFiles/CIPLabeler.dir/Digraph.cpp.o CMakeFiles/CIPLabeler.dir/Node.cpp.o CMakeFiles/CIPLabeler.dir/Edge.cpp.o CMakeFiles/CIPLabeler.dir/Sort.cpp.o CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o CMakeFiles/CIPLabeler.dir/configs/AtropisomerBond.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1 ../../../lib/libRDKitCIPLabeler.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Built target CIPLabeler
[ 25%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
make  -f Code/GraphMol/SmilesParse/CMakeFiles/v2smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/v2smiTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse/CMakeFiles/v2smiTestCatch.dir/DependInfo.cmake "--color=" v2smiTestCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/v2smiTestCatch.dir/v2catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/v2smiTestCatch.dir/v2catch_tests.cpp.o -MF CMakeFiles/v2smiTestCatch.dir/v2catch_tests.cpp.o.d -o CMakeFiles/v2smiTestCatch.dir/v2catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/v2catch_tests.cpp
[ 25%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
[ 25%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterCatalogRunner.cpp
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake "--color=" testSubgraphs1
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[ 25%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/testSubgraphs1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/testSubgraphs1.cpp.o -MF CMakeFiles/testSubgraphs1.dir/testSubgraphs1.cpp.o.d -o CMakeFiles/testSubgraphs1.dir/testSubgraphs1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs/testSubgraphs1.cpp
[ 25%] Linking CXX executable graphmolcpTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolcpTest.dir/link.d CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -o graphmolcpTest  ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Built target graphmolcpTest
[ 25%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
[ 25%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdShapeHelpers.dir/link.d  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o  ../../../../lib/libRDKitShapeHelpers.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Built target rdShapeHelpers
[ 25%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/Nonbonded.cpp
[ 25%] Linking CXX executable graphmolMemTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
[ 25%] Linking CXX executable graphmolIterTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolMemTest1.dir/link.d CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -o graphmolMemTest1  ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Built target graphmolMemTest1
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake "--color=" testSubgraphs2
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/testSubgraphs2.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/testSubgraphs2.cpp.o -MF CMakeFiles/testSubgraphs2.dir/testSubgraphs2.cpp.o.d -o CMakeFiles/testSubgraphs2.dir/testSubgraphs2.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs/testSubgraphs2.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolIterTest.dir/link.d CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -o graphmolIterTest  ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 25%] Built target graphmolIterTest
[ 26%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -MF CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
[ 26%] Linking CXX executable smiTest2
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
make  -f Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/DependInfo.cmake "--color=" subgraphsCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Subgraphs/catch_tests.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/smiTest2.dir/link.d CMakeFiles/smiTest2.dir/test2.cpp.o -o smiTest2  ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Built target smiTest2
[ 26%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/Params.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/Params.cpp
[ 26%] Linking CXX executable moliteratorTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/moliteratorTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/moliteratorTestsCatch.dir/link.d CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o -o moliteratorTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Built target moliteratorTestsCatch
make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake "--color=" FragCatalog
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make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
make  -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake "--color=" testPartialCharges
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o -MF CMakeFiles/testPartialCharges.dir/test1.cpp.o.d -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/test1.cpp
[ 26%] Linking CXX executable queryTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/queryTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/queryTestsCatch.dir/link.d CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o -o queryTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 26%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
[ 26%] Linking CXX executable molbundleTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molbundleTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molbundleTestsCatch.dir/link.d CMakeFiles/molbundleTestsCatch.dir/catch_molbundle.cpp.o -o molbundleTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 26%] Built target molbundleTestsCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake "--color=" MolChemicalFeatures
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 26%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
[ 27%] Linking CXX executable v2smiTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/v2smiTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/v2smiTestCatch.dir/link.d CMakeFiles/v2smiTestCatch.dir/v2catch_tests.cpp.o -o v2smiTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 27%] Built target v2smiTestCatch
[ 27%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
make  -f Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/build.make Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/DependInfo.cmake "--color=" GaussianShape
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/build.make Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 27%] Building CXX object Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/GaussianShape.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGaussianShape_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GAUSSIANSHAPE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/GaussianShape.cpp.o -MF CMakeFiles/GaussianShape.dir/GaussianShape.cpp.o.d -o CMakeFiles/GaussianShape.dir/GaussianShape.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/GaussianShape.cpp
[ 27%] Building CXX object Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/ShapeInput.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGaussianShape_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GAUSSIANSHAPE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/ShapeInput.cpp.o -MF CMakeFiles/GaussianShape.dir/ShapeInput.cpp.o.d -o CMakeFiles/GaussianShape.dir/ShapeInput.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeInput.cpp
[ 28%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
[ 29%] Linking CXX executable subgraphsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/subgraphsCatch.dir/link.txt --verbose=1
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[ 29%] Building CXX object Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/SingleConformerAlignment.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGaussianShape_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GAUSSIANSHAPE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GaussianShape/CMakeFiles/GaussianShape.dir/SingleConformerAlignment.cpp.o -MF CMakeFiles/GaussianShape.dir/SingleConformerAlignment.cpp.o.d -o CMakeFiles/GaussianShape.dir/SingleConformerAlignment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/SingleConformerAlignment.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testPartialCharges.dir/link.d CMakeFiles/testPartialCharges.dir/test1.cpp.o -o testPartialCharges  ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 30%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatParams.cpp
[ 30%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
[ 30%] Linking CXX executable testSubgraphs1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCIPLabeler_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o -MF CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o.d -o CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Wrap/rdCIPLabeler.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSubgraphs1.dir/link.d CMakeFiles/testSubgraphs1.dir/testSubgraphs1.cpp.o -o testSubgraphs1  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 30%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -MF CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
[ 30%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 30%] Linking CXX executable testSubgraphs2
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
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[ 30%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -MF CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o.d -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 30%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ForceField.dir/link.d -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2026.03.4 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/FiniteDifference.cpp.o CMakeFiles/ForceField.dir/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/AngleConstraints.cpp.o CMakeFiles/ForceField.dir/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/DistanceConstraints.cpp.o CMakeFiles/ForceField.dir/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/Inversions.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/UFF/Utils.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o  ../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2026.03.4 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 30%] Built target ForceField
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake "--color=" rdMolInterchange
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 30%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -MF CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o.d -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake "--color=" testSLNParse
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o -MF CMakeFiles/testSLNParse.dir/test.cpp.o.d -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SLNParse/test.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/DependInfo.cmake "--color=" Abbreviations
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/x86_64-linux-gnu-g++ -DAbbreviations_EXPORTS -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_ABBREVIATIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o -MF CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o.d -o CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/Abbreviations.cpp
[ 31%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/x86_64-linux-gnu-g++ -DAbbreviations_EXPORTS -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_ABBREVIATIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o -MF CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o.d -o CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/AbbreviationsUtils.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FilterCatalog.dir/link.d -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
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[ 31%] Built target FilterCatalog
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake "--color=" MolAlign
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -MF CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o.d -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/AlignMolecules.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake "--color=" Fingerprints
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Fingerprints.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FragCatalog.dir/link.d -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2026.03.4 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2026.03.4 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target FragCatalog
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -MF CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o.d -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/AtomPairs.cpp
[ 31%] Linking CXX shared module ../../../../rdkit/Chem/rdCIPLabeler.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCIPLabeler.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdCIPLabeler.dir/link.d  -o ../../../../rdkit/Chem/rdCIPLabeler.so CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o  ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target rdCIPLabeler
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o -MF CMakeFiles/Fingerprints.dir/MACCS.cpp.o.d -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MACCS.cpp
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake "--color=" ForceFieldHelpers
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MHFP.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MHFP.cpp.o -MF CMakeFiles/Fingerprints.dir/MHFP.cpp.o.d -o CMakeFiles/Fingerprints.dir/MHFP.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MHFP.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ReducedGraphs.dir/link.d -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2026.03.4 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2026.03.4 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target ReducedGraphs
[ 31%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
[ 31%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolInterchange.dir/link.d  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o  ../../../../lib/libRDKitMolInterchange.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake "--color=" graphmolqueryTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -MF CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o.d -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/querytest.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolChemicalFeatures.dir/link.d -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2026.03.4 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2026.03.4 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target MolChemicalFeatures
[ 31%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
[ 31%] Linking CXX executable smaTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/smaTest1.dir/link.d CMakeFiles/smaTest1.dir/smatest.cpp.o -o smaTest1  ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target smaTest1
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitAbbreviations.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Abbreviations.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Abbreviations.dir/link.d -Wl,-soname,libRDKitAbbreviations.so.1 -o ../../../lib/libRDKitAbbreviations.so.1.2026.03.4 CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAbbreviations.so.1.2026.03.4 ../../../lib/libRDKitAbbreviations.so.1 ../../../lib/libRDKitAbbreviations.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 31%] Built target Abbreviations
[ 32%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -MF CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o.d -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
[ 32%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake "--color=" rdMolChemicalFeatures
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
[ 33%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -MF CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o.d -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
[ 34%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
[ 34%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
[ 34%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
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[ 34%] Built target MolAlign
[ 34%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
[ 34%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
[ 34%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -MF CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o.d -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
[ 34%] Linking CXX shared library ../../../lib/libRDKitGaussianShape.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/cmake -E cmake_link_script CMakeFiles/GaussianShape.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/GaussianShape.dir/link.d -Wl,-soname,libRDKitGaussianShape.so.1 -o ../../../lib/libRDKitGaussianShape.so.1.2026.03.4 CMakeFiles/GaussianShape.dir/GaussianShape.cpp.o CMakeFiles/GaussianShape.dir/ShapeInput.cpp.o CMakeFiles/GaussianShape.dir/SingleConformerAlignment.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitSimDivPickers.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl ../../../lib/libRDKithc.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitGaussianShape.so.1.2026.03.4 ../../../lib/libRDKitGaussianShape.so.1 ../../../lib/libRDKitGaussianShape.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 34%] Built target GaussianShape
[ 34%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake "--color=" testReducedGraphs
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 34%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o -MF CMakeFiles/testReducedGraphs.dir/test1.cpp.o.d -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs/test1.cpp
[ 34%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake "--color=" rdReducedGraphs
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[ 34%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -MF CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o.d -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/DependInfo.cmake "--color=" rdAbbreviations
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 34%] Building CXX object Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAbbreviations_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o -MF CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o.d -o CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/Wrap/rdAbbreviations.cpp
[ 34%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleContribs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleContribs.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleContribs.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleContribs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleContribs.cpp
[ 34%] Linking CXX executable testSLNParse
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSLNParse.dir/link.d CMakeFiles/testSLNParse.dir/test.cpp.o -o testSLNParse  ../../../lib/libRDKitSLNParse.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 34%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/PlanarityContribs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/PlanarityContribs.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/PlanarityContribs.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/PlanarityContribs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/PlanarityContribs.cpp
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[ 34%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o -MF CMakeFiles/Depictor.dir/RDDepictor.cpp.o.d -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/RDDepictor.cpp
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[ 34%] Building CXX object External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/CoordGen/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCoordGen_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -MF CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o.d -o CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/CoordGen/Wrap/rdCoordGen.cpp
[ 34%] Linking CXX executable graphmolqueryTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
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/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolqueryTest.dir/link.d CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -o graphmolqueryTest  ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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make  -f Code/GraphMol/GaussianShape/Wrap/CMakeFiles/rdGaussianShape.dir/build.make Code/GraphMol/GaussianShape/Wrap/CMakeFiles/rdGaussianShape.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/Wrap/CMakeFiles/rdGaussianShape.dir/DependInfo.cmake "--color=" rdGaussianShape
[ 34%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -MF CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o.d -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/EmbeddedFrag.cpp
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[ 34%] Building CXX object Code/GraphMol/GaussianShape/Wrap/CMakeFiles/rdGaussianShape.dir/rdGaussianShape.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGaussianShape_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GaussianShape/Wrap/CMakeFiles/rdGaussianShape.dir/rdGaussianShape.cpp.o -MF CMakeFiles/rdGaussianShape.dir/rdGaussianShape.cpp.o.d -o CMakeFiles/rdGaussianShape.dir/rdGaussianShape.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/Wrap/rdGaussianShape.cpp
[ 34%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
[ 35%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o -MF CMakeFiles/Depictor.dir/DepictUtils.cpp.o.d -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/DepictUtils.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolChemicalFeatures.dir/link.d  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o  ../../../../lib/libRDKitMolChemicalFeatures.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 35%] Built target rdMolChemicalFeatures
[ 35%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/Templates.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/Templates.cpp.o -MF CMakeFiles/Depictor.dir/Templates.cpp.o.d -o CMakeFiles/Depictor.dir/Templates.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/Templates.cpp
[ 35%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ForceFieldHelpers.dir/link.d -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleContribs.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/PlanarityContribs.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
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[ 35%] Building CXX object Code/ForceField/CMakeFiles/ForceFieldsCatch.dir/catch_tests.cpp.o
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[ 35%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
[ 35%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
[ 35%] Building CXX object Code/GraphMol/MolInteractionFields/CMakeFiles/MolInteractionFields.dir/MIFDescriptors.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -MF CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o.d -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/TriangleSmooth.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolInteractionFields_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERACTIONFIELDS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolInteractionFields/CMakeFiles/MolInteractionFields.dir/MIFDescriptors.cpp.o -MF CMakeFiles/MolInteractionFields.dir/MIFDescriptors.cpp.o.d -o CMakeFiles/MolInteractionFields.dir/MIFDescriptors.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.cpp
[ 35%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o -MF CMakeFiles/rdForceField.dir/ForceField.cpp.o.d -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/Wrap/ForceField.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -MF CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o.d -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
[ 35%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -MF CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o.d -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/DistGeomUtils.cpp
[ 35%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdReducedGraphs.dir/link.d  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o  ../../../../lib/libRDKitReducedGraphs.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 35%] Built target rdReducedGraphs
[ 35%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContribs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContribs.cpp.o -MF CMakeFiles/DistGeometry.dir/DistViolationContribs.cpp.o.d -o CMakeFiles/DistGeometry.dir/DistViolationContribs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/DistViolationContribs.cpp
[ 35%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Fingerprints.dir/link.d -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2026.03.4 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/MHFP.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o  ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
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[ 35%] Built target Fingerprints
[ 35%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContribs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContribs.cpp.o -MF CMakeFiles/DistGeometry.dir/ChiralViolationContribs.cpp.o.d -o CMakeFiles/DistGeometry.dir/ChiralViolationContribs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/ChiralViolationContribs.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake "--color=" rdFingerprintGenerator
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 36%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -MF CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o.d -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/DependInfo.cmake "--color=" rdMHFPFingerprint
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 36%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMHFPFingerprint_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o -MF CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o.d -o CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp
[ 36%] Linking CXX shared module ../../../rdkit/Chem/rdCoordGen.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/CoordGen/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCoordGen.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdCoordGen.dir/link.d  -o ../../../rdkit/Chem/rdCoordGen.so CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o  /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 36%] Built target rdCoordGen
[ 36%] Linking CXX shared module ../../../../rdkit/Chem/rdAbbreviations.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAbbreviations.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdAbbreviations.dir/link.d  -o ../../../../rdkit/Chem/rdAbbreviations.so CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o  ../../../../lib/libRDKitAbbreviations.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 36%] Built target rdAbbreviations
[ 36%] Linking CXX executable ForceFieldsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ForceFieldsCatch.dir/link.d CMakeFiles/ForceFieldsCatch.dir/catch_tests.cpp.o -o ForceFieldsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitForceField.so.1.2026.03.4 ../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 36%] Built target ForceFieldsCatch
[ 36%] Linking CXX shared library ../../../lib/libRDKitMolInteractionFields.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInteractionFields.dir/link.txt --verbose=1
[ 37%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolInteractionFields.dir/link.d -Wl,-soname,libRDKitMolInteractionFields.so.1 -o ../../../lib/libRDKitMolInteractionFields.so.1.2026.03.4 CMakeFiles/MolInteractionFields.dir/MIFDescriptors.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInteractionFields.so.1.2026.03.4 ../../../lib/libRDKitMolInteractionFields.so.1 ../../../lib/libRDKitMolInteractionFields.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 37%] Built target MolInteractionFields
make  -f Code/GraphMol/MolInteractionFields/Wrap/CMakeFiles/rdMIF.dir/build.make Code/GraphMol/MolInteractionFields/Wrap/CMakeFiles/rdMIF.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields/Wrap/CMakeFiles/rdMIF.dir/DependInfo.cmake "--color=" rdMIF
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 38%] Building CXX object Code/GraphMol/MolInteractionFields/Wrap/CMakeFiles/rdMIF.dir/rdMIF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMIF_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolInteractionFields/Wrap/CMakeFiles/rdMIF.dir/rdMIF.cpp.o -MF CMakeFiles/rdMIF.dir/rdMIF.cpp.o.d -o CMakeFiles/rdMIF.dir/rdMIF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/Wrap/rdMIF.cpp
[ 38%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DistGeometry.dir/link.d -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2026.03.4 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContribs.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContribs.cpp.o  ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../lib/libRDKitForceField.so.1.2026.03.4 ../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 38%] Built target DistGeometry
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake "--color=" testDistGeom
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake "--color=" DistGeomHelpers
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake "--color=" DistGeom
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -MF CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o.d -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/testDistGeom.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o -MF CMakeFiles/DistGeom.dir/DistGeom.cpp.o.d -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/Wrap/DistGeom.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -MF CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o.d -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o -MF CMakeFiles/MolHash.dir/hashfunctions.cpp.o.d -o CMakeFiles/MolHash.dir/hashfunctions.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/hashfunctions.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDInchiLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDINCHILIB_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT External/INCHI-API/CMakeFiles/RDInchiLib.dir/inchi.cpp.o -MF CMakeFiles/RDInchiLib.dir/inchi.cpp.o.d -o CMakeFiles/RDInchiLib.dir/inchi.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/INCHI-API/inchi.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -MF CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o.d -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdForceFieldHelpers.dir/link.d  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o  ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 38%] Built target rdForceFieldHelpers
[ 38%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o -MF CMakeFiles/MolHash.dir/normalize.cpp.o.d -o CMakeFiles/MolHash.dir/normalize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/normalize.cpp
In file included from /usr/include/c++/15/string:56,
                 from /usr/include/boost/core/demangle.hpp:14,
                 from /usr/include/boost/core/typeinfo.hpp:135,
                 from /usr/include/boost/function/function_base.hpp:16,
                 from /usr/include/boost/function/function_template.hpp:14,
                 from /usr/include/boost/function/function0.hpp:10,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp:11:
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘ValueT boost::python::stl_input_iterator<ValueT>::dereference() const [with ValueT = std::__cxx11::basic_string<char>]’ at /usr/include/boost/python/stl_iterator.hpp:48:61,
    inlined from ‘static typename Facade::reference boost::iterators::iterator_core_access::dereference(const Facade&) [with Facade = boost::python::stl_input_iterator<std::__cxx11::basic_string<char> >]’ at /usr/include/boost/iterator/iterator_facade.hpp:500:30,
    inlined from ‘boost::iterators::detail::iterator_facade_base<Derived, Value, CategoryOrTraversal, Reference, Difference, false, false>::reference boost::iterators::detail::iterator_facade_base<Derived, Value, CategoryOrTraversal, Reference, Difference, false, false>::operator*() const [with Derived = boost::python::stl_input_iterator<std::__cxx11::basic_string<char> >; Value = std::__cxx11::basic_string<char>; CategoryOrTraversal = std::input_iterator_tag; Reference = std::__cxx11::basic_string<char>; Difference = long int]’ at /usr/include/boost/iterator/iterator_facade.hpp:598:65,
    inlined from ‘constexpr void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::python::stl_input_iterator<std::__cxx11::basic_string<char> >; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’ at /usr/include/c++/15/bits/stl_vector.h:1957:21,
    inlined from ‘constexpr std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::python::stl_input_iterator<std::__cxx11::basic_string<char> >; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’ at /usr/include/c++/15/bits/stl_vector.h:751:23,
    inlined from ‘std::vector<T> RDKit::MHFPWrapper::ListToVector(const boost::python::api::object&) [with T = std::__cxx11::basic_string<char>]’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp:28:56:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
In file included from /usr/include/boost/python.hpp:66:
/usr/include/boost/python/stl_iterator.hpp: In function ‘std::vector<T> RDKit::MHFPWrapper::ListToVector(const boost::python::api::object&) [with T = std::__cxx11::basic_string<char>]’:
/usr/include/boost/python/stl_iterator.hpp:48:16: note: ‘<anonymous>’ declared here
   48 |         return extract<ValueT>(this->impl_.current().get())();
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdForceField.dir/link.d  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 38%] Built target rdForceField
[ 38%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -MF CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o.d -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
[ 38%] Linking CXX executable testDistGeom
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdGaussianShape.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGaussianShape.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testDistGeom.dir/link.d CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -o testDistGeom  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitDistGeometry.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../lib/libRDKitForceField.so.1.2026.03.4 ../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 38%] Built target testDistGeom
[ 39%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenterJSONParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenterJSONParser.cpp.o -MF CMakeFiles/ChemTransforms.dir/MolFragmenterJSONParser.cpp.o.d -o CMakeFiles/ChemTransforms.dir/MolFragmenterJSONParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/MolFragmenterJSONParser.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdGaussianShape.dir/link.d  -o ../../../../rdkit/Chem/rdGaussianShape.so CMakeFiles/rdGaussianShape.dir/rdGaussianShape.cpp.o  ../../../../lib/libRDKitGaussianShape.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSimDivPickers.so.1.2026.03.4 ../../../../lib/libRDKithc.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Built target rdGaussianShape
[ 39%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolZip.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolZip.cpp.o -MF CMakeFiles/ChemTransforms.dir/MolZip.cpp.o.d -o CMakeFiles/ChemTransforms.dir/MolZip.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/MolZip.cpp
[ 39%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/DistGeom.dir/link.d  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Built target DistGeom
[ 39%] Linking CXX shared module ../../../../rdkit/Chem/rdMHFPFingerprint.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMHFPFingerprint.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMHFPFingerprint.dir/link.d  -o ../../../../rdkit/Chem/rdMHFPFingerprint.so CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Built target rdMHFPFingerprint
[ 39%] Linking CXX shared library ../../lib/libRDKitRDInchiLib.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDInchiLib.dir/link.txt --verbose=1
[ 39%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RDInchiLib.dir/link.d -Wl,-soname,libRDKitRDInchiLib.so.1 -o ../../lib/libRDKitRDInchiLib.so.1.2026.03.4 CMakeFiles/RDInchiLib.dir/inchi.cpp.o  /usr/lib/x86_64-linux-gnu/libinchi.so ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDInchiLib.so.1.2026.03.4 ../../lib/libRDKitRDInchiLib.so.1 ../../lib/libRDKitRDInchiLib.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Built target RDInchiLib
make  -f External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/build.make External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/INCHI-API/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/DependInfo.cmake "--color=" rdinchi
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/build.make External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Building CXX object External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/pyInchi.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdinchi_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/pyInchi.cpp.o -MF CMakeFiles/rdinchi.dir/pyInchi.cpp.o.d -o CMakeFiles/rdinchi.dir/pyInchi.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/INCHI-API/Wrap/pyInchi.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolHash.dir/link.d -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2026.03.4 CMakeFiles/MolHash.dir/hashfunctions.cpp.o CMakeFiles/MolHash.dir/normalize.cpp.o  ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2026.03.4 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 39%] Built target MolHash
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake "--color=" rdMolHash
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -MF CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o.d -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdfiltercatalog.dir/link.d  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o  ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target rdfiltercatalog
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdDepictor.dir/link.d  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o  ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target rdDepictor
[ 40%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DistGeomHelpers.dir/link.d -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target DistGeomHelpers
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdMIF.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMIF.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdFingerprintGenerator.dir/link.d  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target rdFingerprintGenerator
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMIF.dir/link.d  -o ../../../../rdkit/Chem/rdMIF.so CMakeFiles/rdMIF.dir/rdMIF.cpp.o  ../../../../lib/libRDKitMolInteractionFields.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target rdMIF
[ 40%] Linking CXX shared module ../../../rdkit/Chem/rdinchi.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/INCHI-API/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdinchi.dir/link.txt --verbose=1
[ 40%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdinchi.dir/link.d  -o ../../../rdkit/Chem/rdinchi.so CMakeFiles/rdinchi.dir/pyInchi.cpp.o  ../../../lib/libRDKitRDInchiLib.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libinchi.so ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target rdinchi
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ChemTransforms.dir/link.d -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenterJSONParser.cpp.o CMakeFiles/ChemTransforms.dir/MolZip.cpp.o  ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 40%] Built target ChemTransforms
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake "--color=" FileParsers
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -MF CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/Mol2FileParser.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o -MF CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o.d -o CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CDXMLParser.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolFileParser.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SCSRMolFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/SCSRMolFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/SCSRMolFileParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SCSRMolFileParser.cpp
[ 40%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -MF CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o.d -o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSGroupParsing.cpp
[ 40%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -MF CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o.d -o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSGroupWriting.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolFileStereochem.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SDMolSupplier.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o -MF CMakeFiles/FileParsers.dir/SDWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SDWriter.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -MF CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SmilesWriter.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -MF CMakeFiles/FileParsers.dir/TDTWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/TDTWriter.cpp
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolFileWriter.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
[ 41%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolHash.dir/link.d  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o  ../../../../lib/libRDKitMolHash.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 41%] Built target rdMolHash
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/TplFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/TplFileWriter.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o -MF CMakeFiles/FileParsers.dir/PDBParser.cpp.o.d -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/PDBParser.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -MF CMakeFiles/FileParsers.dir/PDBWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/PDBWriter.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CMLWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CMLWriter.cpp.o -MF CMakeFiles/FileParsers.dir/CMLWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/CMLWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CMLWriter.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/XYZFileWriter.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/XYZFileParser.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeWriter.cpp.o -MF CMakeFiles/FileParsers.dir/MaeWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/MaeWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MaeWriter.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -MF CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o.d -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/ProximityBonds.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -MF CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o.d -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SequenceParsers.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -MF CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o.d -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SequenceWriters.cpp
[ 42%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o -MF CMakeFiles/FileParsers.dir/SVGParser.cpp.o.d -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SVGParser.cpp
[ 43%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PNGParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PNGParser.cpp.o -MF CMakeFiles/FileParsers.dir/PNGParser.cpp.o.d -o CMakeFiles/FileParsers.dir/PNGParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/PNGParser.cpp
[ 43%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MultithreadedMolSupplier.cpp
[ 43%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.cpp
[ 43%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.cpp
[ 43%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FileParsers.dir/link.d -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2026.03.4 CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/SCSRMolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/CMLWriter.cpp.o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MaeWriter.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o CMakeFiles/FileParsers.dir/PNGParser.cpp.o CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 43%] Built target FileParsers
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/UFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake "--color=" testUFFForceField
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake "--color=" graphmoltestChirality
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake "--color=" molBundleTest
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o -MF CMakeFiles/Descriptors.dir/Crippen.cpp.o.d -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Crippen.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -MF CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o.d -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/testPickler.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -MF CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o.d -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/test-valgrind.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -MF CMakeFiles/hanoiTest.dir/hanoitest.cpp.o.d -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/hanoitest.cpp
[ 44%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o
[ 44%] Building CXX object Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -MF CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o.d -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/resMolSupplierTest.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -MF CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o.d -o CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_graphmol.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o -MF CMakeFiles/testSGroup.dir/testSGroup.cpp.o.d -o CMakeFiles/testSGroup.dir/testSGroup.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/testSGroup.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -MF CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o.d -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/testChirality.cpp
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[ 44%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/MolDescriptors.cpp
[ 44%] Linking CXX executable graphmolOrganometallicsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolOrganometallicsCatch.dir/link.txt --verbose=1
[ 44%] Linking CXX executable molBundleTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolOrganometallicsCatch.dir/link.d CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o -o graphmolOrganometallicsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 44%] Built target graphmolOrganometallicsCatch
[ 44%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o -MF CMakeFiles/Descriptors.dir/MolSurf.cpp.o.d -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/MolSurf.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molBundleTest.dir/link.d CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -o molBundleTest  ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
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[ 44%] Built target molBundleTest
[ 44%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o -MF CMakeFiles/Descriptors.dir/Lipinski.cpp.o.d -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Lipinski.cpp
[ 44%] Linking CXX executable resMolSupplierTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
[ 45%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/resMolSupplierTest.dir/link.d CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -o resMolSupplierTest  ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
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[ 46%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.d CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -o graphmoltestPicklerGlobalSetting  ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Built target graphmoltestPicklerGlobalSetting
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake "--color=" graphmolSGroupCatch
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[ 46%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -MF CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o.d -o CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_sgroups.cpp
[ 46%] Linking CXX executable testUFFForceField
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testUFFForceField.dir/link.d CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -o testUFFForceField  ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Built target testUFFForceField
[ 46%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o -MF CMakeFiles/Descriptors.dir/MQN.cpp.o.d -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/MQN.cpp
[ 46%] Linking CXX executable testCoordGen
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/External/CoordGen && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoordGen.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testCoordGen.dir/link.d CMakeFiles/testCoordGen.dir/test.cpp.o -o testCoordGen  /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/DependInfo.cmake "--color=" graphmolAdjustQueryCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -MF CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o.d -o CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_adjustquery.cpp
make  -f Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/DependInfo.cmake "--color=" chiralityTestsCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -MF CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o.d -o CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_chirality.cpp
[ 46%] Linking CXX executable hanoiTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/hanoiTest.dir/link.d CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -o hanoiTest  ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Built target hanoiTest
[ 46%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o -MF CMakeFiles/Descriptors.dir/Property.cpp.o.d -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Property.cpp
make  -f Code/GraphMol/CMakeFiles/canonTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/canonTestsCatch.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/canonTestsCatch.dir/DependInfo.cmake "--color=" canonTestsCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -MF CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o.d -o CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_canon.cpp
make  -f Code/GraphMol/CMakeFiles/pickleTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/pickleTestsCatch.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/pickleTestsCatch.dir/DependInfo.cmake "--color=" pickleTestsCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/CMakeFiles/pickleTestsCatch.dir/catch_pickles.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/pickleTestsCatch.dir/catch_pickles.cpp.o -MF CMakeFiles/pickleTestsCatch.dir/catch_pickles.cpp.o.d -o CMakeFiles/pickleTestsCatch.dir/catch_pickles.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_pickles.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CMakeFiles/molopsTestsCatch.dir/DependInfo.cmake "--color=" molopsTestsCatch
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[ 46%] Building CXX object Code/GraphMol/CMakeFiles/molopsTestsCatch.dir/catch_molops.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CMakeFiles/molopsTestsCatch.dir/catch_molops.cpp.o -MF CMakeFiles/molopsTestsCatch.dir/catch_molops.cpp.o.d -o CMakeFiles/molopsTestsCatch.dir/catch_molops.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/catch_molops.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/smitest1.cpp.o -MF CMakeFiles/smiTest1.dir/smitest1.cpp.o.d -o CMakeFiles/smiTest1.dir/smitest1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/smitest1.cpp
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[ 46%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
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[ 46%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -MF CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o.d -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 46%] Linking CXX executable graphmolSGroupCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolSGroupCatch.dir/link.txt --verbose=1
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake "--color=" ChemReactions
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[ 46%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o -MF CMakeFiles/ChemReactions.dir/Reaction.cpp.o.d -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Reaction.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolSGroupCatch.dir/link.d CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -o graphmolSGroupCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Built target graphmolSGroupCatch
[ 46%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -MF CMakeFiles/ChemReactions.dir/MDLParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/MDLParser.cpp
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake "--color=" smiTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/catch_tests.cpp
[ 46%] Linking CXX executable graphmoltestPickler
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmoltestPickler.dir/link.d CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -o graphmoltestPickler  ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Built target graphmoltestPickler
[ 46%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -MF CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/DaylightParser.cpp
make  -f Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/DependInfo.cmake "--color=" nontetrahedralCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 46%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -MF CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o.d -o CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/nontetrahedral_tests.cpp
[ 46%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionPickler.cpp
[ 47%] Linking CXX executable pickleTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/pickleTestsCatch.dir/link.txt --verbose=1
[ 47%] Linking CXX executable graphmolAdjustQueryCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolAdjustQueryCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/pickleTestsCatch.dir/link.d CMakeFiles/pickleTestsCatch.dir/catch_pickles.cpp.o -o pickleTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Built target pickleTestsCatch
[ 47%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AtomFeat.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AtomFeat.cpp.o -MF CMakeFiles/Descriptors.dir/AtomFeat.cpp.o.d -o CMakeFiles/Descriptors.dir/AtomFeat.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/AtomFeat.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolAdjustQueryCatch.dir/link.d CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -o graphmolAdjustQueryCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Built target graphmolAdjustQueryCatch
[ 47%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionWriter.cpp
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smartsTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smartsTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse/CMakeFiles/smartsTestCatch.dir/DependInfo.cmake "--color=" smartsTestCatch
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smartsTestCatch.dir/smarts_catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smartsTestCatch.dir/smarts_catch_tests.cpp.o -MF CMakeFiles/smartsTestCatch.dir/smarts_catch_tests.cpp.o.d -o CMakeFiles/smartsTestCatch.dir/smarts_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/smarts_catch_tests.cpp
[ 47%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o -MF CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o.d -o CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/OxidationNumbers.cpp
make  -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake "--color=" testDepictor
[ 47%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionDepict.cpp
[ 47%] Linking CXX executable canonTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/canonTestsCatch.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o -MF CMakeFiles/testDepictor.dir/testDepictor.cpp.o.d -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/testDepictor.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/canonTestsCatch.dir/link.d CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -o canonTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Built target canonTestsCatch
make  -f Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/build.make Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/DependInfo.cmake "--color=" depictorCatch
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make  -f Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/build.make Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/catch_tests.cpp.o -MF CMakeFiles/depictorCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/depictorCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/catch_tests.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake "--color=" fileParsersTest1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 47%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o -MF CMakeFiles/fileParsersTest1.dir/test1.cpp.o.d -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/test1.cpp
[ 48%] Linking CXX executable molopsTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molopsTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molopsTestsCatch.dir/link.d CMakeFiles/molopsTestsCatch.dir/catch_molops.cpp.o -o molopsTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 48%] Built target molopsTestsCatch
[ 48%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
[ 48%] Linking CXX executable nontetrahedralCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/nontetrahedralCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/nontetrahedralCatch.dir/link.d CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -o nontetrahedralCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 48%] Built target nontetrahedralCatch
[ 48%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DCLV.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DCLV.cpp.o -MF CMakeFiles/Descriptors.dir/DCLV.cpp.o.d -o CMakeFiles/Descriptors.dir/DCLV.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/DCLV.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testAtropisomers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testAtropisomers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testAtropisomers.dir/DependInfo.cmake "--color=" testAtropisomers
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 48%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testAtropisomers.dir/testAtropisomers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testAtropisomers.dir/testAtropisomers.cpp.o -MF CMakeFiles/testAtropisomers.dir/testAtropisomers.cpp.o.d -o CMakeFiles/testAtropisomers.dir/testAtropisomers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testAtropisomers.cpp
[ 48%] Linking CXX executable graphmoltestChirality
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
[ 48%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/EEM.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/EEM.cpp.o -MF CMakeFiles/Descriptors.dir/EEM.cpp.o.d -o CMakeFiles/Descriptors.dir/EEM.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/EEM.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmoltestChirality.dir/link.d CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -o graphmoltestChirality  ../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 48%] Built target graphmoltestChirality
[ 48%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionUtils.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/DependInfo.cmake "--color=" testSquiggleDoubleBonds
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/testSquiggleDoubleBonds.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testSquiggleDoubleBonds.dir/testSquiggleDoubleBonds.cpp.o -MF CMakeFiles/testSquiggleDoubleBonds.dir/testSquiggleDoubleBonds.cpp.o.d -o CMakeFiles/testSquiggleDoubleBonds.dir/testSquiggleDoubleBonds.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testSquiggleDoubleBonds.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake "--color=" testMolSupplier
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -MF CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o.d -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testMolSupplier.cpp
[ 49%] Linking CXX executable smartsTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smartsTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/smartsTestCatch.dir/link.d CMakeFiles/smartsTestCatch.dir/smarts_catch_tests.cpp.o -o smartsTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 49%] Built target smartsTestCatch
[ 49%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -MF CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/MoleculeParser.cpp
[ 50%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PBF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PBF.cpp.o -MF CMakeFiles/Descriptors.dir/PBF.cpp.o.d -o CMakeFiles/Descriptors.dir/PBF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/PBF.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/DependInfo.cmake "--color=" testGeneralFileReader
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 50%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -MF CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o.d -o CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testGeneralFileReader.cpp
[ 51%] Linking CXX executable graphmolTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
[ 51%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PMI.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PMI.cpp.o -MF CMakeFiles/Descriptors.dir/PMI.cpp.o.d -o CMakeFiles/Descriptors.dir/PMI.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/PMI.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolTestsCatch.dir/link.d CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -o graphmolTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 51%] Built target graphmolTestsCatch
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionRunner.cpp
[ 52%] Linking CXX executable testSquiggleDoubleBonds
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSquiggleDoubleBonds.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSquiggleDoubleBonds.dir/link.d CMakeFiles/testSquiggleDoubleBonds.dir/testSquiggleDoubleBonds.cpp.o -o testSquiggleDoubleBonds  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target testSquiggleDoubleBonds
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o -MF CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o.d -o CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/AUTOCORR3D.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/DependInfo.cmake "--color=" testMultithreadedMolSupplier
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -MF CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o.d -o CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testMultithreadedMolSupplier.cpp
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -MF CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o.d -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/RDF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/RDF.cpp.o -MF CMakeFiles/Descriptors.dir/RDF.cpp.o.d -o CMakeFiles/Descriptors.dir/RDF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/RDF.cpp
[ 52%] Linking CXX executable testAtropisomers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAtropisomers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAtropisomers.dir/link.d CMakeFiles/testAtropisomers.dir/testAtropisomers.cpp.o -o testAtropisomers  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target testAtropisomers
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -MF CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o.d -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
[ 52%] Linking CXX executable testDepictor
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testDepictor.dir/link.d CMakeFiles/testDepictor.dir/testDepictor.cpp.o -o testDepictor  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target testDepictor
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MORSE.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MORSE.cpp.o -MF CMakeFiles/Descriptors.dir/MORSE.cpp.o.d -o CMakeFiles/Descriptors.dir/MORSE.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/MORSE.cpp
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PNGParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PNGParser.cpp.o -MF CMakeFiles/ChemReactions.dir/PNGParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/PNGParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/PNGParser.cpp
[ 52%] Linking CXX executable testGeneralFileReader
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGeneralFileReader.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testGeneralFileReader.dir/link.d CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -o testGeneralFileReader  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitRDStreams.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target testGeneralFileReader
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o -MF CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/CDXMLParser.cpp
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC  -fpermissive  -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake "--color=" testMolWriter
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -MF CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o.d -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testMolWriter.cpp
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/GETAWAY.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/GETAWAY.cpp.o -MF CMakeFiles/Descriptors.dir/GETAWAY.cpp.o.d -o CMakeFiles/Descriptors.dir/GETAWAY.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/GETAWAY.cpp
[ 52%] Linking CXX executable testMultithreadedMolSupplier
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultithreadedMolSupplier.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMultithreadedMolSupplier.dir/link.d CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -o testMultithreadedMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitRDStreams.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target testMultithreadedMolSupplier
[ 52%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake "--color=" testTplParser
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o -MF CMakeFiles/testTplParser.dir/testTpls.cpp.o.d -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testTpls.cpp
[ 52%] Linking CXX executable smiTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/smiTest1.dir/link.d CMakeFiles/smiTest1.dir/smitest1.cpp.o -o smiTest1  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target smiTest1
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/WHIM.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/WHIM.cpp.o -MF CMakeFiles/Descriptors.dir/WHIM.cpp.o.d -o CMakeFiles/Descriptors.dir/WHIM.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/WHIM.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake "--color=" testMol2ToMol
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -MF CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o.d -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testMol2ToMol.cpp
[ 52%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/CoulombMat.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/CoulombMat.cpp.o -MF CMakeFiles/Descriptors.dir/CoulombMat.cpp.o.d -o CMakeFiles/Descriptors.dir/CoulombMat.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/CoulombMat.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake "--color=" testSequence
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o -MF CMakeFiles/testSequence.dir/testSequence.cpp.o.d -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testSequence.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake "--color=" testExtendedStereoParsing
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -MF CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o.d -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 52%] Linking CXX executable chiralityTestsCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/chiralityTestsCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/chiralityTestsCatch.dir/link.d CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -o chiralityTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 52%] Built target chiralityTestsCatch
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake "--color=" fileParsersCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -MF CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o.d -o CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/file_parsers_catch.cpp
[ 53%] Linking CXX executable depictorCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/depictorCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/depictorCatch.dir/link.d CMakeFiles/depictorCatch.dir/catch_tests.cpp.o -o depictorCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Built target depictorCatch
make  -f Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/DependInfo.cmake "--color=" macromolsCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/macromols_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/macromolsCatchTest.dir/macromols_catch.cpp.o -MF CMakeFiles/macromolsCatchTest.dir/macromols_catch.cpp.o.d -o CMakeFiles/macromolsCatchTest.dir/macromols_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/macromols_catch.cpp
[ 53%] Linking CXX executable smiTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/smiTestCatch.dir/link.d CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -o smiTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Built target smiTestCatch
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake "--color=" testPropertyLists
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -MF CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o.d -o CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/testPropertyLists.cpp
[ 53%] Linking CXX executable testSequence
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSequence.dir/link.d CMakeFiles/testSequence.dir/testSequence.cpp.o -o testSequence  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Built target testSequence
make  -f Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/DependInfo.cmake "--color=" XYZFileParserCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -MF CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o.d -o CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/XYZFileParserCatchTest.cpp
make  -f Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/DependInfo.cmake "--color=" cdxmlParserCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -MF CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o.d -o CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/cdxml_parser_catch.cpp
[ 53%] Linking CXX executable testMolSupplier
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolSupplier.dir/link.d CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -o testMolSupplier  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitRDStreams.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/DependInfo.cmake "--color=" molfileStereoCatchTest
[ 53%] Built target testMolSupplier
make  -f Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/DependInfo.cmake "--color=" connectTheDotsTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/connectTheDots_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -MF CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o.d -o CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/molfile_stereo_catch.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/connectTheDotsTest.dir/connectTheDots_catch.cpp.o -MF CMakeFiles/connectTheDotsTest.dir/connectTheDots_catch.cpp.o.d -o CMakeFiles/connectTheDotsTest.dir/connectTheDots_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/connectTheDots_catch.cpp
[ 53%] Linking CXX executable testMol2ToMol
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMol2ToMol.dir/link.d CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -o testMol2ToMol  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Linking CXX executable testTplParser
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
[ 53%] Built target testMol2ToMol
make  -f Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/DependInfo.cmake "--color=" v2MolSuppliers
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/v2_suppliers_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/v2MolSuppliers.dir/v2_suppliers_catch.cpp.o -MF CMakeFiles/v2MolSuppliers.dir/v2_suppliers_catch.cpp.o.d -o CMakeFiles/v2MolSuppliers.dir/v2_suppliers_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/v2_suppliers_catch.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testTplParser.dir/link.d CMakeFiles/testTplParser.dir/testTpls.cpp.o -o testTplParser  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Built target testTplParser
make  -f Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/DependInfo.cmake "--color=" v2FileParsersCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/v2_file_parsers_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/v2FileParsersCatchTest.dir/v2_file_parsers_catch.cpp.o -MF CMakeFiles/v2FileParsersCatchTest.dir/v2_file_parsers_catch.cpp.o.d -o CMakeFiles/v2FileParsersCatchTest.dir/v2_file_parsers_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/v2_file_parsers_catch.cpp
[ 53%] Linking CXX executable testExtendedStereoParsing
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testExtendedStereoParsing.dir/link.d CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -o testExtendedStereoParsing  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 53%] Built target testExtendedStereoParsing
make  -f Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/DependInfo.cmake "--color=" atropisomersCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/atropisomers_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/atropisomersCatch.dir/atropisomers_catch.cpp.o -MF CMakeFiles/atropisomersCatch.dir/atropisomers_catch.cpp.o.d -o CMakeFiles/atropisomersCatch.dir/atropisomers_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/atropisomers_catch.cpp
[ 54%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ChemReactions.dir/link.d -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2026.03.4 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/PNGParser.cpp.o CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o  ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target ChemReactions
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/DependInfo.cmake "--color=" fileParsersIteratorsTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/fileParsersIterTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/fileParsersIteratorsTest.dir/fileParsersIterTest.cpp.o -MF CMakeFiles/fileParsersIteratorsTest.dir/fileParsersIterTest.cpp.o.d -o CMakeFiles/fileParsersIteratorsTest.dir/fileParsersIterTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/fileParsersIterTest.cpp
[ 54%] Linking CXX executable connectTheDotsTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/connectTheDotsTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/connectTheDotsTest.dir/link.d CMakeFiles/connectTheDotsTest.dir/connectTheDots_catch.cpp.o -o connectTheDotsTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target connectTheDotsTest
make  -f Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/DependInfo.cmake "--color=" multithreadedSupplierCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Linking CXX executable testMolWriter
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/multithreaded_supplier_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/multithreadedSupplierCatchTest.dir/multithreaded_supplier_catch.cpp.o -MF CMakeFiles/multithreadedSupplierCatchTest.dir/multithreaded_supplier_catch.cpp.o.d -o CMakeFiles/multithreadedSupplierCatchTest.dir/multithreaded_supplier_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/multithreaded_supplier_catch.cpp
[ 54%] Linking CXX executable macromolsCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/macromolsCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolWriter.dir/link.d CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -o testMolWriter  ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target testMolWriter
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake "--color=" testSubstructMatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/testSubstructMatch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/testSubstructMatch.cpp.o -MF CMakeFiles/testSubstructMatch.dir/testSubstructMatch.cpp.o.d -o CMakeFiles/testSubstructMatch.dir/testSubstructMatch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/testSubstructMatch.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/macromolsCatchTest.dir/link.d CMakeFiles/macromolsCatchTest.dir/macromols_catch.cpp.o -o macromolsCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target macromolsCatchTest
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake "--color=" substructTestCatch
[ 54%] Linking CXX executable v2FileParsersCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/v2FileParsersCatchTest.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/catch_tests.cpp
[ 54%] Linking CXX executable atropisomersCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/atropisomersCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/v2FileParsersCatchTest.dir/link.d CMakeFiles/v2FileParsersCatchTest.dir/v2_file_parsers_catch.cpp.o -o v2FileParsersCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target v2FileParsersCatchTest
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake "--color=" testReaction
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o -MF CMakeFiles/testReaction.dir/testReaction.cpp.o.d -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/testReaction.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/atropisomersCatch.dir/link.d CMakeFiles/atropisomersCatch.dir/atropisomers_catch.cpp.o -o atropisomersCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target atropisomersCatch
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake "--color=" testReactionFingerprints
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -MF CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o.d -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 54%] Linking CXX executable XYZFileParserCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/XYZFileParserCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/XYZFileParserCatchTest.dir/link.d CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -o XYZFileParserCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target XYZFileParserCatchTest
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake "--color=" testEnumeration
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -MF CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o.d -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
[ 54%] Linking CXX executable v2MolSuppliers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/v2MolSuppliers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/v2MolSuppliers.dir/link.d CMakeFiles/v2MolSuppliers.dir/v2_suppliers_catch.cpp.o -o v2MolSuppliers  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Built target v2MolSuppliers
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake "--color=" rxnTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 54%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/catch_tests.cpp
[ 54%] Linking CXX executable molfileStereoCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/molfileStereoCatchTest.dir/link.txt --verbose=1
[ 55%] Linking CXX executable cdxmlParserCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlParserCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molfileStereoCatchTest.dir/link.d CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -o molfileStereoCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target molfileStereoCatchTest
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/cdxmlParserCatchTest.dir/link.d CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -o cdxmlParserCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake "--color=" testChemTransforms
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target cdxmlParserCatchTest
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake "--color=" chemTransformsTestCatch
[ 55%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -MF CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o.d -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/catch_tests.cpp
[ 55%] Linking CXX executable fileParsersIteratorsTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersIteratorsTest.dir/link.txt --verbose=1
[ 55%] Linking CXX executable testPropertyLists
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPropertyLists.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fileParsersIteratorsTest.dir/link.d CMakeFiles/fileParsersIteratorsTest.dir/fileParsersIterTest.cpp.o -o fileParsersIteratorsTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target fileParsersIteratorsTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake "--color=" MolStandardize
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Pipeline.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Pipeline.cpp.o -MF CMakeFiles/MolStandardize.dir/Pipeline.cpp.o.d -o CMakeFiles/MolStandardize.dir/Pipeline.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Pipeline.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testPropertyLists.dir/link.d CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -o testPropertyLists  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
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[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -MF CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o.d -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/MolStandardize.cpp
[ 55%] Linking CXX executable multithreadedSupplierCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/multithreadedSupplierCatchTest.dir/link.txt --verbose=1
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o -MF CMakeFiles/MolStandardize.dir/Metal.cpp.o.d -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Metal.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake "--color=" filterCatalogTest
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[ 55%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -MF CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o.d -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
[ 55%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
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[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o -MF CMakeFiles/MolStandardize.dir/Normalize.cpp.o.d -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Normalize.cpp
[ 55%] Linking CXX executable testReactionFingerprints
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testReactionFingerprints.dir/link.d CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -o testReactionFingerprints  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target testReactionFingerprints
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake "--color=" testFragCatalog
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o -MF CMakeFiles/testFragCatalog.dir/test1.cpp.o.d -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/test1.cpp
[ 55%] Linking CXX executable testEnumeration
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testEnumeration.dir/link.d CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -o testEnumeration  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target testEnumeration
[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o -MF CMakeFiles/MolStandardize.dir/Validate.cpp.o.d -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Validate.cpp
[ 55%] Linking CXX executable graphmolMolOpsTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/graphmolMolOpsTest.dir/link.d CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -o graphmolMolOpsTest  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target graphmolMolOpsTest
[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o -MF CMakeFiles/MolStandardize.dir/Charge.cpp.o.d -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Charge.cpp
[ 55%] Linking CXX executable fileParsersTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fileParsersTest1.dir/link.d CMakeFiles/fileParsersTest1.dir/test1.cpp.o -o fileParsersTest1  ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target fileParsersTest1
[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -MF CMakeFiles/MolStandardize.dir/Tautomer.cpp.o.d -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Tautomer.cpp
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake "--color=" rdfragcatalog
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -MF CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
[ 55%] Linking CXX executable filterCatalogTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/filterCatalogTest.dir/link.d CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -o filterCatalogTest  ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 55%] Built target filterCatalogTest
[ 55%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o -MF CMakeFiles/MolStandardize.dir/Fragment.cpp.o.d -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Fragment.cpp
[ 55%] Linking CXX executable substructTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructTestCatch.dir/link.txt --verbose=1
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake "--color=" testDescriptors
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 56%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o -MF CMakeFiles/testDescriptors.dir/test.cpp.o.d -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/test.cpp
[ 56%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
[ 56%] Linking CXX executable testSubstructMatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/substructTestCatch.dir/link.d CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -o substructTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 56%] Built target substructTestCatch
[ 56%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
[ 56%] Linking CXX executable testFragCatalog
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSubstructMatch.dir/link.d CMakeFiles/testSubstructMatch.dir/testSubstructMatch.cpp.o -o testSubstructMatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 56%] Built target testSubstructMatch
[ 57%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testFragCatalog.dir/link.d CMakeFiles/testFragCatalog.dir/test1.cpp.o -o testFragCatalog  ../../../lib/libRDKitFragCatalog.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 57%] Built target testFragCatalog
[ 57%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 57%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake "--color=" testAUTOCORR2D
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[ 57%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -MF CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o.d -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 57%] Linking CXX executable testChemTransforms
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testChemTransforms.dir/link.d CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -o testChemTransforms  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
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[ 57%] Built target testChemTransforms
[ 58%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
[ 58%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
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[ 58%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/testATF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/testATF.cpp.o -MF CMakeFiles/testATF.dir/testATF.cpp.o.d -o CMakeFiles/testATF.dir/testATF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testATF.cpp
[ 58%] Linking CXX executable chemTransformsTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemTransformsTestCatch.dir/link.txt --verbose=1
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 58%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
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[ 58%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testBCUT.dir/testBCUT.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testBCUT.dir/testBCUT.cpp.o -MF CMakeFiles/testBCUT.dir/testBCUT.cpp.o.d -o CMakeFiles/testBCUT.dir/testBCUT.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testBCUT.cpp
[ 58%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
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[ 58%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testEEM.dir/testEEM.cpp.o
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[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testPBF.dir/testPBF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testPBF.dir/testPBF.cpp.o -MF CMakeFiles/testPBF.dir/testPBF.cpp.o.d -o CMakeFiles/testPBF.dir/testPBF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testPBF.cpp
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
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[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o -MF CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o.d -o CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testRDFcustom.cpp
[ 59%] Linking CXX executable testAUTOCORR2D
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAUTOCORR2D.dir/link.d CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -o testAUTOCORR2D  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testAUTOCORR2D
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/DependInfo.cmake "--color=" testRDF
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/testRDF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/testRDF.cpp.o -MF CMakeFiles/testRDF.dir/testRDF.cpp.o.d -o CMakeFiles/testRDF.dir/testRDF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testRDF.cpp
[ 59%] Linking CXX executable fileParsersCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
[ 59%] Linking CXX executable testATF
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testATF.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testATF.dir/link.d CMakeFiles/testATF.dir/testATF.cpp.o -o testATF  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testATF
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fileParsersCatchTest.dir/link.d CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -o fileParsersCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target fileParsersCatchTest
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/DependInfo.cmake "--color=" testMORSE
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/testMORSE.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/testMORSE.cpp.o -MF CMakeFiles/testMORSE.dir/testMORSE.cpp.o.d -o CMakeFiles/testMORSE.dir/testMORSE.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testMORSE.cpp
[ 59%] Linking CXX executable testBCUT
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testBCUT.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testBCUT.dir/link.d CMakeFiles/testBCUT.dir/testBCUT.cpp.o -o testBCUT  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testBCUT
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
[ 59%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
[ 59%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdfragcatalog.dir/link.d  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o  ../../../../lib/libRDKitFragCatalog.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target rdfragcatalog
make  -f Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/DependInfo.cmake "--color=" test3D
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/test3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/test3D.cpp.o -MF CMakeFiles/test3D.dir/test3D.cpp.o.d -o CMakeFiles/test3D.dir/test3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/test3D.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/testWHIM.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testWHIM.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testWHIM.dir/DependInfo.cmake "--color=" testWHIM
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testWHIM.dir/testWHIM.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testWHIM.dir/testWHIM.cpp.o -MF CMakeFiles/testWHIM.dir/testWHIM.cpp.o.d -o CMakeFiles/testWHIM.dir/testWHIM.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testWHIM.cpp
[ 59%] Linking CXX executable testPBF
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPBF.dir/link.txt --verbose=1
make  -f Code/GraphMol/Descriptors/CMakeFiles/testGETAWAY.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testGETAWAY.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testGETAWAY.dir/DependInfo.cmake "--color=" testGETAWAY
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[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testGETAWAY.dir/testGETAWAY.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testGETAWAY.dir/testGETAWAY.cpp.o -MF CMakeFiles/testGETAWAY.dir/testGETAWAY.cpp.o.d -o CMakeFiles/testGETAWAY.dir/testGETAWAY.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testGETAWAY.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testPBF.dir/link.d CMakeFiles/testPBF.dir/testPBF.cpp.o -o testPBF  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testPBF
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/DependInfo.cmake "--color=" testAUTOCORR3D
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o -MF CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o.d -o CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testAUTOCORR3D.cpp
[ 59%] Linking CXX executable testEEM
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEEM.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testEEM.dir/link.d CMakeFiles/testEEM.dir/testEEM.cpp.o -o testEEM  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testEEM
make  -f Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/DependInfo.cmake "--color=" testCoulombMat
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o -MF CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o.d -o CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/testCoulombMat.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/descriptorsTestCatch.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/descriptorsTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/CMakeFiles/descriptorsTestCatch.dir/DependInfo.cmake "--color=" descriptorsTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/catch_tests.cpp
[ 59%] Linking CXX executable rxnTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
[ 59%] Linking CXX executable testRDF
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDF.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRDF.dir/link.d CMakeFiles/testRDF.dir/testRDF.cpp.o -o testRDF  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Built target testRDF
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake "--color=" rdMolDescriptors
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rxnTestCatch.dir/link.d CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -o rxnTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
[ 59%] Built target rxnTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -MF CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o.d -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake "--color=" testFingerprints
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make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o -MF CMakeFiles/testFingerprints.dir/test1.cpp.o.d -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/test1.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/DependInfo.cmake "--color=" testMHFPFingerprint
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 59%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -MF CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o.d -o CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/testMHFPFingerprint.cpp
[ 60%] Linking CXX executable testRDFcustom
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDFcustom.dir/link.txt --verbose=1
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake "--color=" testFingerprintGenerators
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 60%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -MF CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o.d -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRDFcustom.dir/link.d CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o -o testRDFcustom  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 60%] Built target testRDFcustom
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake "--color=" fpTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 60%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/catch_tests.cpp
[ 60%] Linking CXX executable testDescriptors
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testDescriptors.dir/link.d CMakeFiles/testDescriptors.dir/test.cpp.o -o testDescriptors  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 60%] Built target testDescriptors
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/DependInfo.cmake "--color=" fpGenTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 60%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -MF CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o.d -o CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp
[ 61%] Linking CXX executable testMORSE
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMORSE.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMORSE.dir/link.d CMakeFiles/testMORSE.dir/testMORSE.cpp.o -o testMORSE  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 61%] Built target testMORSE
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake "--color=" testMolTransforms
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 61%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o -MF CMakeFiles/testMolTransforms.dir/test1.cpp.o.d -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms/test1.cpp
make  -f Code/GraphMol/MolTransforms/CMakeFiles/molTransformsTestCatch.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/molTransformsTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms/CMakeFiles/molTransformsTestCatch.dir/DependInfo.cmake "--color=" molTransformsTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 61%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/molTransformsTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolTransforms/CMakeFiles/molTransformsTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/molTransformsTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/molTransformsTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms/catch_tests.cpp
[ 62%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
[ 62%] Linking CXX executable testCoulombMat
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoulombMat.dir/link.txt --verbose=1
[ 62%] Linking CXX executable testWHIM
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testWHIM.dir/link.txt --verbose=1
[ 62%] Linking CXX executable testAUTOCORR3D
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR3D.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolStandardize.dir/link.d -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 CMakeFiles/MolStandardize.dir/Pipeline.cpp.o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testCoulombMat.dir/link.d CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o -o testCoulombMat  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testCoulombMat
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/DependInfo.cmake "--color=" forceFieldHelpersCatch
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[ 62%] Built target MolStandardize
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/build
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
[ 62%] Linking CXX executable testGETAWAY
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGETAWAY.dir/link.txt --verbose=1
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake "--color=" testMMFFForceFieldHelpers
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
[ 62%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/catch_tests.cpp.o
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/forceFieldHelpersCatch.dir/catch_tests.cpp.o -MF CMakeFiles/forceFieldHelpersCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/forceFieldHelpersCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/catch_tests.cpp
[ 62%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -MF CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o.d -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testWHIM.dir/link.d CMakeFiles/testWHIM.dir/testWHIM.cpp.o -o testWHIM  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testWHIM
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake "--color=" testMMFFForceFieldHelpersMultiThread
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -MF CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o.d -o CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/MMFF/testMultiThread.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAUTOCORR3D.dir/link.d CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o -o testAUTOCORR3D  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testAUTOCORR3D
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/UFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake "--color=" testUFFForceFieldHelpers
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testGETAWAY.dir/link.d CMakeFiles/testGETAWAY.dir/testGETAWAY.cpp.o -o testGETAWAY  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testGETAWAY
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CrystalFF /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake "--color=" testCrystalForceField
[ 62%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -MF CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o.d -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -MF CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o.d -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 62%] Linking CXX executable testMHFPFingerprint
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMHFPFingerprint.dir/link.txt --verbose=1
[ 62%] Linking CXX executable test3D
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/test3D.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMHFPFingerprint.dir/link.d CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -o testMHFPFingerprint  ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testMHFPFingerprint
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake "--color=" testDistGeomHelpers
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/test3D.dir/link.d CMakeFiles/test3D.dir/test3D.cpp.o -o test3D  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target test3D
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/DependInfo.cmake "--color=" distGeomHelpersCatch
[ 62%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -MF CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o.d -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -MF CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/catch_tests.cpp
[ 62%] Linking CXX executable testMolTransforms
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
[ 62%] Linking CXX executable molTransformsTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTransformsTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolTransforms.dir/link.d CMakeFiles/testMolTransforms.dir/test1.cpp.o -o testMolTransforms  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testMolTransforms
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake "--color=" rdDistGeom
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_MAX_ARITY=32 -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -MF CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o.d -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molTransformsTestCatch.dir/link.d CMakeFiles/molTransformsTestCatch.dir/catch_tests.cpp.o -o molTransformsTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make  -f Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/DependInfo.cmake "--color=" O3AAlign
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[ 62%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DO3AAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o -MF CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o.d -o CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
[ 62%] Linking CXX executable testCrystalForceField
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
[ 62%] Linking CXX executable forceFieldHelpersCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/forceFieldHelpersCatch.dir/link.txt --verbose=1
[ 62%] Linking CXX executable testMMFFForceFieldHelpersMultiThread
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testCrystalForceField.dir/link.d CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -o testCrystalForceField  ../../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testCrystalForceField
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake "--color=" testMolAlign
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.d CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -o testMMFFForceFieldHelpersMultiThread  ../../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target testMMFFForceFieldHelpersMultiThread
make  -f Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/depend
[ 62%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/DependInfo.cmake "--color=" molAlignCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -MF CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o.d -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/testMolAlign.cpp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/forceFieldHelpersCatch.dir/link.d CMakeFiles/forceFieldHelpersCatch.dir/catch_tests.cpp.o -o forceFieldHelpersCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o
[ 62%] Built target forceFieldHelpersCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/catch_tests.cpp
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake "--color=" testFeatures
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o -MF CMakeFiles/testFeatures.dir/testFeatures.cpp.o.d -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
[ 62%] Linking CXX executable descriptorsTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/descriptorsTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/descriptorsTestCatch.dir/link.d CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o -o descriptorsTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Built target descriptorsTestCatch
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake "--color=" testShapeHelpers
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 62%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -MF CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o.d -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
[ 63%] Linking CXX executable fpGenTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpGenTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fpGenTestCatch.dir/link.d CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -o fpGenTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 63%] Built target fpGenTestCatch
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake "--color=" testMolCatalog
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 63%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o -MF CMakeFiles/testMolCatalog.dir/test1.cpp.o.d -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/test1.cpp
[ 63%] Linking CXX executable testMMFFForceFieldHelpers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMMFFForceFieldHelpers.dir/link.d CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -o testMMFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 63%] Built target testMMFFForceFieldHelpers
make  -f Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/build.make Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/DependInfo.cmake "--color=" testGaussianShape
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/build.make Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 64%] Building CXX object Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/GaussianShape/CMakeFiles/testGaussianShape.dir/catch_tests.cpp.o -MF CMakeFiles/testGaussianShape.dir/catch_tests.cpp.o.d -o CMakeFiles/testGaussianShape.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/catch_tests.cpp
[ 64%] Linking CXX executable fpTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fpTestCatch.dir/link.d CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -o fpTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 64%] Built target fpTestCatch
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake "--color=" MolDraw2D
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 64%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
[ 64%] Linking CXX executable testShapeHelpers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testShapeHelpers.dir/link.d CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -o testShapeHelpers  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitShapeHelpers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 64%] Built target testShapeHelpers
[ 64%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
[ 65%] Linking CXX executable molAlignCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/molAlignCatchTest.dir/link.txt --verbose=1
[ 65%] Linking CXX executable testMolAlign
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
[ 66%] Linking CXX executable testUFFForceFieldHelpers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molAlignCatchTest.dir/link.d CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -o molAlignCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 66%] Built target molAlignCatchTest
[ 66%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolAlign.dir/link.d CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -o testMolAlign  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
[ 66%] Built target testMolAlign
[ 66%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testUFFForceFieldHelpers.dir/link.d CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -o testUFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 66%] Built target testUFFForceFieldHelpers
[ 66%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDrawOptionsJSONParsers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDrawOptionsJSONParsers.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDrawOptionsJSONParsers.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDrawOptionsJSONParsers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDrawOptionsJSONParsers.cpp
[ 66%] Linking CXX executable testFingerprintGenerators
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testFingerprintGenerators.dir/link.d CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -o testFingerprintGenerators  ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 66%] Built target testFingerprintGenerators
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake "--color=" FMCS
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 66%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o -MF CMakeFiles/FMCS.dir/FMCS.cpp.o.d -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/FMCS.cpp
[ 66%] Linking CXX shared library ../../../lib/libRDKitO3AAlign.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/O3AAlign.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/O3AAlign.dir/link.d -Wl,-soname,libRDKitO3AAlign.so.1 -o ../../../lib/libRDKitO3AAlign.so.1.2026.03.4 CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o  ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitO3AAlign.so.1.2026.03.4 ../../../lib/libRDKitO3AAlign.so.1 ../../../lib/libRDKitO3AAlign.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 66%] Built target O3AAlign
[ 66%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o -MF CMakeFiles/FMCS.dir/Seed.cpp.o.d -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/Seed.cpp
[ 67%] Linking CXX executable testMolCatalog
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
[ 67%] Linking CXX executable testFeatures
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolCatalog.dir/link.d CMakeFiles/testMolCatalog.dir/test1.cpp.o -o testMolCatalog  ../../../lib/libRDKitMolCatalog.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 67%] Built target testMolCatalog
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake "--color=" molHashCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 67%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/catch_tests.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testFeatures.dir/link.d CMakeFiles/testFeatures.dir/testFeatures.cpp.o -o testFeatures  ../../../lib/libRDKitMolChemicalFeatures.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 67%] Built target testFeatures
[ 67%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o -MF CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o.d -o CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/AtomSymbol.cpp
[ 67%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdDistGeom.dir/link.d  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o  ../../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 67%] Built target rdDistGeom
[ 68%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawAnnotation.cpp
[ 68%] Linking CXX executable testDistGeomHelpers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testDistGeomHelpers.dir/link.d CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -o testDistGeomHelpers  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 68%] Built target testDistGeomHelpers
[ 68%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMol.cpp
[ 68%] Linking CXX executable testFingerprints
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testFingerprints.dir/link.d CMakeFiles/testFingerprints.dir/test1.cpp.o -o testFingerprints  ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 68%] Built target testFingerprints
[ 68%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/TargetMatch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/TargetMatch.cpp.o -MF CMakeFiles/FMCS.dir/TargetMatch.cpp.o.d -o CMakeFiles/FMCS.dir/TargetMatch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/TargetMatch.cpp
[ 68%] Linking CXX executable distGeomHelpersCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/distGeomHelpersCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/distGeomHelpersCatch.dir/link.d CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -o distGeomHelpersCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 68%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp
[ 68%] Built target distGeomHelpersCatch
[ 68%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -MF CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o.d -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake "--color=" MMPA
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 68%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o -MF CMakeFiles/MMPA.dir/MMPA.cpp.o.d -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/MMPA.cpp
[ 69%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -MF CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o.d -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 69%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCHCircleAndLine.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCHCircleAndLine.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMolMCHCircleAndLine.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMolMCHCircleAndLine.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHCircleAndLine.cpp
make  -f Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/DependInfo.cmake "--color=" RascalMCES
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 69%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalMCES.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalMCES.cpp.o -MF CMakeFiles/RascalMCES.dir/RascalMCES.cpp.o.d -o CMakeFiles/RascalMCES.dir/RascalMCES.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/RascalMCES.cpp
[ 69%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCHLasso.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCHLasso.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMolMCHLasso.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMolMCHLasso.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHLasso.cpp
[ 69%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawShape.cpp
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/DependInfo.cmake "--color=" MolEnumerator
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 69%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o -MF CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o.d -o CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.cpp
[ 69%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolDescriptors.dir/link.d  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 69%] Built target rdMolDescriptors
[ 69%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalCluster.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalCluster.cpp.o -MF CMakeFiles/RascalMCES.dir/RascalCluster.cpp.o.d -o CMakeFiles/RascalMCES.dir/RascalCluster.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/RascalCluster.cpp
make  -f Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/build.make Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/DependInfo.cmake "--color=" EnumerateStereoisomers
[ 69%] Linking CXX executable testReaction
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
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make  -f Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/build.make Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 69%] Building CXX object Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/EnumerateStereoisomers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEnumerateStereoisomers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_ENUMERATESTEREOISOMERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/EnumerateStereoisomers.cpp.o -MF CMakeFiles/EnumerateStereoisomers.dir/EnumerateStereoisomers.cpp.o.d -o CMakeFiles/EnumerateStereoisomers.dir/EnumerateStereoisomers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers/EnumerateStereoisomers.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testReaction.dir/link.d CMakeFiles/testReaction.dir/testReaction.cpp.o -o testReaction  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 69%] Built target testReaction
[ 69%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o -MF CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o.d -o CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/PositionVariation.cpp
[ 69%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalButinaCluster.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalButinaCluster.cpp.o -MF CMakeFiles/RascalMCES.dir/RascalButinaCluster.cpp.o.d -o CMakeFiles/RascalMCES.dir/RascalButinaCluster.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/RascalButinaCluster.cpp
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/DependInfo.cmake "--color=" Deprotect
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[ 69%] Building CXX object Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/Deprotect.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDeprotect_EXPORTS -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/Deprotect.cpp.o -MF CMakeFiles/Deprotect.dir/Deprotect.cpp.o.d -o CMakeFiles/Deprotect.dir/Deprotect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect/Deprotect.cpp
[ 69%] Building CXX object Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/Flippers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEnumerateStereoisomers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_ENUMERATESTEREOISOMERS_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/EnumerateStereoisomers/CMakeFiles/EnumerateStereoisomers.dir/Flippers.cpp.o -MF CMakeFiles/EnumerateStereoisomers.dir/Flippers.cpp.o.d -o CMakeFiles/EnumerateStereoisomers.dir/Flippers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers/Flippers.cpp
[ 69%] Linking CXX executable molHashCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/molHashCatchTest.dir/link.txt --verbose=1
[ 69%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o -MF CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o.d -o CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/LinkNode.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molHashCatchTest.dir/link.d CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -o molHashCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitMolHash.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 69%] Built target molHashCatchTest
[ 69%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/lap_a_la_scipy.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/lap_a_la_scipy.cpp.o -MF CMakeFiles/RascalMCES.dir/lap_a_la_scipy.cpp.o.d -o CMakeFiles/RascalMCES.dir/lap_a_la_scipy.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/lap_a_la_scipy.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Trajectory /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake "--color=" trajectoryTest
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[ 69%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -MF CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o.d -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Trajectory/trajectoryTest.cpp
[ 70%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o -MF CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o.d -o CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/RepeatUnit.cpp
[ 71%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MMPA.dir/link.d -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2026.03.4 CMakeFiles/MMPA.dir/MMPA.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2026.03.4 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Built target MMPA
[ 71%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawText.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawText.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawText.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawText.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawText.cpp
make  -f Code/GraphMol/DetermineBonds/CMakeFiles/DetermineBonds.dir/build.make Code/GraphMol/DetermineBonds/CMakeFiles/DetermineBonds.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DetermineBonds /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds/CMakeFiles/DetermineBonds.dir/DependInfo.cmake "--color=" DetermineBonds
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Building CXX object Code/GraphMol/DetermineBonds/CMakeFiles/DetermineBonds.dir/DetermineBonds.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DDetermineBonds_EXPORTS -DRDKIT_DETERMINEBONDS_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/DetermineBonds/CMakeFiles/DetermineBonds.dir/DetermineBonds.cpp.o -MF CMakeFiles/DetermineBonds.dir/DetermineBonds.cpp.o.d -o CMakeFiles/DetermineBonds.dir/DetermineBonds.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DetermineBonds/DetermineBonds.cpp
[ 71%] Linking CXX executable testGaussianShape
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GaussianShape && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGaussianShape.dir/link.txt --verbose=1
[ 71%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/PartitionSet.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/PartitionSet.cpp.o -MF CMakeFiles/RascalMCES.dir/PartitionSet.cpp.o.d -o CMakeFiles/RascalMCES.dir/PartitionSet.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/PartitionSet.cpp
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake "--color=" molInterchangeTest1
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[ 71%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -MF CMakeFiles/molInterchangeTest1.dir/test1.cpp.o.d -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/test1.cpp
[ 71%] Linking CXX shared library ../../../lib/libRDKitEnumerateStereoisomers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnumerateStereoisomers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testGaussianShape.dir/link.d CMakeFiles/testGaussianShape.dir/catch_tests.cpp.o -o testGaussianShape  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitGaussianShape.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitSimDivPickers.so.1.2026.03.4 ../../../lib/libRDKithc.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Built target testGaussianShape
[ 71%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalResult.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RASCALMCES_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/RascalMCES.dir/RascalResult.cpp.o -MF CMakeFiles/RascalMCES.dir/RascalResult.cpp.o.d -o CMakeFiles/RascalMCES.dir/RascalResult.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/RascalResult.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/EnumerateStereoisomers.dir/link.d -Wl,-soname,libRDKitEnumerateStereoisomers.so.1 -o ../../../lib/libRDKitEnumerateStereoisomers.so.1.2026.03.4 CMakeFiles/EnumerateStereoisomers.dir/EnumerateStereoisomers.cpp.o CMakeFiles/EnumerateStereoisomers.dir/Flippers.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEnumerateStereoisomers.so.1.2026.03.4 ../../../lib/libRDKitEnumerateStereoisomers.so.1 ../../../lib/libRDKitEnumerateStereoisomers.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Built target EnumerateStereoisomers
[ 71%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextNotFT.cpp
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/DependInfo.cmake "--color=" molInterchangeCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextSVG.cpp
[ 71%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -MF CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o.d -o CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/molinterchange_catch.cpp
[ 71%] Linking CXX shared library ../../../lib/libRDKitDeprotect.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_link_script CMakeFiles/Deprotect.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/Deprotect.dir/link.d -Wl,-soname,libRDKitDeprotect.so.1 -o ../../../lib/libRDKitDeprotect.so.1.2026.03.4 CMakeFiles/Deprotect.dir/Deprotect.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDeprotect.so.1.2026.03.4 ../../../lib/libRDKitDeprotect.so.1 ../../../lib/libRDKitDeprotect.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Built target Deprotect
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake "--color=" rdmolops
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 71%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o -MF CMakeFiles/rdmolops.dir/rdmolops.cpp.o.d -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdmolops.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake "--color=" molStandardizeTest
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make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 72%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o -MF CMakeFiles/molStandardizeTest.dir/test1.cpp.o.d -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/test1.cpp
[ 72%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DJS.cpp
[ 72%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o -MF CMakeFiles/rdmolops.dir/MolOps.cpp.o.d -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MolOps.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake "--color=" molNormalizeTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 72%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -MF CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o.d -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testNormalize.cpp
[ 72%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FMCS.dir/link.d -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2026.03.4 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/TargetMatch.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
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[ 72%] Built target FMCS
[ 72%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o -MF CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o.d -o CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/ChiralityOps.cpp
[ 72%] Linking CXX executable trajectoryTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/trajectoryTest.dir/link.d CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -o trajectoryTest  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 72%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextJS.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake "--color=" molValidateTest
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[ 72%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o -MF CMakeFiles/molValidateTest.dir/testValidate.cpp.o.d -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testValidate.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake "--color=" molChargeTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 72%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o -MF CMakeFiles/molChargeTest.dir/testCharge.cpp.o.d -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testCharge.cpp
[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DCairo.cpp
[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextCairo.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake "--color=" molTautomerTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 73%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -MF CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o.d -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 73%] Linking CXX shared library ../../../lib/libRDKitMolEnumerator.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolEnumerator.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolEnumerator.dir/link.d -Wl,-soname,libRDKitMolEnumerator.so.1 -o ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1 ../../../lib/libRDKitMolEnumerator.so
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[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFT.cpp
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake "--color=" molStandardizeSmallTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 73%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -MF CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o.d -o CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/test2.cpp
[ 73%] Linking CXX executable molNormalizeTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
[ 73%] Linking CXX executable molInterchangeTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molNormalizeTest.dir/link.d CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -o molNormalizeTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 73%] Built target molNormalizeTest
[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTSVG.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molInterchangeTest1.dir/link.d CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -o molInterchangeTest1  ../../../lib/libRDKitMolInterchange.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 73%] Built target molInterchangeTest1
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake "--color=" molFragmentTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 73%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -MF CMakeFiles/molFragmentTest.dir/testFragment.cpp.o.d -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testFragment.cpp
[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTJS.cpp
[ 73%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTCairo.cpp
[ 74%] Linking CXX shared library ../../../lib/libRDKitDetermineBonds.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds && /usr/bin/cmake -E cmake_link_script CMakeFiles/DetermineBonds.dir/link.txt --verbose=1
[ 75%] Linking CXX executable molInterchangeCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/DetermineBonds.dir/link.d -Wl,-soname,libRDKitDetermineBonds.so.1 -o ../../../lib/libRDKitDetermineBonds.so.1.2026.03.4 CMakeFiles/DetermineBonds.dir/DetermineBonds.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDetermineBonds.so.1.2026.03.4 ../../../lib/libRDKitDetermineBonds.so.1 ../../../lib/libRDKitDetermineBonds.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Built target DetermineBonds
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake "--color=" molStandardizeCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/catch_tests.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molInterchangeCatchTest.dir/link.d CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -o molInterchangeCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolInterchange.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Built target molInterchangeCatchTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/DependInfo.cmake "--color=" molStandardizePipelineTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/testPipeline.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molStandardizePipelineTest.dir/testPipeline.cpp.o -MF CMakeFiles/molStandardizePipelineTest.dir/testPipeline.cpp.o.d -o CMakeFiles/molStandardizePipelineTest.dir/testPipeline.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/testPipeline.cpp
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake "--color=" rdMolStandardize
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -MF CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 75%] Linking CXX executable molValidateTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
[ 75%] Linking CXX executable molStandardizeTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molValidateTest.dir/link.d CMakeFiles/molValidateTest.dir/testValidate.cpp.o -o molValidateTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Built target molValidateTest
[ 75%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Validate.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molStandardizeTest.dir/link.d CMakeFiles/molStandardizeTest.dir/test1.cpp.o -o molStandardizeTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Built target molStandardizeTest
[ 75%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Charge.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 75%] Linking CXX executable molChargeTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molChargeTest.dir/link.d CMakeFiles/molChargeTest.dir/testCharge.cpp.o -o molChargeTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Built target molChargeTest
[ 75%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/DependInfo.cmake "--color=" ScaffoldNetwork
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 75%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SCAFFOLDNETWORK_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DScaffoldNetwork_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o -MF CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o.d -o CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.cpp
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/DependInfo.cmake "--color=" testMolEnumerator
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 76%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
[ 76%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -MF CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o.d -o CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/enumerator_catch.cpp
[ 76%] Linking CXX shared library ../../../lib/libRDKitRascalMCES.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/cmake -E cmake_link_script CMakeFiles/RascalMCES.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/RascalMCES.dir/link.d -Wl,-soname,libRDKitRascalMCES.so.1 -o ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 CMakeFiles/RascalMCES.dir/RascalMCES.cpp.o CMakeFiles/RascalMCES.dir/RascalCluster.cpp.o CMakeFiles/RascalMCES.dir/RascalButinaCluster.cpp.o CMakeFiles/RascalMCES.dir/lap_a_la_scipy.cpp.o CMakeFiles/RascalMCES.dir/PartitionSet.cpp.o CMakeFiles/RascalMCES.dir/RascalResult.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../lib/libRDKitRascalMCES.so.1 ../../../lib/libRDKitRascalMCES.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 76%] Built target RascalMCES
[ 76%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Metal.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
make  -f Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/DependInfo.cmake "--color=" rdMolEnumerator
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 76%] Building CXX object Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolEnumerator_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o -MF CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o.d -o CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/Wrap/rdMolEnumerator.cpp
[ 76%] Linking CXX executable molStandardizeSmallTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molStandardizeSmallTest.dir/link.d CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -o molStandardizeSmallTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 76%] Built target molStandardizeSmallTest
[ 76%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Tautomer.cpp
[ 76%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolDraw2D.dir/link.d -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o CMakeFiles/MolDraw2D.dir/MolDrawOptionsJSONParsers.cpp.o CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o CMakeFiles/MolDraw2D.dir/DrawMolMCHCircleAndLine.cpp.o CMakeFiles/MolDraw2D.dir/DrawMolMCHLasso.cpp.o CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o CMakeFiles/MolDraw2D.dir/DrawText.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libfreetype.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcairo.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 76%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Pipeline.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Pipeline.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Pipeline.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Pipeline.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Pipeline.cpp
[ 76%] Linking CXX executable molFragmentTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molFragmentTest.dir/link.d CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -o molFragmentTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 76%] Built target molFragmentTest
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[ 77%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -MF CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o.d -o CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/catch_tests.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolProcessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing/CMakeFiles/MolProcessing.dir/DependInfo.cmake "--color=" MolProcessing
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[ 77%] Building CXX object Code/GraphMol/MolProcessing/CMakeFiles/MolProcessing.dir/MolProcessing.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMolProcessing_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLPROCESSING_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolProcessing/CMakeFiles/MolProcessing.dir/MolProcessing.cpp.o -MF CMakeFiles/MolProcessing.dir/MolProcessing.cpp.o.d -o CMakeFiles/MolProcessing.dir/MolProcessing.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolProcessing/MolProcessing.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields/CMakeFiles/testMIF.dir/DependInfo.cmake "--color=" testMIF
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolInteractionFields && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolInteractionFields/CMakeFiles/testMIF.dir/testMIF.cpp.o -MF CMakeFiles/testMIF.dir/testMIF.cpp.o.d -o CMakeFiles/testMIF.dir/testMIF.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/testMIF.cpp
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[ 78%] Building CXX object Code/Bench/CMakeFiles/bench.dir/bench_common.cpp.o
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[ 78%] Linking CXX shared library ../../../lib/libRDKitScaffoldNetwork.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/ScaffoldNetwork.dir/link.d -Wl,-soname,libRDKitScaffoldNetwork.so.1 -o ../../../lib/libRDKitScaffoldNetwork.so.1.2026.03.4 CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitScaffoldNetwork.so.1.2026.03.4 ../../../lib/libRDKitScaffoldNetwork.so.1 ../../../lib/libRDKitScaffoldNetwork.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Built target ScaffoldNetwork
[ 78%] Building CXX object Code/Bench/CMakeFiles/bench.dir/descriptors.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/descriptors.cpp.o -MF CMakeFiles/bench.dir/descriptors.cpp.o.d -o CMakeFiles/bench.dir/descriptors.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/descriptors.cpp
make  -f Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/build.make Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/DependInfo.cmake "--color=" MarvinParser
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/build.make Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Building CXX object Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinParser.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMarvinParser_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MARVINPARSER_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinParser.cpp.o -MF CMakeFiles/MarvinParser.dir/MarvinParser.cpp.o.d -o CMakeFiles/MarvinParser.dir/MarvinParser.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinParser.cpp
[ 78%] Building CXX object Code/Bench/CMakeFiles/bench.dir/fingerprint.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/fingerprint.cpp.o -MF CMakeFiles/bench.dir/fingerprint.cpp.o.d -o CMakeFiles/bench.dir/fingerprint.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/fingerprint.cpp
[ 78%] Building CXX object Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMarvinParser_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MARVINPARSER_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinWriter.cpp.o -MF CMakeFiles/MarvinParser.dir/MarvinWriter.cpp.o.d -o CMakeFiles/MarvinParser.dir/MarvinWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinWriter.cpp
[ 78%] Linking CXX executable molTautomerTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molTautomerTest.dir/link.d CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -o molTautomerTest  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Built target molTautomerTest
[ 78%] Building CXX object Code/Bench/CMakeFiles/bench.dir/meta.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/meta.cpp.o -MF CMakeFiles/bench.dir/meta.cpp.o.d -o CMakeFiles/bench.dir/meta.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/meta.cpp
[ 78%] Linking CXX executable molStandardizePipelineTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizePipelineTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molStandardizePipelineTest.dir/link.d CMakeFiles/molStandardizePipelineTest.dir/testPipeline.cpp.o -o molStandardizePipelineTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Built target molStandardizePipelineTest
[ 78%] Building CXX object Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinDefs.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMarvinParser_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MARVINPARSER_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MarvinParse/CMakeFiles/MarvinParser.dir/MarvinDefs.cpp.o -MF CMakeFiles/MarvinParser.dir/MarvinDefs.cpp.o.d -o CMakeFiles/MarvinParser.dir/MarvinDefs.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinDefs.cpp
[ 78%] Linking CXX shared module ../../../../rdkit/Chem/rdMolEnumerator.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolEnumerator.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolEnumerator.dir/link.d  -o ../../../../rdkit/Chem/rdMolEnumerator.so CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o  ../../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Built target rdMolEnumerator
[ 78%] Building CXX object Code/Bench/CMakeFiles/bench.dir/mol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/mol.cpp.o -MF CMakeFiles/bench.dir/mol.cpp.o.d -o CMakeFiles/bench.dir/mol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/mol.cpp
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/TautomerQuery /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/DependInfo.cmake "--color=" TautomerQuery
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 78%] Building CXX object Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_TAUTOMERQUERY_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DTautomerQuery_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o -MF CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o.d -o CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/TautomerQuery/TautomerQuery.cpp
[ 79%] Linking CXX shared library ../../../lib/libRDKitMolProcessing.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolProcessing.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/MolProcessing.dir/link.d -Wl,-soname,libRDKitMolProcessing.so.1 -o ../../../lib/libRDKitMolProcessing.so.1.2026.03.4 CMakeFiles/MolProcessing.dir/MolProcessing.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitRDStreams.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolProcessing.so.1.2026.03.4 ../../../lib/libRDKitMolProcessing.so.1 ../../../lib/libRDKitMolProcessing.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Built target MolProcessing
[ 79%] Building CXX object Code/Bench/CMakeFiles/bench.dir/molops.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/molops.cpp.o -MF CMakeFiles/bench.dir/molops.cpp.o.d -o CMakeFiles/bench.dir/molops.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/molops.cpp
make  -f Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/DependInfo.cmake "--color=" testO3AAlign
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -MF CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o.d -o CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/testO3AAlign.cpp
[ 79%] Building CXX object Code/Bench/CMakeFiles/bench.dir/pickle.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/pickle.cpp.o -MF CMakeFiles/bench.dir/pickle.cpp.o.d -o CMakeFiles/bench.dir/pickle.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/pickle.cpp
[ 79%] Linking CXX executable testAbbreviations
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAbbreviations.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testAbbreviations.dir/link.d CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -o testAbbreviations  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitAbbreviations.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Built target testAbbreviations
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake "--color=" rdMolAlign
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make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -MF CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o.d -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake "--color=" moldraw2DTest1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -MF CMakeFiles/moldraw2DTest1.dir/test1.cpp.o.d -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/test1.cpp
[ 79%] Linking CXX executable testMolEnumerator
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolEnumerator.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolEnumerator.dir/link.d CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -o testMolEnumerator  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Built target testMolEnumerator
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake "--color=" moldraw2DTestCatch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 79%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/catch_tests.cpp
In file included from /usr/include/c++/15/string:56,
                 from /usr/include/c++/15/bits/locale_classes.h:42,
                 from /usr/include/c++/15/bits/ios_base.h:43,
                 from /usr/include/c++/15/ios:46,
                 from /usr/include/c++/15/bits/ostream.h:43,
                 from /usr/include/c++/15/bits/unique_ptr.h:42,
                 from /usr/include/c++/15/memory:80,
                 from /usr/include/boost/config/no_tr1/memory.hpp:21,
                 from /usr/include/boost/get_pointer.hpp:14,
                 from /usr/include/boost/python/object/pointer_holder.hpp:11,
                 from /usr/include/boost/python/to_python_indirect.hpp:10,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:10,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/object/class.hpp:9,
                 from /usr/include/boost/python/class.hpp:13,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:9,
                 from /usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:9,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Wrap/Tautomer.cpp:11:
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::append(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1536:28,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator+=(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1478:28,
    inlined from ‘static void boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::extension_def(Class&) [with Class = boost::python::class_<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, boost::noncopyable_::noncopyable>; Container = std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_map_derived_policies<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, true>]’ at /usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:77:23:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&class_name_extractor + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/usr/include/boost/python/suite/indexing/map_indexing_suite.hpp: In static member function ‘static void boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::extension_def(Class&) [with Class = boost::python::class_<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, boost::noncopyable_::noncopyable>; Container = std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_map_derived_policies<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, true>]’:
/usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:76:34: note: ‘class_name_extractor’ declared here
   76 |             extract<std::string> class_name_extractor(class_name);
      |                                  ^~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake "--color=" moldraw2DRxnTest1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 80%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/usr/include/freetype2 -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -MF CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o.d -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 80%] Linking CXX executable molStandardizeCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeCatchTest.dir/link.txt --verbose=1
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘static boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::index_type boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::convert_index(Container&, PyObject*) [with Container = std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_map_derived_policies<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, true>]’ at /usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:170:30:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&i + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/usr/include/boost/python/suite/indexing/map_indexing_suite.hpp: In function ‘static boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::index_type boost::python::map_indexing_suite<Container, NoProxy, DerivedPolicies>::convert_index(Container&, PyObject*) [with Container = std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_map_derived_policies<std::map<std::__cxx11::basic_string<char>, RDKit::MolStandardize::Tautomer>, true>]’:
/usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:168:35: note: ‘i’ declared here
  168 |                 extract<key_type> i(i_);
      |                                   ^
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/molStandardizeCatchTest.dir/link.d CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -o molStandardizeCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/smiles.cpp.o -MF CMakeFiles/bench.dir/smiles.cpp.o.d -o CMakeFiles/bench.dir/smiles.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/smiles.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -MF CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o.d -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/testFMCS_Unit.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FMCS/CMakeFiles/testFMCSCatch.dir/testFMCS_catch_tests.cpp.o -MF CMakeFiles/testFMCSCatch.dir/testFMCS_catch_tests.cpp.o.d -o CMakeFiles/testFMCSCatch.dir/testFMCS_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/testFMCS_catch_tests.cpp
[ 81%] Building CXX object Code/Bench/CMakeFiles/bench.dir/substruct_match.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/substruct_match.cpp.o -MF CMakeFiles/bench.dir/substruct_match.cpp.o.d -o CMakeFiles/bench.dir/substruct_match.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/substruct_match.cpp
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
[ 81%] Linking CXX shared library ../../../lib/libRDKitTautomerQuery.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_link_script CMakeFiles/TautomerQuery.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/TautomerQuery.dir/link.d -Wl,-soname,libRDKitTautomerQuery.so.1 -o ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o  ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1 ../../../lib/libRDKitTautomerQuery.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Built target TautomerQuery
[ 81%] Building CXX object Code/Bench/CMakeFiles/bench.dir/inchi.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/Bench && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/Bench/CMakeFiles/bench.dir/inchi.cpp.o -MF CMakeFiles/bench.dir/inchi.cpp.o.d -o CMakeFiles/bench.dir/inchi.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Bench/inchi.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolStandardize.dir/link.d  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o CMakeFiles/rdMolStandardize.dir/Pipeline.cpp.o  ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Built target rdMolStandardize
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake "--color=" rdFMCS
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -MF CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o.d -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/Test /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Test /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake "--color=" FMCStest
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[ 81%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Test && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o -MF CMakeFiles/FMCStest.dir/testFMCS.cpp.o.d -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FMCS/Test/testFMCS.cpp
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake "--color=" testMMPA
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[ 81%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -MF CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o.d -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 81%] Linking CXX executable testO3AAlign
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testO3AAlign.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testO3AAlign.dir/link.d CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -o testO3AAlign  ../../../lib/libRDKitO3AAlign.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Built target testO3AAlign
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make  -f Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake "--color=" rdMMPA
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/DependInfo.cmake "--color=" testRascalMCES
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/build
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
[ 81%] Linking CXX executable moldraw2DRxnTest1
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
[ 81%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/mces_catch.cpp.o
[ 81%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -MF CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o.d -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/testRascalMCES.dir/mces_catch.cpp.o -MF CMakeFiles/testRascalMCES.dir/mces_catch.cpp.o.d -o CMakeFiles/testRascalMCES.dir/mces_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/mces_catch.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/moldraw2DRxnTest1.dir/link.d CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -o moldraw2DRxnTest1  ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcairo.so /usr/lib/x86_64-linux-gnu/libfreetype.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Built target moldraw2DRxnTest1
make  -f Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/DependInfo.cmake "--color=" testRascalCluster
[ 81%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/build.make Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Building CXX object Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/mces_cluster_catch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RascalMCES/CMakeFiles/testRascalCluster.dir/mces_cluster_catch.cpp.o -MF CMakeFiles/testRascalCluster.dir/mces_cluster_catch.cpp.o.d -o CMakeFiles/testRascalCluster.dir/mces_cluster_catch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/mces_cluster_catch.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdmolops.dir/link.d  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 81%] Built target rdmolops
make  -f Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/build.make Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/DependInfo.cmake "--color=" rdRascalMCES
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/build.make Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Building CXX object Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/rdRascalMCES.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRascalMCES_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RascalMCES/Wrap/CMakeFiles/rdRascalMCES.dir/rdRascalMCES.cpp.o -MF CMakeFiles/rdRascalMCES.dir/rdRascalMCES.cpp.o.d -o CMakeFiles/rdRascalMCES.dir/rdRascalMCES.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/Wrap/rdRascalMCES.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GeneralizedSubstruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct/CMakeFiles/GeneralizedSubstruct.dir/DependInfo.cmake "--color=" GeneralizedSubstruct
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Building CXX object Code/GraphMol/GeneralizedSubstruct/CMakeFiles/GeneralizedSubstruct.dir/XQMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGeneralizedSubstruct_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GENERALIZEDSUBSTRUCT_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GeneralizedSubstruct/CMakeFiles/GeneralizedSubstruct.dir/XQMol.cpp.o -MF CMakeFiles/GeneralizedSubstruct.dir/XQMol.cpp.o.d -o CMakeFiles/GeneralizedSubstruct.dir/XQMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GeneralizedSubstruct/XQMol.cpp
make  -f Code/GraphMol/EnumerateStereoisomers/CMakeFiles/testEnumerateStereoisomers.dir/build.make Code/GraphMol/EnumerateStereoisomers/CMakeFiles/testEnumerateStereoisomers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/CMakeFiles/testEnumerateStereoisomers.dir/DependInfo.cmake "--color=" testEnumerateStereoisomers
[ 82%] Linking CXX executable bench
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Building CXX object Code/GraphMol/EnumerateStereoisomers/CMakeFiles/testEnumerateStereoisomers.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/EnumerateStereoisomers/CMakeFiles/testEnumerateStereoisomers.dir/catch_tests.cpp.o -MF CMakeFiles/testEnumerateStereoisomers.dir/catch_tests.cpp.o.d -o CMakeFiles/testEnumerateStereoisomers.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers/catch_tests.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/bench.dir/link.d CMakeFiles/bench.dir/bench_common.cpp.o CMakeFiles/bench.dir/descriptors.cpp.o CMakeFiles/bench.dir/fingerprint.cpp.o CMakeFiles/bench.dir/meta.cpp.o CMakeFiles/bench.dir/mol.cpp.o CMakeFiles/bench.dir/molops.cpp.o CMakeFiles/bench.dir/pickle.cpp.o CMakeFiles/bench.dir/smiles.cpp.o CMakeFiles/bench.dir/stereo.cpp.o CMakeFiles/bench.dir/substruct_match.cpp.o CMakeFiles/bench.dir/inchi.cpp.o -o bench  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../lib/libRDKitRDInchiLib.so.1.2026.03.4 /usr/lib/libCatch2.a ../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../lib/libRDKitChemTransforms.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../lib/libRDKitSubgraphs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libinchi.so ../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../lib/libRDKitAlignment.so.1.2026.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 82%] Built target bench
[ 82%] Building CXX object Code/GraphMol/GeneralizedSubstruct/CMakeFiles/GeneralizedSubstruct.dir/TextIO.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DGeneralizedSubstruct_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GENERALIZEDSUBSTRUCT_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/GeneralizedSubstruct/CMakeFiles/GeneralizedSubstruct.dir/TextIO.cpp.o -MF CMakeFiles/GeneralizedSubstruct.dir/TextIO.cpp.o.d -o CMakeFiles/GeneralizedSubstruct.dir/TextIO.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GeneralizedSubstruct/TextIO.cpp
[ 82%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMolAlign.dir/link.d  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o  ../../../../lib/libRDKitO3AAlign.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Built target rdMolAlign
make  -f Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/build.make Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/DependInfo.cmake "--color=" rdEnumerateStereoisomers
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/build.make Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Building CXX object Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/rdEnumerateStereoisomers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdEnumerateStereoisomers_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/EnumerateStereoisomers/Wrap/CMakeFiles/rdEnumerateStereoisomers.dir/rdEnumerateStereoisomers.cpp.o -MF CMakeFiles/rdEnumerateStereoisomers.dir/rdEnumerateStereoisomers.cpp.o.d -o CMakeFiles/rdEnumerateStereoisomers.dir/rdEnumerateStereoisomers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/EnumerateStereoisomers/Wrap/rdEnumerateStereoisomers.cpp
[ 82%] Linking CXX executable testMMPA
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMMPA.dir/link.d CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -o testMMPA  ../../../lib/libRDKitMMPA.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 82%] Built target testMMPA
make  -f Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/build.make Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/DependInfo.cmake "--color=" deprotectTest
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 83%] Building CXX object Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -MF CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o.d -o CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect/deprotectTest.cpp
[ 83%] Linking CXX executable FMCStest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/FMCStest.dir/link.d CMakeFiles/FMCStest.dir/testFMCS.cpp.o -o FMCStest  ../../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 83%] Built target FMCStest
make  -f Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/build.make Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DependInfo.cmake "--color=" rdDeprotect
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 84%] Building CXX object Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDeprotect_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o -MF CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o.d -o CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect/Wrap/rdDeprotect.cpp
[ 84%] Linking CXX executable testRascalCluster
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRascalCluster.dir/link.txt --verbose=1
[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRascalCluster.dir/link.d CMakeFiles/testRascalCluster.dir/mces_cluster_catch.cpp.o -o testRascalCluster  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 84%] Built target testRascalCluster
[ 84%] Building CXX object Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDeprotect_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o -MF CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o.d -o CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Deprotect/Wrap/DeprotectWrap.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdMMPA.dir/link.d  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o  ../../../../lib/libRDKitMMPA.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 84%] Built target rdMMPA
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake "--color=" RGroupDecomposition
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
[ 84%] Linking CXX shared library ../../../lib/libRDKitMarvinParser.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/MarvinParser.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 ../../../lib/libRDKitMarvinParser.so.1 ../../../lib/libRDKitMarvinParser.so
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[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o
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[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdRascalMCES.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRascalMCES.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdRascalMCES.dir/link.d  -o ../../../../rdkit/Chem/rdRascalMCES.so CMakeFiles/rdRascalMCES.dir/rdRascalMCES.cpp.o  ../../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupData.cpp
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[ 84%] Building CXX object Code/GraphMol/DetermineBonds/Wrap/CMakeFiles/rdDetermineBonds.dir/rdDetermineBonds.cpp.o
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[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
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/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdFMCS.dir/link.d  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o  ../../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 84%] Built target testFMCS
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake "--color=" rdchem
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupUtils.cpp
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[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdEnumerateStereoisomers.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o -MF CMakeFiles/rdchem.dir/rdchem.cpp.o.d -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdchem.cpp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdEnumerateStereoisomers.dir/link.txt --verbose=1
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[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o -MF CMakeFiles/rdchem.dir/Table.cpp.o.d -o CMakeFiles/rdchem.dir/Table.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/Table.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RascalMCES && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRascalMCES.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_link_script CMakeFiles/deprotectTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRascalMCES.dir/link.d CMakeFiles/testRascalMCES.dir/mces_catch.cpp.o -o testRascalMCES  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupCore.cpp
[ 86%] Linking CXX executable testEnumerateStereoisomers
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/EnumerateStereoisomers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumerateStereoisomers.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/deprotectTest.dir/link.d CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -o deprotectTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDeprotect.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target deprotectTest
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o -MF CMakeFiles/rdchem.dir/Atom.cpp.o.d -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/Atom.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testEnumerateStereoisomers.dir/link.d CMakeFiles/testEnumerateStereoisomers.dir/catch_tests.cpp.o -o testEnumerateStereoisomers  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitEnumerateStereoisomers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target testEnumerateStereoisomers
[ 86%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupDecompParams.cpp
[ 86%] Linking CXX shared library ../../../lib/libRDKitGeneralizedSubstruct.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/GeneralizedSubstruct.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/GeneralizedSubstruct.dir/link.d -Wl,-soname,libRDKitGeneralizedSubstruct.so.1 -o ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 CMakeFiles/GeneralizedSubstruct.dir/XQMol.cpp.o CMakeFiles/GeneralizedSubstruct.dir/TextIO.cpp.o  ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitGeneralizedSubstruct.so.1 ../../../lib/libRDKitGeneralizedSubstruct.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target GeneralizedSubstruct
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake "--color=" rdmolfiles
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -MF CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o.d -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 86%] Linking CXX executable moldraw2DTest1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/moldraw2DTest1.dir/link.d CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -o moldraw2DTest1  ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcairo.so /usr/lib/x86_64-linux-gnu/libfreetype.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target moldraw2DTest1
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o -MF CMakeFiles/rdchem.dir/Bond.cpp.o.d -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/Bond.cpp
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/rdDetermineBonds.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDetermineBonds.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdDetermineBonds.dir/link.d  -o ../../../../rdkit/Chem/rdDetermineBonds.so CMakeFiles/rdDetermineBonds.dir/rdDetermineBonds.cpp.o  ../../../../lib/libRDKitDetermineBonds.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target rdDetermineBonds
[ 86%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupScore.cpp
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/rdDeprotect.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Deprotect/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDeprotect.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdDeprotect.dir/link.d  -o ../../../../rdkit/Chem/rdDeprotect.so CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o  ../../../../lib/libRDKitDeprotect.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target rdDeprotect
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
[ 86%] Linking CXX executable determineBondsCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/DetermineBonds && /usr/bin/cmake -E cmake_link_script CMakeFiles/determineBondsCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/determineBondsCatchTest.dir/link.d CMakeFiles/determineBondsCatchTest.dir/catch_tests.cpp.o -o determineBondsCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDetermineBonds.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitDistGeometry.so.1.2026.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitForceField.so.1.2026.03.4 ../../../lib/libRDKitOptimizer.so.1.2026.03.4 ../../../lib/libRDKitTrajectory.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target determineBondsCatchTest
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/DependInfo.cmake "--color=" testScaffoldNetwork
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -MF CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o.d -o CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork/catch_tests.cpp
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o -MF CMakeFiles/rdchem.dir/Mol.cpp.o.d -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/Mol.cpp
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MaeMolSupplier.cpp
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/DependInfo.cmake "--color=" rdScaffoldNetwork
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Building CXX object Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdScaffoldNetwork_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o -MF CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o.d -o CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ScaffoldNetwork/Wrap/rdScaffoldNetwork.cpp
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MaeWriter.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GeneralizedSubstruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct/CMakeFiles/generalizedSubstructCatch.dir/DependInfo.cmake "--color=" generalizedSubstructCatch
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o -MF CMakeFiles/rdchem.dir/Conformer.cpp.o.d -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/Conformer.cpp
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[ 86%] Building CXX object Code/GraphMol/GeneralizedSubstruct/CMakeFiles/generalizedSubstructCatch.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/GeneralizedSubstruct/CMakeFiles/generalizedSubstructCatch.dir/catch_tests.cpp.o -MF CMakeFiles/generalizedSubstructCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/generalizedSubstructCatch.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GeneralizedSubstruct/catch_tests.cpp
In file included from /usr/include/c++/15/string:56,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/Invariant.h:17,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RDKitBase.h:21,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdchem.cpp:12:
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘PyObject* createExceptionClass(const char*, PyObject*)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdchem.cpp:104:68:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdchem.cpp: In function ‘PyObject* createExceptionClass(const char*, PyObject*)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/rdchem.cpp:104:68: note: ‘<anonymous>’ declared here
  104 |       python::extract<std::string>(python::scope().attr("__name__"));
      |                                                                    ^
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupFingerprintScore.cpp
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[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
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[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
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/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMolProcessing.dir/link.d CMakeFiles/testMolProcessing.dir/processing_tests.cpp.o -o testMolProcessing  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolProcessing.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDStreams.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
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[ 86%] Built target testMolProcessing
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -MF CMakeFiles/rdchem.dir/MonomerInfo.cpp.o.d -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 86%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompJSONParsers.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompJSONParsers.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecompJSONParsers.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecompJSONParsers.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupDecompJSONParsers.cpp
make  -f Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/build.make Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/DependInfo.cmake "--color=" rdkit
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/build.make Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Building CXX object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/adapter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
[ 86%] Linking CXX executable generalizedSubstructCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/generalizedSubstructCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/generalizedSubstructCatch.dir/link.d CMakeFiles/generalizedSubstructCatch.dir/catch_tests.cpp.o -o generalizedSubstructCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Built target generalizedSubstructCatch
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/rdGeneralizedSubstruct.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GeneralizedSubstruct/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeneralizedSubstruct.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdGeneralizedSubstruct.dir/link.d  -o ../../../../rdkit/Chem/rdGeneralizedSubstruct.so CMakeFiles/rdGeneralizedSubstruct.dir/rdGeneralizedSubstruct.cpp.o  ../../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 86%] Linking CXX executable testScaffoldNetwork
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/testScaffoldNetwork.dir/link.txt --verbose=1
[ 86%] Built target rdGeneralizedSubstruct
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
[ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdScaffoldNetwork.dir/link.txt --verbose=1
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -MF CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o.d -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdScaffoldNetwork.dir/link.d  -o ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o  ../../../../lib/libRDKitScaffoldNetwork.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 87%] Built target rdScaffoldNetwork
[ 87%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/bfp_op.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testScaffoldNetwork.dir/link.d CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -o testScaffoldNetwork  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitScaffoldNetwork.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 87%] Built target testScaffoldNetwork
[ 87%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/cache.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
[ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o -MF CMakeFiles/rdchem.dir/MolBundle.cpp.o.d -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MolBundle.cpp
[ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/SmilesWriter.cpp
[ 87%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/guc.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake "--color=" cxsmilesTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 87%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -MF CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o.d -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp: In function ‘void* makeAvalonBFP(CROMol, bool, unsigned int)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp:1637:38: warning: unused parameter ‘data’ [-Wunused-parameter]
 1637 | extern "C" CBfp makeAvalonBFP(CROMol data, bool isQuery,
      |                               ~~~~~~~^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp:1637:49: warning: unused parameter ‘isQuery’ [-Wunused-parameter]
 1637 | extern "C" CBfp makeAvalonBFP(CROMol data, bool isQuery,
      |                                            ~~~~~^~~~~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp:1638:44: warning: unused parameter ‘bitFlags’ [-Wunused-parameter]
 1638 |                               unsigned int bitFlags) {
      |                               ~~~~~~~~~~~~~^~~~~~~~
[ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o -MF CMakeFiles/rdchem.dir/StereoGroup.cpp.o.d -o CMakeFiles/rdchem.dir/StereoGroup.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/StereoGroup.cpp
[ 88%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/low_gist.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
make  -f Code/GraphMol/MarvinParse/CMakeFiles/testMrvToMol.dir/build.make Code/GraphMol/MarvinParse/CMakeFiles/testMrvToMol.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse/CMakeFiles/testMrvToMol.dir/DependInfo.cmake "--color=" testMrvToMol
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 89%] Building CXX object Code/GraphMol/MarvinParse/CMakeFiles/testMrvToMol.dir/testMrvToMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/MarvinParse/CMakeFiles/testMrvToMol.dir/testMrvToMol.cpp.o -MF CMakeFiles/testMrvToMol.dir/testMrvToMol.cpp.o.d -o CMakeFiles/testMrvToMol.dir/testMrvToMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/testMrvToMol.cpp
[ 89%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/SDWriter.cpp
[ 90%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/TDTWriter.cpp
[ 91%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MolProcessing/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolProcessing.dir/link.txt --verbose=1
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make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 91%] Built target rdMolProcessing
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GenericGroups /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/DependInfo.cmake "--color=" testGenericGroups
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 91%] Building CXX object Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -MF CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o.d -o CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GenericGroups/generic_tests.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2026.03.4 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -MF CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o.d -o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/SubstanceGroup.cpp
[ 91%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/mol_op.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
[ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/PDBWriter.cpp
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[ 92%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/bfp_gist.c.o
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdTautomerQuery_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o -MF CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o.d -o CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/TautomerQuery/Wrap/rdTautomerQuery.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/bfp_gin.c.o -MF CMakeFiles/rdkit.dir/bfp_gin.c.o.d -o CMakeFiles/rdkit.dir/bfp_gin.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gin.c
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/bitstring.c.o -MF CMakeFiles/rdkit.dir/bitstring.c.o.d -o CMakeFiles/rdkit.dir/bitstring.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bitstring.c
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/moldraw2DTestCatch.dir/link.d CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -o moldraw2DTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libcairo.so /usr/lib/x86_64-linux-gnu/libfreetype.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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[ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MultithreadedSmilesMolSupplier.cpp
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
[ 92%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/rxn_op.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/rxn_op.c.o -MF CMakeFiles/rdkit.dir/rxn_op.c.o.d -o CMakeFiles/rdkit.dir/rxn_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rxn_op.c
[ 92%] Building C object Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/sfp_op.c.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/x86_64-linux-gnu-gcc -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKITVER=\"007700\" -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_INCHI_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_MOLINTERCHANGE_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_TOOLKIT_VERSION=\"2026.03.4\" -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/usr/include/postgresql -I/usr/include/postgresql/18/server -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/include/freetype2 -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -std=gnu99 -fPIC -MD -MT Code/PgSQL/rdkit/CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
[ 92%] Linking CXX shared library librdkit.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o   -L/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/lib  /usr/lib/x86_64-linux-gnu/libpq.so ../../../lib/libRDKitRDInchiLib.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libinchi.so ../../../lib/libRDKitMolInterchange.so.1.2026.03.4 ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolDraw2D.so.1.2026.03.4 ../../../lib/libRDKitMolHash.so.1.2026.03.4 ../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcairo.so /usr/lib/x86_64-linux-gnu/libfreetype.so ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/cmake -E copy_directory /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sql /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit/sql
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/cmake -E copy_directory /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/data /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit/data
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit && /usr/bin/cmake -E copy_directory /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/expected /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/PgSQL/rdkit/expected
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 92%] Built target rdkit
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/DependInfo.cmake "--color=" SynthonSpaceSearch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 92%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearch_details.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearch_details.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearch_details.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearch_details.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSearch_details.cpp
[ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Wrap/MultithreadedSDMolSupplier.cpp
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake "--color=" SubstructLibrary
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make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 92%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -MF CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o.d -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
[ 92%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpace.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpace.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpace.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpace.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpace.cpp
[ 92%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o -MF CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o.d -o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/PatternFactory.cpp
make  -f Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/DependInfo.cmake "--color=" testCIPLabeler
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 93%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o -MF CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/catch_tests.cpp
[ 93%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSet.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSet.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSet.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSet.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSet.cpp
[ 93%] Linking CXX executable testGenericGroups
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGenericGroups.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testGenericGroups.dir/link.d CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -o testGenericGroups  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 93%] Built target testGenericGroups
[ 93%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/Synthon.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/Synthon.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/Synthon.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/Synthon.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/Synthon.cpp
[ 93%] Linking CXX executable cxsmilesTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/cxsmilesTest.dir/link.d CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -o cxsmilesTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 93%] Built target cxsmilesTest
[ 93%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearcher.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearcher.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearcher.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearcher.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSearcher.cpp
[ 93%] Linking CXX executable testMrvToMol
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/MarvinParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMrvToMol.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testMrvToMol.dir/link.d CMakeFiles/testMrvToMol.dir/testMrvToMol.cpp.o -o testMrvToMol  ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 93%] Built target testMrvToMol
[ 93%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o -MF CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/CIPMol.cpp
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake "--color=" testRGroupDecomp
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 93%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -MF CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o.d -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
[ 94%] Linking CXX executable tautomerQueryTestCatch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_link_script CMakeFiles/tautomerQueryTestCatch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/tautomerQueryTestCatch.dir/link.d CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o -o tautomerQueryTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 94%] Built target tautomerQueryTestCatch
[ 94%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSubstructureSearcher.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSubstructureSearcher.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSubstructureSearcher.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSubstructureSearcher.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSubstructureSearcher.cpp
[ 94%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdmolfiles.dir/link.d  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o  ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 94%] Built target rdmolfiles
[ 94%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o -MF CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/CIPLabeler.cpp
[ 95%] Linking CXX shared module ../../../../rdkit/Chem/rdTautomerQuery.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/TautomerQuery/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdTautomerQuery.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdTautomerQuery.dir/link.d  -o ../../../../rdkit/Chem/rdTautomerQuery.so CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o  ../../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 95%] Built target rdTautomerQuery
[ 95%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceFingerprintSearcher.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceFingerprintSearcher.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceFingerprintSearcher.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceFingerprintSearcher.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceFingerprintSearcher.cpp
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/DependInfo.cmake "--color=" testRGroupDecompInternals
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 95%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o -MF CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o.d -o CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/testRGroupInternals.cpp
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/DependInfo.cmake "--color=" rgroupCatchTests
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 95%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -MF CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o.d -o CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/catch_rgd.cpp
[ 96%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceRascalSearcher.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceRascalSearcher.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceRascalSearcher.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceRascalSearcher.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceRascalSearcher.cpp
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[ 97%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/gaExample.dir/GaExample.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/gaExample.dir/GaExample.cpp.o -MF CMakeFiles/gaExample.dir/GaExample.cpp.o.d -o CMakeFiles/gaExample.dir/GaExample.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/GaExample.cpp
[ 97%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
[ 97%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceHitSet.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceHitSet.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceHitSet.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceHitSet.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceHitSet.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdchem.dir/link.d  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o CMakeFiles/rdchem.dir/StereoGroup.cpp.o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o CMakeFiles/rdchem.dir/Chirality.cpp.o  ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 ../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Built target rdchem
[ 97%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Mancude.cpp
In file included from /usr/include/c++/15/string:56,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/RDGeneral/Invariant.h:17,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/point.h:22,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolPickler.h:14,
                 from /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:34:
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘boost::python::api::object RDKit::addReactionToPNGStringHelper(const ChemicalReaction&, boost::python::api::object, bool, bool, bool, bool)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:499:54:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘boost::python::api::object RDKit::addReactionToPNGStringHelper(const ChemicalReaction&, boost::python::api::object, bool, bool, bool, bool)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:499:54: note: ‘<anonymous>’ declared here
  499 |   std::string cstr = python::extract<std::string>(png);
      |                                                      ^
[ 97%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SearchResults.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDKIT_SYNTHONSPACESEARCH_BUILD -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/SynthonSpaceSearch.dir/SearchResults.cpp.o -MF CMakeFiles/SynthonSpaceSearch.dir/SearchResults.cpp.o.d -o CMakeFiles/SynthonSpaceSearch.dir/SearchResults.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SearchResults.cpp
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘boost::python::api::object RDKit::addReactionToPNGFileHelper(const ChemicalReaction&, boost::python::api::object, bool, bool, bool, bool)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:512:56:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘boost::python::api::object RDKit::addReactionToPNGFileHelper(const ChemicalReaction&, boost::python::api::object, bool, bool, bool, bool)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:512:56: note: ‘<anonymous>’ declared here
  512 |   std::string cstr = python::extract<std::string>(fname);
      |                                                        ^
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘std::string RDKit::pyObjectToString(boost::python::api::object)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:74:15:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&ex + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘std::string RDKit::pyObjectToString(boost::python::api::object)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:72:32: note: ‘ex’ declared here
   72 |   python::extract<std::string> ex(input);
      |                                ^~
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = wchar_t; _Traits = std::char_traits<wchar_t>; _Alloc = std::allocator<wchar_t>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = wchar_t; _Traits = std::char_traits<wchar_t>; _Alloc = std::allocator<wchar_t>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = wchar_t; _Traits = std::char_traits<wchar_t>; _Alloc = std::allocator<wchar_t>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘std::string RDKit::pyObjectToString(boost::python::api::object)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:76:56:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> > >,boost::python::extract<std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> > >::storage)).std::__cxx11::basic_string<wchar_t>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘std::string RDKit::pyObjectToString(boost::python::api::object)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:76:56: note: ‘<anonymous>’ declared here
   76 |   std::wstring ws = python::extract<std::wstring>(input);
      |                                                        ^
make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake "--color=" rdRGroupDecomposition
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Digraph.cpp
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[ 97%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Sort.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Sort.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Sort.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Sort.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/Sort.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SubstructLibrary.dir/link.d -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o  ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 /usr/lib/x86_64-linux-gnu/libz.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Built target SubstructLibrary
[ 97%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/Configuration.cpp
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake "--color=" substructLibraryTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -MF CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o.d -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 97%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/Sp2Bond.cpp
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/DependInfo.cmake "--color=" substructLibraryCatchTest
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/catch_tests.cpp
[ 97%] Linking CXX executable gaExample
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaExample.dir/link.txt --verbose=1
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘boost::python::api::object RDKit::PreprocessReaction(ChemicalReaction&, boost::python::dict, std::string)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:447:59:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘boost::python::api::object RDKit::PreprocessReaction(ChemicalReaction&, boost::python::dict, std::string)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:447:59: note: ‘<anonymous>’ declared here
  447 |       std::string k = python::extract<std::string>(item[0]);
      |                                                           ^
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/gaExample.dir/link.d CMakeFiles/gaExample.dir/GaExample.cpp.o -o gaExample  ../../../lib/libRDKitRGroupDecomposition.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.90.0 ../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../lib/libRDKitga.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Built target gaExample
[ 97%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp
In member function ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:1176:20,
    inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string(const std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]’ at /usr/include/c++/15/bits/basic_string.h:617:20,
    inlined from ‘boost::python::api::object RDKit::AddRecursiveQueriesToReaction(ChemicalReaction&, boost::python::dict, std::string, bool)’ at /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:405:57:
/usr/include/c++/15/bits/basic_string.h:1165:19: warning: ‘*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&<unnamed> + offsetof(boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >,boost::python::extract<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::extract_rvalue<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::m_data.boost::python::converter::rvalue_from_python_data<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::<unnamed>.boost::python::converter::rvalue_from_python_storage<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::storage)).std::__cxx11::basic_string<char>::_M_string_length’ may be used uninitialized [-Wmaybe-uninitialized]
 1165 |         size_type __sz = _M_string_length;
      |                   ^~~~
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function ‘boost::python::api::object RDKit::AddRecursiveQueriesToReaction(ChemicalReaction&, boost::python::dict, std::string, bool)’:
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:405:57: note: ‘<anonymous>’ declared here
  405 |     std::string k = python::extract<std::string>(item[0]);
      |                                                         ^
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake "--color=" rdSubstructLibrary
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 97%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -MF CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o.d -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/AtropisomerBond.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/AtropisomerBond.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/AtropisomerBond.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/AtropisomerBond.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/configs/AtropisomerBond.cpp
[ 98%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -MF CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o.d -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule1a.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule1b.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule2.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule3.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule4a.cpp
[ 98%] Linking CXX shared library ../../../lib/libRDKitSynthonSpaceSearch.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/SynthonSpaceSearch.dir/link.txt --verbose=1
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule4b.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule4c.cpp
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/SynthonSpaceSearch.dir/link.d -Wl,-soname,libRDKitSynthonSpaceSearch.so.1 -o ../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearch_details.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpace.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSet.cpp.o CMakeFiles/SynthonSpaceSearch.dir/Synthon.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSearcher.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceSubstructureSearcher.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceFingerprintSearcher.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceRascalSearcher.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SynthonSpaceHitSet.cpp.o CMakeFiles/SynthonSpaceSearch.dir/SearchResults.cpp.o CMakeFiles/SynthonSpaceSearch.dir/MemoryMappedFileReader.cpp.o  ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 ../../../lib/libRDKitSynthonSpaceSearch.so.1 ../../../lib/libRDKitSynthonSpaceSearch.so
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Built target SynthonSpaceSearch
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/DependInfo.cmake "--color=" testSynthonSpaceSubstructureSearch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o -MF CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o.d -o CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/substructure_search_catch_tests.cpp
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/DependInfo.cmake "--color=" testSynthonSpaceFingerprintSearch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/fingerprint_search_catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceFingerprintSearch.dir/fingerprint_search_catch_tests.cpp.o -MF CMakeFiles/testSynthonSpaceFingerprintSearch.dir/fingerprint_search_catch_tests.cpp.o.d -o CMakeFiles/testSynthonSpaceFingerprintSearch.dir/fingerprint_search_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/fingerprint_search_catch_tests.cpp
[ 98%] Linking CXX executable rgroupCatchTests
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/rgroupCatchTests.dir/link.txt --verbose=1
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/DependInfo.cmake "--color=" testSynthonSpaceRascalSearch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Building CXX object Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/rascal_search_catch_tests.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/SynthonSpaceSearch/CMakeFiles/testSynthonSpaceRascalSearch.dir/rascal_search_catch_tests.cpp.o -MF CMakeFiles/testSynthonSpaceRascalSearch.dir/rascal_search_catch_tests.cpp.o.d -o CMakeFiles/testSynthonSpaceRascalSearch.dir/rascal_search_catch_tests.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/rascal_search_catch_tests.cpp
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rgroupCatchTests.dir/link.d CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -o rgroupCatchTests  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitRGroupDecomposition.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../lib/libRDKitga.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Built target rgroupCatchTests
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule5.cpp
make  -f Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/depend
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/Wrap /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/DependInfo.cmake "--color=" rdSynthonSpaceSearch
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make  -f Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/build.make Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/build
make[4]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 98%] Building CXX object Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/rdSynthonSpaceSearch.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/Wrap && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_CONTAINER_DYN_LINK -DBOOST_CONTAINER_NO_LIB -DBOOST_GRAPH_DYN_LINK -DBOOST_GRAPH_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_NUMPY_DYN_LINK -DBOOST_NUMPY_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSynthonSpaceSearch_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -isystem /usr/include/python3.14 -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -fPIC -MD -MT Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeFiles/rdSynthonSpaceSearch.dir/rdSynthonSpaceSearch.cpp.o -MF CMakeFiles/rdSynthonSpaceSearch.dir/rdSynthonSpaceSearch.cpp.o.d -o CMakeFiles/rdSynthonSpaceSearch.dir/rdSynthonSpaceSearch.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/Wrap/rdSynthonSpaceSearch.cpp
[ 98%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule5New.cpp
[ 99%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/Rule6.cpp
[ 99%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/x86_64-linux-gnu-g++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_64BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_BUILD_XYZ2MOL_SUPPORT -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++20 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/rules/SequenceRule.cpp
[ 99%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdChemReactions.dir/link.d  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o  ../../../../lib/libRDKitMarvinParser.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target rdChemReactions
[ 99%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdRGroupDecomposition.dir/link.d  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o  ../../../../lib/libRDKitRGroupDecomposition.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../../lib/libRDKitga.so.1.2026.03.4 ../../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target rdRGroupDecomposition
[ 99%] Linking CXX executable substructLibraryCatchTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryCatchTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/substructLibraryCatchTest.dir/link.d CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -o substructLibraryCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target substructLibraryCatchTest
[ 99%] Linking CXX executable testCIPLabeler
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/CIPLabeler && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCIPLabeler.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testCIPLabeler.dir/link.d CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o CMakeFiles/testCIPLabeler.dir/Node.cpp.o CMakeFiles/testCIPLabeler.dir/Edge.cpp.o CMakeFiles/testCIPLabeler.dir/Sort.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o CMakeFiles/testCIPLabeler.dir/configs/AtropisomerBond.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -o testCIPLabeler  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMarvinParser.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 -ldl /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target testCIPLabeler
[ 99%] Linking CXX executable substructLibraryTest
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/substructLibraryTest.dir/link.d CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -o substructLibraryTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target substructLibraryTest
[ 99%] Linking CXX executable testRGroupDecomp
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testRGroupDecomp.dir/link.d CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -o testRGroupDecomp  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitRGroupDecomposition.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitFMCS.so.1.2026.03.4 ../../../lib/libRDKitga.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[ 99%] Built target testRGroupDecomp
[100%] Linking CXX executable testSynthonSpaceRascalSearch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSynthonSpaceRascalSearch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSynthonSpaceRascalSearch.dir/link.d CMakeFiles/testSynthonSpaceRascalSearch.dir/rascal_search_catch_tests.cpp.o -o testSynthonSpaceRascalSearch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 ../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[100%] Built target testSynthonSpaceRascalSearch
[100%] Linking CXX executable testSynthonSpaceFingerprintSearch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSynthonSpaceFingerprintSearch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSynthonSpaceFingerprintSearch.dir/link.d CMakeFiles/testSynthonSpaceFingerprintSearch.dir/fingerprint_search_catch_tests.cpp.o -o testSynthonSpaceFingerprintSearch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 ../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[100%] Built target testSynthonSpaceFingerprintSearch
[100%] Linking CXX executable testSynthonSpaceSubstructureSearch
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSynthonSpaceSubstructureSearch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o: in function `CATCH2_INTERNAL_TEST_22()':
./obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/./Code/GraphMol/SynthonSpaceSearch/substructure_search_catch_tests.cpp:382:(.text+0x14b3): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
/usr/bin/x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/testSynthonSpaceSubstructureSearch.dir/link.d CMakeFiles/testSynthonSpaceSubstructureSearch.dir/substructure_search_catch_tests.cpp.o -o testSynthonSpaceSubstructureSearch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 ../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 /usr/lib/libCatch2.a ../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[100%] Built target testSynthonSpaceSubstructureSearch
[100%] Linking CXX shared module ../../../../rdkit/Chem/rdSynthonSpaceSearch.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SynthonSpaceSearch/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSynthonSpaceSearch.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdSynthonSpaceSearch.dir/link.d  -o ../../../../rdkit/Chem/rdSynthonSpaceSearch.so CMakeFiles/rdSynthonSpaceSearch.dir/rdSynthonSpaceSearch.cpp.o  ../../../../lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitRascalMCES.so.1.2026.03.4 ../../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitDescriptors.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[100%] Built target rdSynthonSpaceSearch
[100%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-z,relro -Wl,-z,now -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2 -Wl,--dependency-file=CMakeFiles/rdSubstructLibrary.dir/link.d  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o  ../../../../lib/libRDKitSubstructLibrary.so.1.2026.03.4 ../../../../lib/libRDKitRDBoost.so.1.2026.03.4 ../../../../lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4 ../../../../lib/libRDKitMolEnumerator.so.1.2026.03.4 ../../../../lib/libRDKitTautomerQuery.so.1.2026.03.4 ../../../../lib/libRDKitMolStandardize.so.1.2026.03.4 ../../../../lib/libRDKitChemReactions.so.1.2026.03.4 ../../../../lib/libRDKitFileParsers.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libmaeparser.so.1.3.3 /usr/lib/x86_64-linux-gnu/libz.so ../../../../lib/libRDKitFilterCatalog.so.1.2026.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2026.03.4 ../../../../lib/libRDKitDepictor.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libcoordgen.so.3.0.2 ../../../../lib/libRDKitMolAlign.so.1.2026.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2026.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2026.03.4 ../../../../lib/libRDKitAlignment.so.1.2026.03.4 ../../../../lib/libRDKitFingerprints.so.1.2026.03.4 ../../../../lib/libRDKitCIPLabeler.so.1.2026.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2026.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2026.03.4 ../../../../lib/libRDKitGenericGroups.so.1.2026.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2026.03.4 ../../../../lib/libRDKitGraphMol.so.1.2026.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2026.03.4 ../../../../lib/libRDKitCatalogs.so.1.2026.03.4 ../../../../lib/libRDKitDataStructs.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_numpy314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_python314.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_container.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_graph.so.1.90.0 ../../../../lib/libRDKitRDGeneral.so.1.2026.03.4 /usr/lib/x86_64-linux-gnu/libboost_serialization.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_random.so.1.90.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.90.0 -ldl
make[4]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
[100%] Built target rdSubstructLibrary
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/usr/bin/cmake -E cmake_progress_start /build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu/CMakeFiles 0
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-10 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-10 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-10 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-10/CMakeFiles/rdkit.dir/DependInfo.cmake "--color=" rdkit
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
[ 14%] Building C object CMakeFiles/rdkit.dir/bfp_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
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[ 78%] Building C object CMakeFiles/rdkit.dir/rdkit_io.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/10/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolHash: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFileParsers: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFingerprints: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubgraphs: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubstructMatch: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGraphMol: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lEigenSolvers: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDataStructs: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDepictor: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lRDGeometryLib: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lrdkit_base: No such file or directory
collect2: error: ld returned 1 exit status
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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/usr/bin/cmake -S/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit -B/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11 --check-build-system CMakeFiles/Makefile.cmake 0
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cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11 /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-11/CMakeFiles/rdkit.dir/DependInfo.cmake "--color=" rdkit
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
[ 28%] Building C object CMakeFiles/rdkit.dir/guc.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
[ 35%] Building C object CMakeFiles/rdkit.dir/low_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
[ 42%] Building C object CMakeFiles/rdkit.dir/mol_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
[ 57%] Building C object CMakeFiles/rdkit.dir/bfp_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gin.c.o -MF CMakeFiles/rdkit.dir/bfp_gin.c.o.d -o CMakeFiles/rdkit.dir/bfp_gin.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gin.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bitstring.c.o -MF CMakeFiles/rdkit.dir/bitstring.c.o.d -o CMakeFiles/rdkit.dir/bitstring.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bitstring.c
[ 78%] Building C object CMakeFiles/rdkit.dir/rdkit_io.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/11/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
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/usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolDraw2D: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolHash: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSmilesParse: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubstructMatch: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGraphMol: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lEigenSolvers: No such file or directory
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/12/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/13/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/13/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
[ 28%] Building C object CMakeFiles/rdkit.dir/guc.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/13/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/13/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/13/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
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/usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
[ 14%] Building C object CMakeFiles/rdkit.dir/bfp_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
[ 28%] Building C object CMakeFiles/rdkit.dir/guc.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
[ 35%] Building C object CMakeFiles/rdkit.dir/low_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
[ 42%] Building C object CMakeFiles/rdkit.dir/mol_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
[ 50%] Building C object CMakeFiles/rdkit.dir/rdkit_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
[ 57%] Building C object CMakeFiles/rdkit.dir/bfp_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/14/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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[ 14%] Building C object CMakeFiles/rdkit.dir/bfp_op.c.o
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[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
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[ 35%] Building C object CMakeFiles/rdkit.dir/low_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
[ 42%] Building C object CMakeFiles/rdkit.dir/mol_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
[ 50%] Building C object CMakeFiles/rdkit.dir/rdkit_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
[ 57%] Building C object CMakeFiles/rdkit.dir/bfp_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
[ 64%] Building C object CMakeFiles/rdkit.dir/bfp_gin.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gin.c.o -MF CMakeFiles/rdkit.dir/bfp_gin.c.o.d -o CMakeFiles/rdkit.dir/bfp_gin.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gin.c
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[ 78%] Building C object CMakeFiles/rdkit.dir/rdkit_io.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
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[ 92%] Building C object CMakeFiles/rdkit.dir/sfp_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/15/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
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/usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolEnumerator: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lTautomerQuery: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolDraw2D: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolTransforms: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolHash: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFMCS: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lChemReactions: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lChemTransforms: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFileParsers: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSmilesParse: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFingerprints: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubgraphs: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lPartialCharges: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubstructMatch: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGraphMol: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lEigenSolvers: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDataStructs: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDepictor: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lrdkit_base: No such file or directory
collect2: error: ld returned 1 exit status
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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/usr/bin/cmake -S/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit -B/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-16 --check-build-system CMakeFiles/Makefile.cmake 0
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
[ 14%] Building C object CMakeFiles/rdkit.dir/bfp_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
[ 28%] Building C object CMakeFiles/rdkit.dir/guc.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
[ 35%] Building C object CMakeFiles/rdkit.dir/low_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
[ 42%] Building C object CMakeFiles/rdkit.dir/mol_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
[ 50%] Building C object CMakeFiles/rdkit.dir/rdkit_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
[ 57%] Building C object CMakeFiles/rdkit.dir/bfp_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
[ 64%] Building C object CMakeFiles/rdkit.dir/bfp_gin.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gin.c.o -MF CMakeFiles/rdkit.dir/bfp_gin.c.o.d -o CMakeFiles/rdkit.dir/bfp_gin.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gin.c
[ 71%] Building C object CMakeFiles/rdkit.dir/bitstring.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bitstring.c.o -MF CMakeFiles/rdkit.dir/bitstring.c.o.d -o CMakeFiles/rdkit.dir/bitstring.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bitstring.c
[ 78%] Building C object CMakeFiles/rdkit.dir/rdkit_io.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
[ 85%] Building C object CMakeFiles/rdkit.dir/rxn_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rxn_op.c.o -MF CMakeFiles/rdkit.dir/rxn_op.c.o.d -o CMakeFiles/rdkit.dir/rxn_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rxn_op.c
[ 92%] Building C object CMakeFiles/rdkit.dir/sfp_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/16/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/sfp_op.c.o -MF CMakeFiles/rdkit.dir/sfp_op.c.o.d -o CMakeFiles/rdkit.dir/sfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/sfp_op.c
[100%] Linking CXX shared library librdkit.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolEnumerator: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lTautomerQuery: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolDraw2D: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolTransforms: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolHash: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFMCS: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lChemReactions: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lChemTransforms: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFileParsers: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSmilesParse: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lFingerprints: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubgraphs: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDescriptors: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lPartialCharges: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lSubstructMatch: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGraphMol: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lEigenSolvers: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDataStructs: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lDepictor: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lRDGeometryLib: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lRDGeneral: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lrdkit_base: No such file or directory
collect2: error: ld returned 1 exit status
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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/usr/bin/cmake -S/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit -B/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/build-17 --check-build-system CMakeFiles/Makefile.cmake 0
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[  7%] Building CXX object CMakeFiles/rdkit.dir/adapter.cpp.o
/usr/bin/c++ -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -fPIC -MD -MT CMakeFiles/rdkit.dir/adapter.cpp.o -MF CMakeFiles/rdkit.dir/adapter.cpp.o.d -o CMakeFiles/rdkit.dir/adapter.cpp.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/adapter.cpp
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_op.c.o -MF CMakeFiles/rdkit.dir/bfp_op.c.o.d -o CMakeFiles/rdkit.dir/bfp_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_op.c
[ 21%] Building C object CMakeFiles/rdkit.dir/cache.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/cache.c.o -MF CMakeFiles/rdkit.dir/cache.c.o.d -o CMakeFiles/rdkit.dir/cache.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/cache.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/guc.c.o -MF CMakeFiles/rdkit.dir/guc.c.o.d -o CMakeFiles/rdkit.dir/guc.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/guc.c
[ 35%] Building C object CMakeFiles/rdkit.dir/low_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/low_gist.c.o -MF CMakeFiles/rdkit.dir/low_gist.c.o.d -o CMakeFiles/rdkit.dir/low_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/low_gist.c
[ 42%] Building C object CMakeFiles/rdkit.dir/mol_op.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/mol_op.c.o -MF CMakeFiles/rdkit.dir/mol_op.c.o.d -o CMakeFiles/rdkit.dir/mol_op.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/mol_op.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_gist.c.o -MF CMakeFiles/rdkit.dir/rdkit_gist.c.o.d -o CMakeFiles/rdkit.dir/rdkit_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_gist.c
[ 57%] Building C object CMakeFiles/rdkit.dir/bfp_gist.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gist.c.o -MF CMakeFiles/rdkit.dir/bfp_gist.c.o.d -o CMakeFiles/rdkit.dir/bfp_gist.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gist.c
[ 64%] Building C object CMakeFiles/rdkit.dir/bfp_gin.c.o
/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/bfp_gin.c.o -MF CMakeFiles/rdkit.dir/bfp_gin.c.o.d -o CMakeFiles/rdkit.dir/bfp_gin.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/bfp_gin.c
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/usr/bin/cc -DRDKITVER=\"007700\" -DRDK_TOOLKIT_VERSION=\"\" -Drdkit_EXPORTS -I/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/../../../Code -I/usr/include/postgresql -I/usr/include/postgresql/17/server -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -fPIC -MD -MT CMakeFiles/rdkit.dir/rdkit_io.c.o -MF CMakeFiles/rdkit.dir/rdkit_io.c.o.d -o CMakeFiles/rdkit.dir/rdkit_io.c.o -c /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/PgSQL/rdkit/rdkit_io.c
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/usr/bin/cmake -E cmake_link_script CMakeFiles/rdkit.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGeneralizedSubstruct: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lTautomerQuery: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lMolDraw2D: No such file or directory
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/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lGraphMol: No such file or directory
/usr/bin/x86_64-linux-gnu-ld.bfd: cannot find -lEigenSolvers: No such file or directory
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/rdkit-binaries-forky-amd64/rdkit-202603.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/rdkit.dir/link.d -Wl,-soname,librdkit.so -o librdkit.so CMakeFiles/rdkit.dir/adapter.cpp.o CMakeFiles/rdkit.dir/bfp_op.c.o CMakeFiles/rdkit.dir/cache.c.o CMakeFiles/rdkit.dir/guc.c.o CMakeFiles/rdkit.dir/low_gist.c.o CMakeFiles/rdkit.dir/mol_op.c.o CMakeFiles/rdkit.dir/rdkit_gist.c.o CMakeFiles/rdkit.dir/bfp_gist.c.o CMakeFiles/rdkit.dir/bfp_gin.c.o CMakeFiles/rdkit.dir/bitstring.c.o CMakeFiles/rdkit.dir/rdkit_io.c.o CMakeFiles/rdkit.dir/rxn_op.c.o CMakeFiles/rdkit.dir/sfp_op.c.o  /usr/lib/x86_64-linux-gnu/libpq.so -lGeneralizedSubstruct -lMolEnumerator -lTautomerQuery -lMolDraw2D -lMolTransforms -lMolHash -lFMCS -lChemReactions -lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs -lDescriptors -lPartialCharges -lSubstructMatch -lGraphMol -lEigenSolvers -lDataStructs -lDepictor -lRDGeometryLib -lRDGeneral -lrdkit_base
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatGenerator.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragCatParams.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FragCatalog/FragFPGenerator.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/GaussianShape.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeInput.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeInput.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeOverlayOptions.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/SingleConformerAlignment.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GenericGroups/GenericGroups.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GraphMol.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinDefs.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/AlignMolecules.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolBundle.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolBundle.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalog.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
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Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:233: warning: unbalanced grouping commands
-202603.4/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
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Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/AtomSymbol.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawAnnotation.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMol.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCH.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHCircleAndLine.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHLasso.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawShape.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextCairo.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextCairo.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFT.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTCairo.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTJS.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTJS.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTSVG.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextFTSVG.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextJS.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextJS.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextNotFT.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextNotFT.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextSVG.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawTextSVG.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Fonts/roboto_regular.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Fonts/roboto_regular.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Fonts/telex_regular.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DJS.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Qt/DrawTextFTQt.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Qt/DrawTextQt.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Qt/DrawTextQt.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Qt/MolDraw2DQt.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/Qt/MolDraw2DQt.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/StringRect.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/LinkNode.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/mf.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/MolHash.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolHash/nmmolhash.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/details.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h...
Parsing file /build/rdkit-bina/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:514: warning: unbalanced grouping commands
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:805: warning: unbalanced grouping commands
ries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolPickler.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolPickler.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolProcessing/MolProcessing.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolProcessing/MolProcessing.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Pipeline.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Pipeline.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Validate.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolTransforms/MolTransforms.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MonomerInfo.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/new_canon.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/GasteigerCharges.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/PartialCharges/GasteigerParams.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryAtom.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryOps.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/PartitionSet.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RascalMCES/RascalClusterOptions.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RDKitQueries.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupFingerprintScore.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RGroupDecomposition/RGroupUtils.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/RingInfo.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ROMol.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Graph/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ROMol.h:588: warning: unbalanced grouping commands
Mol/ROMol.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SanitException.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/CanonicalizeStereoGroups.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/StereoGroup.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstructLibrary/PatternFactory.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/MemoryMappedFileReader.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceRascalSearcher.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSearch_details.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSearcher.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpaceSubstructureSearcher.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/TautomerQuery/TautomerQuery.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Trajectory/Snapshot.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs/Catalog.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs/CatalogEntry.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs/CatalogParams.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Catalogs/CatalogParams.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/base64.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitOps.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVect.h...
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Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVects.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVects.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVectUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/BitVectUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DataStructs/DatastructsException.h...
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Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Params.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Params.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Utils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Utils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Conrec.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Conrec.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Matrix.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Matrix.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/BFGSOpt_SVE.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Optimizer/BFGSOpt_SVE.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/SquareMatrix.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/SquareMatrix.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/SymmMatrix.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/SymmMatrix.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Vector.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Numerics/Vector.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Grid3D.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Grid3D.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/GridUtils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/GridUtils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/point.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/point.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform2D.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform2D.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform3D.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Transform3D.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformGrid3D.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformGrid3D.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformRealValueGrid3D.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/UniformRealValueGrid3D.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Utils.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Geometry/Utils.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Features/Feature.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/Features/Feature.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building macro definition list...
Building group list...
Building directo/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/DCLV.h:67: warning: documented symbol 'uses default vdw RDKit::Descriptors::DoubleCubicLatticeVolume::radii' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:63: warning: documented symbol 'for experimental torsion angle RDKit::DGeomHelpers::preferences' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeOverlayOptions.h:22: warning: documented symbol 'enum RDKIT_GAUSSIANSHAPE_EXPORT RDKit::GaussianShape::StartMode' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/ShapeOverlayOptions.h:39: warning: documented symbol 'enum RDKIT_GAUSSIANSHAPE_EXPORT RDKit::GaussianShape::OptimMode' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1255: warning: documented symbol 'modifies molecule in RDKit::MolOps::place' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1271: warning: documented symbol 'modifies molecule in RDKit::MolOps::place' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolStandardize/Pipeline.h:90: warning: documented symbol 'enum RDKIT_MOLSTANDARDIZE_EXPORT RDKit::MolStandardize::PipelineStatus' was not declared or defined.
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryOps.h:572: warning: Found unknown command '\overloadquery'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:80: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:135: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:209: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:84: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:139: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:213: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/QueryOps.h:563: warning: Found unknown command '\overloadquery'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:77: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:132: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:206: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:87: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:142: warning: Found unknown command '\override'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:216: warning: Found unknown command '\override'
ry list...
Building namespace list...
Building file list...
Building class list...
Building concept list...
Computing nesting relations for classes...
Associating documentation with classes...
Associating documentation with concepts...
Associating documentation with modules...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Warn for undocumented namespaces...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Computing module relations...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file Catalog.h...
Generating code for file CatalogEntry.h...
Generating code for file CatalogParams.h...
Generating code for file ChemicalFeature.h...
Generating code for file FreeChemicalFeature.h...
Generating code for file MetricFuncs.h...
Generating code for file MetricMatrixCalc.h...
Generating code for file base64.h...
Generating code for file BitOps.h...
Generating code for file BitVect.h...
Generating code for file BitVects.h...
Generating code for file BitVectUtils.h...
Generating code for file DatastructsException.h...
Generating code for file DatastructsStreamOps.h...
Generating code for file DiscreteDistMat.h...
Generating code for file DiscreteValueVect.h...
Generating code for file ExplicitBitVect.h...
Generating code for file FPBReader.h...
Generating code for file MultiFPBReader.h...
Generating code for file RealValueVect.h...
Generating code for file SparseBitVect.h...
Generating code for file SparseIntVect.h...
Generating code for file BoundsMatrix.h...
Generating code for file ChiralSet.h...
Generating code for file ChiralViolationContribs.h...
Generating code for file DistGeomUtils.h...
Generating code for file DistViolationContribs.h...
Generating code for file FourthDimContribs.h...
Generating code for file TriangleSmooth.h...
Generating code for file Feature.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraints.h...
Generating code for file Contrib.h...
Generating code for file DistanceConstraints.h...
Generating code for file FiniteDifference.h...
Generating code for file ForceField.h...
Generating code for file OopBend.h...
Generating code for file StretchBend.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionConstraint.h...
Generating code for file AngleBend.h...
Generating code for file AngleBend.h...
Generating code for file BondStretch.h...
Generating code for file BondStretch.h...
Generating code for file Contribs.h...
Generating code for file Contribs.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistanceConstraint.h...
Generating code for file Inversion.h...
Generating code for file Inversions.h...
Generating code for file Nonbonded.h...
Generating code for file Nonbonded.h...
Generating code for file Params.h...
Generating code for file Params.h...
Generating code for file PositionConstraint.h...
Generating code for file PositionConstraint.h...
Generating code for file PositionConstraint.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngle.h...
Generating code for file Utils.h...
Generating code for file Utils.h...
Generating code for file Grid3D.h...
Generating code for file GridUtils.h...
Generating code for file point.h...
Generating code for file Transform.h...
Generating code for file Transform2D.h...
Generating code for file Transform3D.h...
Generating code for file UniformGrid3D.h...
Generating code for file UniformRealValueGrid3D.h...
Generating code for file Abbreviations.h...
Generating code for file Atom.h...
Generating code for file atomic_data.h...
Generating code for file AtomIterators.h...
Generating code for file Atropisomers.h...
Generating code for file Bond.h...
Generating code for file BondIterators.h...
Generating code for file Canon.h...
Generating code for file CartesianProduct.h...
Generating code for file Enumerate.h...
Generating code for file EnumerateBase.h...
Generating code for file EnumerateTypes.h...
Generating code for file EnumerationPickler.h...
Generating code for file EnumerationStrategyBase.h...
Generating code for file EvenSamplePairs.h...
Generating code for file RandomSample.h...
Generating code for file RandomSampleAllBBs.h...
Generating code for file PreprocessRxn.h...
Generating code for file Reaction.h...
Generating code for file ReactionFingerprints.h...
Generating code for file ReactionParser.h...
Generating code for file ReactionPickler.h...
Generating code for file ReactionRunner.h...
Generating code for file ReactionUtils.h...
Generating code for file SanitizeRxn.h...
Generating code for file ChemTransforms.h...
Generating code for file MolFragmenter.h...
Generating code for file MolFragmenterJSONParser.h...
Generating code for file Chirality.h...
Generating code for file CIPLabeler.h...
Generating code for file CIPMol.h...
Generating code for file AtropisomerBond.h...
Generating code for file Configuration.h...
Generating code for file Sp2Bond.h...
Generating code for file Tetrahedral.h...
Generating code for file Descriptor.h...
Generating code for file Digraph.h...
Generating code for file Edge.h...
Generating code for file Mancude.h...
Generating code for file Node.h...
Generating code for file Priority.h...
Generating code for file Pairlist.h...
Generating code for file Rule1a.h...
Generating code for file Rule1b.h...
Generating code for file Rule2.h...
Generating code for file Rule3.h...
Generating code for file Rule4a.h...
Generating code for file Rule4b.h...
Generating code for file Rule4c.h...
Generating code for file Rule5.h...
Generating code for file Rule5New.h...
Generating code for file Rule6.h...
Generating code for file Rules.h...
Generating code for file SequenceRule.h...
Generating code for file Sort.h...
Generating code for file TooManyNodesException.h...
Generating code for file Conformer.h...
Generating code for file DepictUtils.h...
Generating code for file EmbeddedFrag.h...
Generating code for file RDDepictor.h...
Generating code for file Templates.h...
Generating code for file TemplateSmarts.h...
Generating code for file Deprotect.h...
Generating code for file AtomFeat.h...
Generating code for file AUTOCORR2D.h...
Generating code for file AUTOCORR3D.h...
Generating code for file BCUT.h...
Generating code for file ConnectivityDescriptors.h...
Generating code for file CoulombMat.h...
Generating code for file Crippen.h...
Generating code for file Data3Ddescriptors.h...
Generating code for file DCLV.h...
Generating code for file DCLV_dots.h...
Generating code for file EEM.h...
Generating code for file GETAWAY.h...
Generating code for file Lipinski.h...
Generating code for file MolData3Ddescriptors.h...
Generating code for file MolDescriptors.h...
Generating code for file MolDescriptors3D.h...
Generating code for file MolSurf.h...
Generating code for file MORSE.h...
Generating code for file MQN.h...
Generating code for file OxidationNumbers.h...
Generating code for file PBF.h...
Generating code for file PMI.h...
Generating code for file Property.h...
Generating code for file RDF.h...
Generating code for file RegisterDescriptor.h...
Generating code for file USRDescriptor.h...
Generating code for file WHIM.h...
Generating code for file details.h...
Generating code for file details.h...
Generating code for file DetermineBonds.h...
Generating code for file BoundsMatrixBuilder.h...
Generating code for file Embedder.h...
Generating code for file EnumerateStereoisomers.h...
Generating code for file Flippers.h...
Generating code for file CDXMLParser.h...
Generating code for file FileParsers.h...
Generating code for file FileParserUtils.h...
Generating code for file FileWriters.h...
Generating code for file GeneralFileReader.h...
Generating code for file MaestroProperties.h...
Generating code for file MolFileStereochem.h...
Generating code for file MolSGroupParsing.h...
Generating code for file MolSGroupWriting.h...
Generating code for file MolSupplier.h...
Generating code for file MolSupplier.v1API.h...
Generating code for file MolWriters.h...
Generating code for file MultithreadedMolSupplier.h...
Generating code for file MultithreadedSDMolSupplier.h...
Generating code for file MultithreadedSmilesMolSupplier.h...
Generating code for file PNGParser.h...
Generating code for file ProximityBonds.h...
Generating code for file SequenceParsers.h...
Generating code for file SequenceWriters.h...
Generating code for file FilterCatalog.h...
Generating code for file FilterCatalogEntry.h...
Generating code for file FilterMatcherBase.h...
Generating code for file FilterMatchers.h...
Generating code for file Filters.h...
Generating code for file FunctionalGroupHierarchy.h...
Generating code for file AtomPairGenerator.h...
Generating code for file AtomPairs.h...
Generating code for file FingerprintGenerator.h...
Generating code for file Fingerprints.h...
Generating code for file FingerprintUtil.h...
Generating code for file MACCS.h...
Generating code for file MHFP.h...
Generating code for file MorganFingerprints.h...
Generating code for file MorganGenerator.h...
Generating code for file RDKitFPGenerator.h...
Generating code for file TopologicalTorsionGenerator.h...
Generating code for file Composition2N.h...
Generating code for file DebugTrace.h...
Generating code for file DuplicatedSeedCache.h...
Generating code for file FMCS.h...
Generating code for file Graph.h...
Generating code for file MatchTable.h...
Generating code for file MaximumCommonSubgraph.h...
Generating code for file Seed.h...
Generating code for file SeedSet.h...
Generating code for file SubstructMatchCustom.h...
Generating code for file SubstructureCache.h...
Generating code for file Target.h...
Generating code for file TargetMatch.h...
Generating code for file PlanarityContribs.h...
Generating code for file TorsionAngleContribs.h...
Generating code for file TorsionAngleM6.h...
Generating code for file TorsionPreferences.h...
Generating code for file FFConvenience.h...
Generating code for file MMFF.h...
Generating code for file AtomTyper.h...
Generating code for file AtomTyper.h...
Generating code for file Builder.h...
Generating code for file Builder.h...
Generating code for file UFF.h...
Generating code for file FragCatalogEntry.h...
Generating code for file FragCatalogUtils.h...
Generating code for file FragCatGenerator.h...
Generating code for file FragCatParams.h...
Generating code for file FragFPGenerator.h...
Generating code for file GaussianShape.h...
Generating code for file ShapeInput.h...
Generating code for file ShapeOverlayOptions.h...
Generating code for file SingleConformerAlignment.h...
Generating code for file XQMol.h...
Generating code for file GenericGroups.h...
Generating code for file GraphMol.h...
Generating code for file MarvinDefs.h...
Generating code for file MarvinParser.h...
Generating code for file MMPA.h...
Generating code for file AlignMolecules.h...
Generating code for file O3AAlignMolecules.h...
Generating code for file MolBundle.h...
Generating code for file MolCatalog.h...
Generating code for file MolCatalogEntry.h...
Generating code for file MolCatalogParams.h...
Generating code for file FeatureParser.h...
Generating code for file MolChemicalFeature.h...
Generating code for file MolChemicalFeatureDef.h...
Generating code for file MolChemicalFeatureFactory.h...
Generating code for file AtomSymbol.h...
Generating code for file DrawAnnotation.h...
Generating code for file DrawMol.h...
Generating code for file DrawMolMCH.h...
Generating code for file DrawMolMCHCircleAndLine.h...
Generating code for file DrawMolMCHLasso.h...
Generating code for file DrawShape.h...
Generating code for file DrawText.h...
Generating code for file DrawTextCairo.h...
Generating code for file DrawTextFT.h...
Generating code for file DrawTextFTCairo.h...
Generating code for file DrawTextFTJS.h...
Generating code for file DrawTextFTSVG.h...
Generating code for file DrawTextJS.h...
Generating code for file DrawTextNotFT.h...
Generating code for file DrawTextSVG.h...
Generating code for file roboto_regular.h...
Generating code for file telex_regular.h...
Generating code for file MolDraw2D.h...
Generating code for file MolDraw2DCairo.h...
Generating code for file MolDraw2DDetails.h...
Generating code for file MolDraw2DHelpers.h...
Generating code for file MolDraw2DJS.h...
Generating code for file MolDraw2DSVG.h...
Generating code for file MolDraw2DUtils.h...
Generating code for file MolDraw2Dwx.h...
Generating code for file DrawTextFTQt.h...
Generating code for file DrawTextQt.h...
Generating code for file MolDraw2DQt.h...
Generating code for file StringRect.h...
Generating code for file LinkNode.h...
Generating code for file MolEnumerator.h...
Generating code for file mf.h...
Generating code for file MolHash.h...
Generating code for file nmmolhash.h...
Generating code for file MIFDescriptors.h...
Generating code for file MolInterchange.h...
Generating code for file MolOps.h...
Generating code for file MolPickler.h...
Generating code for file MolProcessing.h...
Generating code for file AcidBaseCatalogEntry.h...
Generating code for file AcidBaseCatalogParams.h...
Generating code for file AcidBaseCatalogUtils.h...
Generating code for file Charge.h...
Generating code for file Fragment.h...
Generating code for file FragmentCatalogEntry.h...
Generating code for file FragmentCatalogParams.h...
Generating code for file FragmentCatalogUtils.h...
Generating code for file Metal.h...
Generating code for file MolStandardize.h...
Generating code for file Normalize.h...
Generating code for file Pipeline.h...
Generating code for file Tautomer.h...
Generating code for file Tautomer.h...
Generating code for file TautomerCatalogEntry.h...
Generating code for file TautomerCatalogParams.h...
Generating code for file TautomerCatalogUtils.h...
Generating code for file TransformCatalogEntry.h...
Generating code for file TransformCatalogParams.h...
Generating code for file TransformCatalogUtils.h...
Generating code for file Validate.h...
Generating code for file MolTransforms.h...
Generating code for file MonomerInfo.h...
Generating code for file new_canon.h...
Generating code for file GasteigerCharges.h...
Generating code for file GasteigerParams.h...
Generating code for file PeriodicTable.h...
Generating code for file QueryAtom.h...
Generating code for file QueryBond.h...
Generating code for file QueryOps.h...
Generating code for file PartitionSet.h...
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Generating docs for file RDAny.h/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/DistGeomUtils.h:254: warning: The following parameter of DistGeom::constructAllInOneForceField(const BoundsMatrix &mmat, RDGeom::PointPtrVect &positions, const ForceFields::CrystalFF::CrystalFFDetails &etkdgDetails, const VECT_CHIRALSET *csets, const std::map< std::pair< unsigned int, unsigned int >, double > *extraWeights=nullptr, const boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/DistGeomUtils.h:127: warning: The following parameter of DistGeom::constructForceField(const BoundsMatrix &mmat, const RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, const double weightChiral=1.0, const double weightFourthDim=0.1, const std::map< std::pair< int, int >, double > *extraWeights=nullptr, const double basinSizeTol=5.0, const boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/DistGeomUtils.h:93: warning: The following parameter of DistGeom::constructForceField(const BoundsMatrix &mmat, const RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, const double weightDistance=1.0, const double weightChiral=1.0, const double weightFourthDim=0.1, const std::map< std::pair< int, int >, double > *extraWeights=nullptr, const double basinSizeTol=5.0, const boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/ChiralViolationContribs.h:53: warning: argument 'cset' of command @param is not found in the argument list of DistGeom::ChiralViolationContribs::ChiralViolationContribs(ForceFields::ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/ChiralViolationContribs.h:53: warning: argument 'weight' of command @param is not found in the argument list of DistGeom::ChiralViolationContribs::ChiralViolationContribs(ForceFields::ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/FourthDimContribs.h:36: warning: argument 'idx' of command @param is not found in the argument list of DistGeom::FourthDimContribs::FourthDimContribs(ForceFields::ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/DistGeom/FourthDimContribs.h:36: warning: argument 'weight' of command @param is not found in the argument list of DistGeom::FourthDimContribs::FourthDimContribs(ForceFields::ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraint.h:24: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraint.h:24: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraint.h:24: warning: The following parameters of ForceFields::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
...
Generating docs for file RDConfig.h...
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Generating docs for compound ForceFields::AngleConstraintContrib...
Generating docs for compound ForceFields::AngleConstraintContribs/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:64: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, bool relative, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:64: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, bool relative, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:64: warning: The following parameters of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, bool relative, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:52: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:52: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/AngleConstraints.h:52: warning: The following parameters of ForceFields::AngleConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/DistanceConstraints.h:60: warning: argument 'forceConst' of command @param is not found in the argument list of ForceFields::DistanceConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, bool relative, double minLen, double maxLen, double forceConstant)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/DistanceConstraints.h:60: warning: The following parameter of ForceFields::DistanceConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, bool relative, double minLen, double maxLen, double forceConstant) is not documented:
  parameter 'forceConstant'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/DistanceConstraints.h:49: warning: argument 'forceConst' of command @param is not found in the argument list of ForceFields::DistanceConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, double minLen, double maxLen, double forceConstant)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/DistanceConstraints.h:49: warning: The following parameter of ForceFields::DistanceConstraintContribs::addContrib(unsigned int idx1, unsigned int idx2, double minLen, double maxLen, double forceConstant) is not documented:
  parameter 'forceConstant'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/ForceField.h:159: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/ForceField.h:159: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/ForceField.h:144: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/PositionConstraint.h:25: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/PlanarityContribs.h:49: warning: argument 'forceConst' of command @param is not found in the argument list of ForceFields::CrystalFF::PlanarityContribs::addContrib(std::size_t idx1, std::size_t idx2, std::size_t idx3, std::size_t idx4, double forceConstant=1.0)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ForceFieldHelpers/CrystalFF/PlanarityContribs.h:49: warning: The following parameter of ForceFields::CrystalFF::PlanarityContribs::addContrib(std::size_t idx1, std::size_t idx2, std::size_t idx3, std::size_t idx4, double forceConstant=1.0) is not documented:
  parameter 'forceConstant'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/AngleBend.h:28: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::addTerm(unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/AngleBend.h:28: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::addTerm(unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/BondStretch.h:27: warning: The following parameter of ForceFields::MMFF::BondStretchContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) is not documented:
  parameter 'mmffBondParams'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/Nonbonded.h:81: warning: argument 'idx1' of command @param is not found in the argument list of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/Nonbonded.h:81: warning: argument 'idx2' of command @param is not found in the argument list of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/OopBend.h:26: warning: The following parameter of ForceFields::MMFF::OopBendContrib::addTerm(unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFOop *mmffOopParams) is not documented:
  parameter 'mmffOopParams'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/StretchBend.h:33: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/StretchBend.h:33: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::addTerm(const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::addTerm(unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/MMFF/TorsionAngle.h:34: warning: The following parameter of ForceFields::MMFF::TorsionAngleContrib::addTerm(unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) is not documented:
  parameter 'mmffTorParams'
Params...
Generating docs for compound ForceFields::AngleConstraintContribs...
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Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs f/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Inversion.h:27: warning: The following parameter of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) is not documented:
  parameter 'oobForceScalingFactor'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Inversions.h:81: warning: argument 'pos' of command @param is not found in the argument list of ForceFields::UFF::InversionContribs::getEnergy(const RDGeom::Point3DPtrVect &positions, std::vector< double > &energies) const
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/ForceField/UFF/Inversions.h:81: warning: The following parameter of ForceFields::UFF::InversionContribs::getEnergy(const RDGeom::Point3DPtrVect &positions, std::vector< double > &energies) const is not documented:
  parameter 'positions'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/RDDepictor.h:393: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=nullptr, bool acceptFailure=false, bool forceRDKit=false)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Depictor/RDDepictor.h:393: warning: The following parameter of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=nullptr, bool acceptFailure=false, bool forceRDKit=false) is not documented:
  parameter 'referencePattern'
or compound ForceFields::UFF::BondStretchContrib...
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Generating docs for comp/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SubstanceGroup.h:282: warning: The following parameter of RDKit::addSubstanceGroup(ROMol &mol, SubstanceGroup sgroup) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SequenceParsers.h:105: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/SequenceParsers.h:105: warning: The following parameter of RDKit::HELMToMol(const char *helm, bool sanitize=true) is not documented:
  parameter 'helm'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Fingerprints.h:69: warning: The following parameter of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=nullptr, ExplicitBitVect *setOnlyBits=nullptr, bool branchedPaths=true, const std::vector< std::uint32_t > *fromAtoms=nullptr) is not documented:
  parameter 'fromAtoms'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmilesWrite.h:226: warning: argument 'doRandom' of command @param is not found in the argument list of RDKit::MolFragmentToSmiles(const ROMol &mol, const std::vector< int > &atomsToUse, const std::vector< int > *bondsToUse=nullptr, const std::vector< std::string > *atomSymbols=nullptr, const std::vector< std::string > *bondSymbols=nullptr, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:35: warning: argument 'MolWriterParams' of command @param is not found in the argument list of RDKit::MolToMolBlock(const ROMol &mol, const MolWriterParams &params, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:35: warning: The following parameter of RDKit::MolToMolBlock(const ROMol &mol, const MolWriterParams &params, int confId=-1) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:110: warning: argument 'MolWriterParams' of command @param is not found in the argument list of RDKit::MolToMolFile(const ROMol &mol, const std::string &fName, const MolWriterParams &params, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:110: warning: The following parameter of RDKit::MolToMolFile(const ROMol &mol, const std::string &fName, const MolWriterParams &params, int confId=-1) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinParser.h:179: warning: The following parameters of RDKit::MolToMrvBlock(const ROMol &mol, bool includeStereo=true, int confId=-1, bool kekulize=true, bool prettyPrint=false) are not documented:
  parameter 'mol'
  parameter 'includeStereo'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MarvinParse/MarvinParser.h:154: warning: The following parameters of RDKit::MolToMrvFile(const ROMol &mol, const std::string &fName, bool includeStereo=true, int confId=-1, bool kekulize=true, bool prettyPrint=false) are not documented:
  parameter 'mol'
  parameter 'fName'
  parameter 'includeStereo'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:226: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:226: warning: The following parameter of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) is not documented:
  parameter 'fname'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:96: warning: argument 'MolWriterParams' of command @param is not found in the argument list of RDKit::MolToV2KMolBlock(const ROMol &mol, const MolWriterParams &params=MolWriterParams(), int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:96: warning: The following parameter of RDKit::MolToV2KMolBlock(const ROMol &mol, const MolWriterParams &params=MolWriterParams(), int confId=-1) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:65: warning: argument 'MolWriterParams' of command @param is not found in the argument list of RDKit::MolToV3KMolBlock(const ROMol &mol, const MolWriterParams &params, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:65: warning: The following parameter of RDKit::MolToV3KMolBlock(const ROMol &mol, const MolWriterParams &params, int confId=-1) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:141: warning: argument 'MolWriterParams' of command @param is not found in the argument list of RDKit::MolToV3KMolFile(const ROMol &mol, const std::string &fName, const MolWriterParams &params, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileWriters.h:141: warning: The following parameter of RDKit::MolToV3KMolFile(const ROMol &mol, const std::string &fName, const MolWriterParams &params, int confId=-1) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Fingerprints.h:120: warning: The following parameter of RDKit::PatternFingerprintMol(const ROMol &mol, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=nullptr, ExplicitBitVect *setOnlyBits=nullptr, bool tautomericFingerprint=false) is not documented:
  parameter 'tautomericFingerprint'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Fingerprints.h:27: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=nullptr, const std::vector< std::uint32_t > *fromAtoms=nullptr, std::vector< std::vector< std::uint32_t > > *atomBits=nullptr, std::map< std::uint32_t, std::vector< std::vector< int > > > *bitInfo=nullptr)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/Fingerprints.h:27: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=nullptr, const std::vector< std::uint32_t > *fromAtoms=nullptr, std::vector< std::vector< std::uint32_t > > *atomBits=nullptr, std::map< std::uint32_t, std::vector< std::vector< int > > > *bitInfo=nullptr) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionRunner.h:94: warning: The following parameter of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) is not documented:
  parameter 'product'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemTransforms/ChemTransforms.h:114: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionRunner.h:66: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/ReactionRunner.h:66: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:99: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:99: warning: The following parameter of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:129: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:129: warning: The following parameter of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:184: warning: The following parameter of RDKit::SubstructMatch(T1 &mol, const T2 &query, std::vector< MatchVectType > &matchVect, bool uniquify=true, bool recursionPossible=true, bool useChirality=false, bool useQueryQueryMatches=false, unsigned int maxMatches=1000, int numThreads=1) is not documented:
  parameter 'numThreads'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:113: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatchCount(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Substruct/SubstructMatch.h:113: warning: The following parameter of RDKit::SubstructMatchCount(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Reaction.h:220: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/Reaction.h:220: warning: The following parameter of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const is not documented:
  parameter 'numProducts'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.h:336: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.h:430: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.h:136: warning: The following parameters of RDKit::AtomEnvironment::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const=0 are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
ound RDGeom::UniformGrid3D...
Generating docs for compound RDGeom::UniformRealValueGrid3D...
Generating docs for namespace RDInfoTheory
Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
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Generating docs for compound RDKit::Atom...
Generating docs for compound RDKit::atomicData...
Generating docs for compound RDKit::AtomIterator_< Atom_, Mol_ >...
Generating docs for compound RDKit::HeteroatomIterator_< Atom_, Mol_ >...
Generating docs for compound RDKit::AromaticAtomIterator_< Atom_, Mol_ >...
Generating docs for compound RDKit::QueryAtomIterator_< Atom_, Mol_ >...
Generating docs for compound RDKit::MatchingAtomIterator_< Atom_, Mol_ >...
Generating docs for compound RDKit::Bond...
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Generating docs for compound RDKit::EnumerationParams...
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Generating docs for compound RDKit::RandomSampleStrategy...
Generating docs for compound RDKit::RandomSampleAllBBsStrategy...
Generating docs for compound RDKit::ChemicalReactionException...
Generating docs for compound RDKit::ChemicalReaction...
Generating docs for compound RDKit::ReactionFingerprintParams...
Generating docs for compound RDKit::ChemicalReactionParserException...
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Generating docs for compound RDKit::RxnSanitizeException...
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Generating docs for compound RDKit::ConformerException...
Generating docs for compound RDKit::Conformer...
Generating docs for compound RDKit::MaxFindBondOrdersItersExceeded...
Generating docs for compound RDKit::MolWriterParams...
Generating docs for compound RDKit::StereoBondThresholds...
Generating docs for compound RDKit::MolWriter...
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Generating docs for compound RDKit::FilterCatalogEntry...
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Generating docs for compound RDKit::AtomInvariantsGenerator...
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Generating docs for compound RDKit::FingerprintGenerator< OutputType >...
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Generating docs for compound RDKit::FragCatalogEntry...
Generating docs for compound RDKit::FragCatGenerator.../build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:71: warning: argument highlight_atoms from the argument list of RDKit::MolDraw2D::drawMolecule has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:71: warning: The following parameter of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=nullptr, const std::map< int, DrawColour > *highlight_bond_map=nullptr, const std::map< int, double > *highlight_radii=nullptr, int confId=-1) is not documented:
  parameter 'highlight_bonds'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:149: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:149: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:149: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:149: warning: argument highlight_atoms from the argument list of RDKit::MolDraw2D::drawMolecules has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/MolDraw2D.h:149: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Resonance.h:114: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)

Generating docs for compound RDKit::FragCatParams...
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Generating docs for nested compound RDKit::RGroupDecompData::UsedLabels...
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Generating docs for compound RDKit::FingerprintVarianceScoreData...
Generating docs for compound RDKit::RGroupDecompositionChromosome...
Generating docs for compound RDKit::GaResult...
Generating docs for compound RDKit::RGroupGa...
Generating docs for compound RDKi/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Abbreviations/Abbreviations.h:106: warning: The following parameter of RDKit::Abbreviations::findApplicableAbbreviationMatches(const ROMol &mol, const std::vector< AbbreviationDefinition > &abbrevs, double maxCoverage=0.4) is not documented:
  parameter 'mol'
t::RGroupMatch...
Generating docs for compound RDKit::CartesianProduct...
Generating docs for compound RDKit::RGroupScorer...
Generating docs for compound RDKit::RingInfo...
Generating docs for compound RDKit::CXXAtomIterator< Graph, Vertex, Iterator, CheckedAtoms, CheckedBonds >...
Generating docs for nested compound RDKit::CXXAtomIterator< Graph, Vertex, Iterator, CheckedAtoms, CheckedBonds >::CXXAtomIter...
Generating docs for compound RDKit::CXXBondIterator< Graph, Edge, Iterator, Checked >...
Generating docs for nested compound RDKit::CXXBondIterator< Graph, Edge, Iterator, Checked >::CXXBondIter...
Generating docs for compound RDKit::ROMol...
Generating docs for compound RDKit::RWMol...
Generating docs for compound RDKit::MolSanitizeException...
Generating docs for compound RDKit::AtomSanitizeException...
Generating docs for compound RDKit::AtomValenceException...
Generating docs for compound RDKit::AtomKekulizeException...
Generating docs for compound RDKit::KekulizeException...
Generating docs for compound RDKit::SLNParseException...
Generating docs for compound RDKit::RigorousEnhancedStereoException...
Generating docs for compound RDKit::SmilesWriteParams...
Generating docs for compound RDKit::StereoGroup...
Generating docs for compound RDKit::SubsetOptions...
Generating docs for compound RDKit::SubsetInfo...
Generating docs for compound RDKit::SubstanceGroupException...
Generating docs for compound RDKit::SubstanceGroup...
Generating docs for nested compound RDKit::SubstanceGroup::AttachPoint...
Generating docs for nested compound RDKit::SubstanceGroup::CState...
Generating docs for compound RDKit::SubstructMatchParameters...
Generating docs for compound RDKit::MolMatchFinalCheckFunctor...
Generating docs for compound RDKit::AtomCoordsMatchFunctor...
Generating docs for compound RDKit::MolHolderBase...
Generating docs for compound RDKit::MolHolder...
Generating docs for compound RDKit::CachedMolHolder...
Generating docs for compound RDKit::CachedSmilesMolHolder...
Generating docs for compound RDKit::CachedTrustedSmilesMolHolder...
Generating docs for compound RDKit::FPHolderBase...
Generating docs for compound RDKit::PatternHolder...
Generating docs for compound RDKit::TautomerPatternHolder...
Generating docs for compound RDKit::KeyHolderBase...
Generating docs for compound RDKit::KeyFromPropHolder...
Generating docs for compound RDKit::SubstructLibrary...
Generating docs for compound RDKit::TautomerQuery...
Generating docs for compound RDKit::Snapshot...
Generating docs for compound RDKit::Trajectory...
Generating docs for compound RDKit::DataStructsExplicitBitVecPropHandler...
Generating docs for compound RDKit::DiscreteDistMat...
Generating docs for compound RDKit::DiscreteValueVect...
Generating docs for compound RDKit::FPBReader...
Generating docs for compound RDKit::MultiFPBReader...
Generating docs for compound RDKit::RealValueVect...
Generating docs for compound RDKit::SparseIntVect< IndexType >...
Generating docs for compound RDKit::BadFileException...
Generating docs for compound RDKit::ControlCCaught...
Generating docs for compound RDKit::ControlCHandler...
Generating docs for compound RDKit::Dict...
Generating docs for nested compound RDKit::Dict::Pair...
Generating docs for compound RDKit::PairHolder...
Generating docs for compound RDKit::FileParseException...
Generating docs for compound RDKit::RDAny...
Generating docs for compound RDKit::RDProps...
Generating docs for compound RDKit::RDValue...
Generating docs for compound RDKit::CustomPropHandler...
Generating docs for compound RDKit::ltDouble...
Generating docs for compound RDKit::larger_of< T >...
Generating docs for compound RDKit::charptr_functor...
Generating docs for compound RDKit::ExtendedQueryMol...
Generating docs for namespace RDKit::Abbreviations
Generating docs for compound RDKit::Abbreviations::AbbreviationDefinition...
Generating docs for compound RDKit::Abbreviations::AbbreviationMatch...
Generating docs for namespace RDKit::Abbreviations::common_properties
Generating docs for namespace RDKit::Abbreviations::Utils
Generating docs/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.h:136: warning: The following parameters of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/AtomPairs.h:97: warning: The following parameter of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< std::uint32_t > *fromAtoms=nullptr, const std::vector< std::uint32_t > *ignoreAtoms=nullptr, const std::vector< std::uint32_t > *atomInvariants=nullptr, bool includeChirality=false, bool use2D=true, int confId=-1) is not documented:
  parameter 'confId'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintUtil.h:75: warning: The following parameter of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) is not documented:
  parameter 'includeChirality'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Canon.h:98: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=nullptr, const std::vector< std::string > *bondSymbols=nullptr, bool doIsomericSmiles=false, bool doRandom=false, bool doChiralInversions=true) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
  parameter 'doChiralInversions'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Chirality.h:425: warning: The following parameters of RDKit::Chirality::findMesoCenters(const ROMol &mol, bool includeIsotopes=true, bool includeAtomMaps=false) are not documented:
  parameter 'includeIsotopes'
  parameter 'includeAtomMaps'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Chirality.h:143: warning: The following parameter of RDKit::Chirality::findPotentialStereo(ROMol &mol, bool cleanIt, bool flagPossible=true) is not documented:
  parameter 'flagPossible'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Chirality.h:195: warning: The following parameter of RDKit::Chirality::getTrigonalBipyramidalAxialBond(const Atom *center, int which=0) is not documented:
  parameter 'center'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/CIPLabeler/CIPLabeler.h:46: warning: The following parameter of RDKit::CIPLabeler::assignCIPLabels(ROMol &mol, unsigned int maxRecursiveIterations=0) is not documented:
  parameter 'maxRecursiveIterations'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Lipinski.h:45: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/Lipinski.h:45: warning: The following parameter of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) is not documented:
  parameter 'useStrictDefinition'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Descriptors/USRDescriptor.h:68: warning: The following parameter of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int > > &atomIds, int confId=-1) is not documented:
  parameter 'atomIds'
 for namespace RDKit::AtomPair
Generating docs for compound RDKit::AtomPair::AtomPairAtomInvGenerator...
Generating docs for compound RDKit::AtomPair::AtomPairArguments...
Generating docs for compound RDKit::AtomPair::AtomPairAtomEnv< OutputType >...
Generating docs for compound RDKit::AtomPair::AtomPairEnvGenerator< OutputType >...
Generating docs for namespace RDKit::AtomPairs
Generating docs for namespace RDKit::Atropisomers
Generating docs for namespace RDKit::Canon
Generating docs for compound RDKit::Canon::MolStackUnion...
Generating docs for compound RDKit::Canon::MolStackElem...
Generating docs for compound RDKit::Canon::bondholder...
Generating docs for compound RDKit::Canon::canon_atom...
Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
Generating docs for compound RDKit::Canon::SpecialSymmetryAtomCompareFunctor...
Generating docs for compound RDKit::Canon::AtomCompareFunctor...
Generating docs for compound RDKit::Canon::ChiralAtomCompareFunctor...
Generating docs for namespace RDKit::Canon::detail
Generating docs for namespace RDKit::Chirality
Generating docs for compound RDKit::Chirality::StereoInfo...
Generating docs for compound RDKit::Chirality::BondWedgingParameters...
Generating docs for compound RDKit::Chirality::WedgeInfoBase...
Generating docs for compound RDKit::Chirality::WedgeInfoChiral...
Generating docs for compound RDKit::Chirality::WedgeInfoAtropisomer...
Generating docs for namespace RDKit::Chirality::detail
Generating docs for namespace RDKit::CIPLabeler
Generating docs for compound RDKit::CIPLabeler::MaxIterationsExceeded...
Generating docs for compound RDKit::CIPLabeler::CIPMolSpan< T, U >...
Generating docs for nested compound RDKit::CIPLabeler::CIPMolSpan< T, U >::CIPMolIter...
Generating docs for compound RDKit::CIPLabeler::CIPMol...
Generating docs for compound RDKit::CIPLabeler::AtropisomerBond...
Generating docs for compound RDKit::CIPLabeler::Configuration...
Generating docs for compound RDKit::CIPLabeler::Sp2Bond...
Generating docs for compound RDKit::CIPLabeler::Tetrahedral...
Generating docs for compound RDKit::CIPLabeler::Digraph...
Generating docs for compound RDKit::CIPLabeler::Edge...
Generating docs for compound RDKit::CIPLabeler::Node...
Generating docs for compound RDKit::CIPLabeler::Priority...
Generating docs for compound RDKit::CIPLabeler::PairList...
Generating docs for compound RDKit::CIPLabeler::Rule1a...
Generating docs for compound RDKit::CIPLabeler::Rule1b...
Generating docs for compound RDKit::CIPLabeler::Rule2...
Generating docs for compound RDKit::CIPLabeler::Rule3...
Generating docs for compound RDKit::CIPLabeler::Rule4a...
Generating docs for compound RDKit::CIPLabeler::Rule4b...
Generating docs for compound RDKit::CIPLabeler::Rule4c...
Generating docs for compound RDKit::CIPLabeler::Rule5...
Generating docs for compound RDKit::CIPLabeler::Rule5New...
Generating docs for compound RDKit::CIPLabeler::Rule6...
Generating docs for compound RDKit::CIPLabeler::Rules...
Generating docs for compound RDKit::CIPLabeler::SequenceRule...
Generating docs for compound RDKit::CIPLabeler::Sort...
Generating docs for compound RDKit::CIPLabeler::TooManyNodesException...
Generating docs for namespace RDKit::CIPLabeler_detail
Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Deprotect
Generating docs for compound RDKit::Deprotect::DeprotectData...
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParams...
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
Generating docs for compound RDKit::Descriptors::DoubleCubicLatticeVolume...
Generating docs for compound RDKit::Descriptors::PropertyFunctor...
Generating docs for compound RDKit::Descriptors::Properties...
Generating docs for namespace RDKit::Descriptors::detail
Generating docs for namespace RDKit::detail
Generating docs for compound RDKit::detail::MCSParametersInternal...
Generating docs for namespace RDKit::details
Generating d/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/Embedder.h:306: warning: The following parameter of RDKit::DGeomHelpers::EmbedMultipleConfs(ROMol &mol, INT_VECT &res, unsigned int numConfs=10, int numThreads=1, unsigned int maxIterations=30, int seed=-1, bool clearConfs=true, bool useRandomCoords=false, double boxSizeMult=2.0, bool randNegEig=true, unsigned int numZeroFail=1, double pruneRmsThresh=-1.0, const std::map< int, RDGeom::Point3D > *coordMap=nullptr, double optimizerForceTol=1e-3, bool ignoreSmoothingFailures=false, bool enforceChirality=true, bool useExpTorsionAnglePrefs=false, bool useBasicKnowledge=false, bool verbose=false, double basinThresh=5.0, bool onlyHeavyAtomsForRMS=false, unsigned int ETversion=2, bool useSmallRingTorsions=false, bool useMacrocycleTorsions=true, bool useMacrocycle14config=true, unsigned int timeout=0) is not documented:
  parameter 'timeout'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:37: warning: The following parameters of RDKit::DGeomHelpers::setTopolBounds(const ROMol &mol, DistGeom::BoundsMatPtr mmat, bool set15bounds=true, bool scaleVDW=false, bool useMacrocycle14config=false, bool forceTransAmides=true, bool set14bounds=true, bool set13bounds=true) are not documented:
  parameter 'forceTransAmides'
  parameter 'set14bounds'
  parameter 'set13bounds'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.h:161: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatchers.h:218: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: The following parameter of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/GaussianShape/SingleConformerAlignment.h:38: warning: The following parameters of RDKit::GaussianShape::SingleConformerAlignment::SingleConformerAlignment(const std::vector< double > &ref, const std::vector< double > &refAlphas, const int *refTypes, const boost::dynamic_bitset<> *refCarbonRadii, int nRefShape, int nRefColor, double refShapeVol, double refColorVol, const std::vector< double > &fit, const std::vector< double > &fitAlphas, const int *fitTypes, const boost::dynamic_bitset<> *fitCarbonRadii, int nFitShape, int nFitColor, double fitShapeVol, double fitColorVol, const std::array< double, 7 > &initQuatTrans, OptimMode optimMode, double simAlpha, double simBeta, double mixingParam, bool useCutoff, double distCutoff, double shapeConvergenceCriterion, unsigned int maxIts) are not documented:
  parameter 'initQuatTrans'
  parameter 'shapeConvergenceCriterion'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MHFP.h:93: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::CreateShingling(const ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MHFP.h:132: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::Encode(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MHFP.h:183: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::EncodeSECFP(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1, size_t length=2048) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/MMPA.h:28: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MMPA/MMPA.h:49: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
ocs for namespace RDKit::DGeomHelpers
Generating docs for compound RDKit::DGeomHelpers::EmbedParameters...
Generating docs for namespace RDKit::DTags
Generating docs for namespace RDKit::EnumerateStereoisomers
Generating docs for compound RDKit::EnumerateStereoisomers::StereoEnumerationOptions...
Generating docs for compound RDKit::EnumerateStereoisomers::StereoisomerEnumerator...
Generating docs for namespace RDKit::EnumerateStereoisomers::details
Generating docs for compound RDKit::EnumerateStereoisomers::details::Flipper...
Generating docs for compound RDKit::EnumerateStereoisomers::details::AtomFlipper...
Generating docs for compound RDKit::EnumerateStereoisomers::details::BondFlipper...
Generating docs for compound RDKit::EnumerateStereoisomers::details::StereoGroupFlipper...
Generating docs for compound RDKit::EnumerateStereoisomers::details::AtropisomerFlipper...
Generating docs for namespace RDKit::EnumerationStrategyPickler
Generating docs for namespace RDKit::EnumerationTypes
Generating docs for namespace RDKit::FileParsers
Generating docs for namespace RDKit::FileParsers::schrodinger
Generating docs for namespace RDKit::FileParserUtils
Generating docs for namespace RDKit::FilterMatchOps
Generating docs for compound RDKit::FilterMatchOps::And...
Generating docs for compound RDKit::FilterMatchOps::Or...
Generating docs for compound RDKit::FilterMatchOps::Not...
Generating docs for namespace RDKit::FMCS
Generating docs for compound RDKit::FMCS::Composition2N...
Generating docs for compound RDKit::FMCS::ExecStatistics...
Generating docs for compound RDKit::FMCS::DuplicatedSeedCache...
Generating docs for nested compound RDKit::FMCS::DuplicatedSeedCache::TKey...
Generating docs for compound RDKit::FMCS::Graph...
Generating docs for compound RDKit::FMCS::TArray2D< T >...
Generating docs for compound RDKit::FMCS::MaximumCommonSubgraph...
Generating docs for compound RDKit::FMCS::MolFragment...
Generating docs for compound RDKit::FMCS::NewBond...
Generating docs for compound RDKit::FMCS::Seed...
Generating docs for compound RDKit::FMCS::SeedSet...
Generating docs for compound RDKit::FMCS::SubstructureCache...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::KeyNumericMetrics...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::HashKey...
Generating docs for compound RDKit::FMCS::Target...
Generating docs for compound RDKit::FMCS::TargetMatch...
Generating docs for namespace RDKit::ForceFieldsHelper
Generating docs for namespace RDKit::ForceFieldsHelper::detail
Generating docs for namespace RDKit::GaussianShape
Generating docs for compound RDKit::GaussianShape::CustomFeature...
Generating docs for compound RDKit::GaussianShape::ShapeInputOptions...
Generating docs for compound RDKit::GaussianShape::ShapeInput...
Generating docs for compound RDKit::GaussianShape::ShapeOverlayOptions...
Generating docs for compound RDKit::GaussianShape::SingleConformerAlignment...
Generating docs for namespace RDKit::GeneralizedSubstruct
Generating docs for compound RDKit::GeneralizedSubstruct::ExtendedQueryMol...
Generating docs for namespace RDKit::GeneralMolSupplier
Generating docs for compound RDKit::GeneralMolSupplier::SupplierOptions...
Generating docs for namespace RDKit::GenericGroups
Generating docs for namespace RDKit::GenericGroups::Matchers
Generating docs for namespace RDKit::Local
Generating docs for namespace RDKit::MACCSFingerprints
Generating docs for namespace RDKit::MHFPFingerprints
Generating docs for compound RDKit::MHFPFingerprints::MHFPEncoder...
Generating docs for namespace RDKit::MHFPFingerprints::FNV
Generating docs for namespace RDKit::MMFF
Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
Generating docs for compound RDKit::MMFF::MMFFMolProperties...
Generating docs for namespace RDKit::MMFF::DefaultParameters
Generating docs for namespace RDKit::MMFF::Tools
Generating docs for compound RDKit::MMFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MMPA::detail
Generating docs for namespace RDKit/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolAlign/AlignMolecules.h:271: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::MolAlign::getAllConformerBestRMS(const ROMol &mol, const BestAlignmentParams &params)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMol.h:45: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMol::DrawMol(const ROMol &mol, const std::string &legend, int width, int height, const MolDrawOptions &drawOptions, DrawText &textDrawer, const std::vector< int > *highlightAtoms=nullptr, const std::vector< int > *highlightBonds=nullptr, const std::map< int, DrawColour > *highlightAtomMap=nullptr, const std::map< int, DrawColour > *highlightBondMap=nullptr, const std::vector< std::pair< DrawColour, DrawColour > > *bondColours=nullptr, const std::map< int, double > *highlight_radii=nullptr, bool includeAnnotations=true, int confId=-1, bool isReactionMol=false)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMol.h:45: warning: The following parameters of RDKit::MolDraw2D_detail::DrawMol::DrawMol(const ROMol &mol, const std::string &legend, int width, int height, const MolDrawOptions &drawOptions, DrawText &textDrawer, const std::vector< int > *highlightAtoms=nullptr, const std::vector< int > *highlightBonds=nullptr, const std::map< int, DrawColour > *highlightAtomMap=nullptr, const std::map< int, DrawColour > *highlightBondMap=nullptr, const std::vector< std::pair< DrawColour, DrawColour > > *bondColours=nullptr, const std::map< int, double > *highlight_radii=nullptr, bool includeAnnotations=true, int confId=-1, bool isReactionMol=false) are not documented:
  parameter 'bondColours'
  parameter 'highlight_radii'
  parameter 'includeAnnotations'
  parameter 'isReactionMol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCH.h:28: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMolMCH::DrawMolMCH(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCH.h:28: warning: The following parameter of RDKit::MolDraw2D_detail::DrawMolMCH::DrawMolMCH(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1) is not documented:
  parameter 'highlight_radii'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHCircleAndLine.h:24: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMolMCHCircleAndLine::DrawMolMCHCircleAndLine(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHCircleAndLine.h:24: warning: The following parameter of RDKit::MolDraw2D_detail::DrawMolMCHCircleAndLine::DrawMolMCHCircleAndLine(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1) is not documented:
  parameter 'highlight_radii'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHLasso.h:36: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMolMCHLasso::DrawMolMCHLasso(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolDraw2D/DrawMolMCHLasso.h:36: warning: The following parameter of RDKit::MolDraw2D_detail::DrawMolMCHLasso::DrawMolMCHLasso(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1) is not documented:
  parameter 'highlight_radii'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolEnumerator/MolEnumerator.h:263: warning: The following parameter of RDKit::MolEnumerator::enumerate(const ROMol &mol, size_t maxPerOperation=0) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/MolInterchange.h:80: warning: The following parameter of RDKit::MolInterchange::MolsToJSONData(const std::vector< T > &mols, const JSONWriteParameters &params=defaultJSONWriteParameters) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInterchange/MolInterchange.h:89: warning: The following parameter of RDKit::MolInterchange::MolToJSONData(const T &mol, const JSONWriteParameters &params=defaultJSONWriteParameters) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:354: warning: The following parameters of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false, bool mergeIsotopes=false) are not documented:
  parameter 'mergeUnmappedOnly'
  parameter 'mergeIsotopes'
::MolAlign
Generating docs for compound RDKit::MolAlign::MolAlignException...
Generating docs for compound RDKit::MolAlign::BestAlignmentParams...
Generating docs for compound RDKit::MolAlign::O3AFuncData...
Generating docs for compound RDKit::MolAlign::O3AConstraint...
Generating docs for compound RDKit::MolAlign::O3AConstraintVect...
Generating docs for compound RDKit::MolAlign::MolHistogram...
Generating docs for compound RDKit::MolAlign::LAP...
Generating docs for compound RDKit::MolAlign::SDM...
Generating docs for compound RDKit::MolAlign::O3A...
Generating docs for namespace RDKit::MolAlign::details
Generating docs for namespace RDKit::MolDraw2D_detail
Generating docs for compound RDKit::MolDraw2D_detail::AtomSymbol...
Generating docs for compound RDKit::MolDraw2D_detail::DrawAnnotation...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMol...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMolMCH...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMolMCHCircleAndLine...
Generating docs for compound RDKit::MolDraw2D_detail::LinePair...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMolMCHLasso...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShape...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeArrow...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeEllipse...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeSimpleLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapePolyLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeSolidWedge...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeDashedWedge...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeWavyLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeArc...
Generating docs for compound RDKit::MolDraw2D_detail::DrawText...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextCairo...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFT...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTCairo...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTJS...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTSVG...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextJS...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextNotFT...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextSVG...
Generating docs for compound RDKit::MolDraw2D_detail::SGroupDataLabel...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTQt...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextQt...
Generating docs for compound RDKit::MolDraw2D_detail::StringRect...
Generating docs for namespace RDKit::MolDraw2DUtils
Generating docs for compound RDKit::MolDraw2DUtils::ContourParams...
Generating docs for namespace RDKit::MolEnumerator
Generating docs for compound RDKit::MolEnumerator::LinkNode...
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Generating docs for compound RDKit::MolEnumerator::PositionVariationOp...
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Generating docs for namespace RDKit::MolEnumerator::detail
Generating docs for namespace RDKit::MolEnumerator::utils
Generating docs for namespace RDKit::MolFragmenter
Generating docs for compound RDKit::MolFragmenter::FragmenterBondType...
Generating docs for namespace RDKit::MolHash
Generating docs for namespace RDKit::MolInterchange
Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
Generating docs for compound RDKit::MolInterchange::JSONWriteParameters...
Generating docs for namespace RDKit::MolOps
Generating docs for compound RDKit::MolOps::AddHsParameters...
Generating docs for compound RDKit::MolOps::RemoveHsParameters...
Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
Generating docs for compound RDKit::MolOps::Hybri/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1361: warning: argument 'addAsQueries' of command @param is not found in the argument list of RDKit::MolOps::details::addExplicitAttachmentPoint(RWMol &mol, unsigned int atomIdx, unsigned int val, bool addAsQuery=true, bool addCoords=true)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1361: warning: The following parameter of RDKit::MolOps::details::addExplicitAttachmentPoint(RWMol &mol, unsigned int atomIdx, unsigned int val, bool addAsQuery=true, bool addCoords=true) is not documented:
  parameter 'addAsQuery'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1378: warning: argument 'mol' of command @param is not found in the argument list of RDKit::MolOps::details::isAttachmentPoint(const Atom *atom, bool markedOnly=true)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolOps.h:1378: warning: The following parameter of RDKit::MolOps::details::isAttachmentPoint(const Atom *atom, bool markedOnly=true) is not documented:
  parameter 'atom'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:223: warning: argument countSimulation from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:223: warning: argument includeChirality from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:223: warning: argument onlyNonzeroInvariants from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:288: warning: argument countSimulation from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:288: warning: argument includeChirality from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:288: warning: argument onlyNonzeroInvariants from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
dizations...
Generating docs for namespace RDKit::MolOps::details
Generating docs for namespace RDKit::MolProcessing
Generating docs for namespace RDKit::MolProcessing::details
Generating docs for namespace RDKit::MolShapes
Generating docs for namespace RDKit::MolStandardize
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
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Generating docs for compound RDKit::MolStandardize::LargestFragmentChooser...
Generating docs for nested compound RDKit::MolStandardize::LargestFragmentChooser::Largest...
Generating docs for compound RDKit::MolStandardize::FragmentCatalogEntry...
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Generating docs for compound RDKit::MolStandardize::Pipeline...
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Generating docs for compound RDKit::MolStandardize::TautomerEnumeratorResult...
Generating docs for nested compound RDKit::MolStandardize::TautomerEnumeratorResult::const_iterator...
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Generating docs for compound RDKit::MolStandardize::ValidationMethod...
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Generating docs for compound RDKit::MolStandardize::NoAtomValidation...
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Generating docs for compound RDKit::MolStandardize::Layout2DValidation...
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Generating docs for namespace RDKit::MolStandardize::defaults
Generating docs for namespace RDKit::MolStandardize::Operations
Generating docs for namespace RDKit::MolStandardize::TautomerScoringFunctions
Generating docs for compound RDKit::MolStandardize::TautomerScoringFunctions::SubstructTerm...
Generating docs for namespace RDKit::MorganFingerprint
Generating docs for compound RDKit::MorganFingerprint::MorganAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganBondInvGenerator.../build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganGenerator.h:187: warning: The following parameter of RDKit::MorganFingerprint::MorganAtomEnv::MorganAtomEnv(const std::uint32_t code, const unsigned int atomId, const unsigned int layer, const ROMol *mol) is not documented:
  parameter 'mol'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.h:136: warning: The following parameters of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/MorganFingerprints.h:117: warning: The following parameter of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< boost::uint32_t > *invariants=nullptr, const std::vector< boost::uint32_t > *fromAtoms=nullptr, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=nullptr, bool includeRedundantEnvironments=false) is not documented:
  parameter 'nBits'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.h:136: warning: The following parameters of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:26: warning: The following parameter of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<> > *atomTypes=nullptr) is not documented:
  parameter 'atomTypes'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/SanitizeRxn.h:129: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/ChemReactions/SanitizeRxn.h:129: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SmilesParse/SmilesWrite.h:98: warning: argument 'bondIn' of command @param is not found in the argument list of RDKit::SmilesWrite::GetAtomSmiles(const Atom *atom, bool doKekule=false, const Bond *=nullptr, bool allHsExplicit=false, bool isomericSmiles=true)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpace.h:305: warning: The following parameter of RDKit::SynthonSpaceSearch::SynthonSpace::readTextFile(const std::string &inFilename, bool &cancelled) is not documented:
  parameter 'cancelled'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpace.h:216: warning: The following parameter of RDKit::SynthonSpaceSearch::SynthonSpace::substructureSearch(const GeneralizedSubstruct::ExtendedQueryMol &query, const SubstructMatchParameters &matchParams=SubstructMatchParameters(), const SynthonSpaceSearchParams &params=SynthonSpaceSearchParams()) is not documented:
  parameter 'matchParams'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpace.h:199: warning: The following parameter of RDKit::SynthonSpaceSearch::SynthonSpace::substructureSearch(const ROMol &query, const SearchResultCallback &callback, const SubstructMatchParameters &matchParams=SubstructMatchParameters(), const SynthonSpaceSearchParams &params=SynthonSpaceSearchParams()) is not documented:
  parameter 'matchParams'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/SynthonSpaceSearch/SynthonSpace.h:185: warning: The following parameter of RDKit::SynthonSpaceSearch::SynthonSpace::substructureSearch(const ROMol &query, const SubstructMatchParameters &matchParams=SubstructMatchParameters(), const SynthonSpaceSearchParams &params=SynthonSpaceSearchParams()) is not documented:
  parameter 'matchParams'

Generating docs for compound RDKit::MorganFingerprint::MorganArguments...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomEnv< OutputType >...
Generating docs for compound RDKit::MorganFingerprint::MorganEnvGenerator< OutputType >...
Generating docs for namespace RDKit::MorganFingerprints
Generating docs for compound RDKit::MorganFingerprints::ss_matcher...
Generating docs for namespace RDKit::PicklerOps
Generating docs for namespace RDKit::PNGData
Generating docs for namespace RDKit::QueryOps
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Generating docs for compound RDKit::RascalMCES::PartitionSet...
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Generating docs for compound RDKit::RDKitFP::RDKitFPArguments...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomInvGenerator...
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Generating docs for compound RDKit::RDTypeTag::detail::Value...
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Generating docs for compound RDKit::ScaffoldNetwork::ScaffoldNetworkParams...
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Generating docs for namespace RDKit::SLNParse
Generating docs for compound RDKit::SLNParse::AttribType...
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Generating docs for namespace RDKit::SmilesParse
Generating docs for compound RDKit::SmilesParse::SmilesParseException...
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Generating docs for compound RDKit::StructureCheck::ChargeFix...
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Generating docs for compound RDKit::StructureCheck::StructChecker...
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Generating docs for namespace RDKit::Subgraphs
Generating docs for namespace RDKit::SubstanceGroupChecks
Generating docs for namespace RDKit::SynthonSpaceSearch
Generating docs for compound RDKit::SynthonSpaceSearch::SearchResults...
Generating docs for compound RDKit::SynthonSpaceSearch::Synthon...
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Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceSearchParams...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpace...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceFingerprintSearcher...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceHitSet...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceFPHitSet...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceRascalSearcher...
Generating docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceSearcher...
Genera/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:99: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool includeChirality=false, uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, bool countSimulation=true, std::uint32_t fpSize=2048, std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, bool ownsAtomInvGen=false)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:99: warning: The following parameter of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool includeChirality=false, uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, bool countSimulation=true, std::uint32_t fpSize=2048, std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, bool ownsAtomInvGen=false) is not documented:
  parameter 'countSimulation'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:34: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality=false, const uint32_t torsionAtomCount=4, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:34: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality=false, const uint32_t torsionAtomCount=4, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048) is not documented:
  parameter 'countSimulation'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:70: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::TopologicalTorsionAtomEnv(OutputType bitId, INT_VECT atomPath) is not documented:
  parameter 'atomPath'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/Fingerprints/FingerprintGenerator.h:136: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CDXMLParser.h:143: warning: argument 'fileName' of command @param is not found in the argument list of RDKit::v1::CDXMLFileToMols(const std::string &filename, bool sanitize=true, bool removeHs=true)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CDXMLParser.h:143: warning: The following parameter of RDKit::v1::CDXMLFileToMols(const std::string &filename, bool sanitize=true, bool removeHs=true) is not documented:
  parameter 'filename'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/FileParsers.h:120: warning: argument line from the argument list of RDKit::v1::MolDataStreamToMol has multiple @param documentation sections
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CDXMLParser.h:65: warning: argument 'fileName' of command @param is not found in the argument list of RDKit::v2::CDXMLParser::MolsFromCDXMLFile(const std::string &filename, const CDXMLParserParams &params=CDXMLParserParams(true, true, CDXMLFormat::Auto))
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/CDXMLParser.h:65: warning: The following parameter of RDKit::v2::CDXMLParser::MolsFromCDXMLFile(const std::string &filename, const CDXMLParserParams &params=CDXMLParserParams(true, true, CDXMLFormat::Auto)) is not documented:
  parameter 'filename'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSupplier.h:373: warning: argument 'sanitize' of command @param is not found in the argument list of RDKit::v2::FileParsers::SDMolSupplier::SDMolSupplier(const std::string &fileName, const MolFileParserParams &params=MolFileParserParams())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSupplier.h:373: warning: argument 'removeHs' of command @param is not found in the argument list of RDKit::v2::FileParsers::SDMolSupplier::SDMolSupplier(const std::string &fileName, const MolFileParserParams &params=MolFileParserParams())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSupplier.h:373: warning: argument 'strictParsing' of command @param is not found in the argument list of RDKit::v2::FileParsers::SDMolSupplier::SDMolSupplier(const std::string &fileName, const MolFileParserParams &params=MolFileParserParams())
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/FileParsers/MolSupplier.h:373: warning: The following parameter of RDKit::v2::FileParsers::SDMolSupplier::SDMolSupplier(const std::string &fileName, const MolFileParserParams &params=MolFileParserParams()) is not documented:
  parameter 'params'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h:117: warning: argument 'pos' of command @param is not found in the argument list of RDMIF::Coulomb::Coulomb(const std::vector< double > &charges, const std::vector< RDGeom::Point3D > &positions, double probeCharge=1.0, bool absVal=false, double alpha=0.0, double cutoff=1.0)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h:117: warning: The following parameter of RDMIF::Coulomb::Coulomb(const std::vector< double > &charges, const std::vector< RDGeom::Point3D > &positions, double probeCharge=1.0, bool absVal=false, double alpha=0.0, double cutoff=1.0) is not documented:
  parameter 'positions'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h:220: warning: argument 'pos' of command @param is not found in the argument list of RDMIF::CoulombDielectric::CoulombDielectric(const std::vector< double > &charges, const std::vector< RDGeom::Point3D > &positions, double probeCharge=1.0, bool absVal=false, double alpha=0.0, double cutoff=1.0, double epsilon=80.0, double xi=4.0)
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/GraphMol/MolInteractionFields/MIFDescriptors.h:220: warning: The following parameter of RDMIF::CoulombDielectric::CoulombDielectric(const std::vector< double > &charges, const std::vector< RDGeom::Point3D > &positions, double probeCharge=1.0, bool absVal=false, double alpha=0.0, double cutoff=1.0, double epsilon=80.0, double xi=4.0) is not documented:
  parameter 'positions'
ting docs for compound RDKit::SynthonSpaceSearch::SynthonSpaceSubstructureSearcher...
Generating docs for namespace RDKit::SynthonSpaceSearch::details
Generating docs for compound RDKit::SynthonSpaceSearch::details::MemoryMappedFileReader...
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Generating docs for namespace RDKit::TopologicalTorsion
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Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionEnvGenerator< OutputType >...
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Generating docs for namespace RDKit::UFF::Tools
Generating docs for compound RDKit::UFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::Utils
Generating docs for compound RDKit::Utils::LocaleSwitcher...
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Generating docs for compound RDKit::v1::MolSupplier...
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Generating docs for namespace RDKit::v2
Generating docs for namespace RDKit::v2::CDXMLParser
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Generating docs for namespace RDKit::v2::FileParsers
Generating docs for compound RDKit::v2::FileParsers::MolFileUnhandledFeatureException...
Generating docs for compound RDKit::v2::FileParsers::MolFileParserParams...
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Generating docs for compound RDKit::v2::FileParsers::SmilesMolSupplier...
Generating docs for compound RDKit::v2::FileParsers::TDTMolSupplierParams...
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Generating docs for namespace RDKit::v2::MarvinParser
Generating docs for compound RDKit::v2::MarvinParser::MrvParserParams...
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Generating docs for compound RDKit::v2::ReactionParser::ReactionSmartsParserParams...
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Generating docs for compound RDKit::v2::SmilesParse::SmilesParserParams...
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Generating docs for compound RDLog::LogStateSetter...
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Generating docs for namespace RDMIF
Generating docs for compound RDMIF::Coulomb...
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Generating docs for compound RDMIF::VdWaals...
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Generating docs for compound RDMIF::HBond...
Gen/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/HierarchicalClusterPicker.h:48: warning: The following parameter of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const is not documented:
  parameter 'distMat'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/LeaderPicker.h:48: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/LeaderPicker.h:48: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/LeaderPicker.h:87: warning: The following parameters of RDPickers::LeaderPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize, const RDKit::INT_VECT &firstPicks, double threshold, int nthreads) const are not documented:
  parameter 'threshold'
  parameter 'nthreads'
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/MaxMinPicker.h:44: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/SimDivPickers/MaxMinPicker.h:44: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
erating docs for compound RDMIF::Hydrophilic...
Generating docs for namespace RDNumeric
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Generating docs for compound RDPickers::DistPicker...
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finalizing index lists...
writing tag file...
Running plantuml with JAVA...
type lookup cache used 17402/65536 hits=69679 misses=22143
symbol lookup cache used 33049/65536 hits=260088 misses=33049
finished...
(cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book; RDBASE=/build/rdkit-binaries-forky-amd64/rdkit-202603.4 /usr/bin/make html)
make[2]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book'
mkdir -p _build/html/cppapi
cp -r /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Code/docs/*  _build/html/cppapi
cp -r C++Examples  _build/html/
sphinx-build -b html -d _build/doctrees   . _build/html
Running Sphinx v9.1.0
loading translations [en]... done
WARNING: html_static_path entry '_static' does not exist
myst v5.1.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, strikethrough_single_tilde=False, colon_fence_exact_match=False, suppress_warnings=[], highlight_code_blocks=True)
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/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/BackwardsIncompatibleChanges.md:49: WARNING: duplicate label changes to canonicalization, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/BackwardsIncompatibleChanges.md [autosectionlabel.BackwardsIncompatibleChanges]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cartridge.md:732: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/BackwardsIncompatibleChanges.md [autosectionlabel.Cartridge]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst:7: WARNING: duplicate label introduction, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cartridge.md [autosectionlabel.Cookbook]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst:10: WARNING: duplicate label what is this?, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cartridge.md [autosectionlabel.Cookbook]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst:2581: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cartridge.md [autosectionlabel.Cookbook]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md:3: WARNING: duplicate label what is this?, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst [autosectionlabel.GettingStartedInC++]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md:305: WARNING: duplicate label writing molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst [autosectionlabel.GettingStartedInC++]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1721: WARNING: image file not readable: images/rascal_1.png [image.not_readable]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1726: WARNING: image file not readable: images/rascal_2.png [image.not_readable]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1731: WARNING: image file not readable: images/rascal_3.png [image.not_readable]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:12: WARNING: duplicate label what is this?, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:30: WARNING: duplicate label reading single molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:104: WARNING: duplicate label reading sets of molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:208: WARNING: duplicate label writing molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:393: WARNING: duplicate label writing sets of molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:434: WARNING: duplicate label working with molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:438: WARNING: duplicate label looping over atoms and bonds, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:481: WARNING: duplicate label ring information, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:550: WARNING: duplicate label modifying molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:618: WARNING: duplicate label working with 2d molecules: generating depictions, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:668: WARNING: duplicate label working with 3d molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:794: WARNING: duplicate label preserving molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:850: WARNING: duplicate label drawing molecules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1089: WARNING: duplicate label substructure searching, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1154: WARNING: duplicate label stereochemistry in substructure matches, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:1192: WARNING: duplicate label atom map indices in smarts, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:3362: WARNING: duplicate label substructure searching, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:3660: WARNING: duplicate label the sssr problem, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInC++.md [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst:4074: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst [autosectionlabel.GettingStartedInPython]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:437: WARNING: duplicate label building rdkit for development, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md [autosectionlabel.GettingStartedWithContributing]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:443: WARNING: duplicate label where should i put my code?, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md [autosectionlabel.GettingStartedWithContributing]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:447: WARNING: duplicate label coding standards, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md [autosectionlabel.GettingStartedWithContributing]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:460: WARNING: duplicate label tests, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md [autosectionlabel.GettingStartedWithContributing]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:494: WARNING: duplicate label documentation, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md [autosectionlabel.GettingStartedWithContributing]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md:437: WARNING: duplicate label recommended extras, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md [autosectionlabel.Install]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md:481: WARNING: duplicate label testing the build (optional, but recommended), other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md [autosectionlabel.Install]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md:486: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst [autosectionlabel.Install]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Overview.md:106: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Install.md [autosectionlabel.Overview]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2835: WARNING: Title underline too short.

Self-Contained Structure Representations (SCSR) for Macromolecules
******************* [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2938: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2942: WARNING: Bullet list ends without a blank line; unexpected unindent. [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2947: WARNING: Title underline too short.

Hydrogen Bonds
------- [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:3025: ERROR: Error in "image" directive:
no content permitted.

.. image:: images/WobbleRna.png

 Full Example of SCSR files: [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:3028: WARNING: Explicit markup ends without a blank line; unexpected unindent. [docutils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:179: WARNING: duplicate label aromaticity, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:388: WARNING: duplicate label dative bonds, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:703: WARNING: duplicate label stereochemistry, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:1432: WARNING: duplicate label chemical features, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2634: WARNING: duplicate label introduction, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Cookbook.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2732: WARNING: duplicate label rdkit fingerprints, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedInPython.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:2844: WARNING: duplicate label representation, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst [autosectionlabel.RDKit_Book]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/RDKit_Book.rst:3100: WARNING: duplicate label license, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/Overview.md [autosectionlabel.RDKit_Book]
WARNING: autodoc: failed to import 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Avalon' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Avalon.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.rst [autosectionlabel.source/rdkit.Avalon]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Avalon.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.rst [autosectionlabel.source/rdkit.Avalon]
WARNING: autodoc: failed to import 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst:5: WARNING: duplicate label subpackages, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.rst [autosectionlabel.source/rdkit.Chem]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst:28: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Avalon.rst [autosectionlabel.source/rdkit.Chem]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst:120: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Avalon.rst [autosectionlabel.source/rdkit.Chem]
WARNING: autodoc: failed to import 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.AtomPairs.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst [autosectionlabel.source/rdkit.Chem.AtomPairs]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.AtomPairs.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst [autosectionlabel.source/rdkit.Chem.AtomPairs]
WARNING: autodoc: failed to import 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.ChemUtils.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.AtomPairs.rst [autosectionlabel.source/rdkit.Chem.ChemUtils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.ChemUtils.rst:16: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.AtomPairs.rst [autosectionlabel.source/rdkit.Chem.ChemUtils]
WARNING: autodoc: failed to import 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Draw' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Draw.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.ChemUtils.rst [autosectionlabel.source/rdkit.Chem.Draw]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Draw.rst:16: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.ChemUtils.rst [autosectionlabel.source/rdkit.Chem.Draw]
WARNING: autodoc: failed to import 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Draw.rdMolDraw2DQt' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EState' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.EState.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Draw.rst [autosectionlabel.source/rdkit.Chem.EState]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.EState.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Draw.rst [autosectionlabel.source/rdkit.Chem.EState]
WARNING: autodoc: failed to import 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.FeatMaps.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.EState.rst [autosectionlabel.source/rdkit.Chem.FeatMaps]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.FeatMaps.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.EState.rst [autosectionlabel.source/rdkit.Chem.FeatMaps]
WARNING: autodoc: failed to import 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Features' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Features.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.FeatMaps.rst [autosectionlabel.source/rdkit.Chem.Features]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Features.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.FeatMaps.rst [autosectionlabel.source/rdkit.Chem.Features]
WARNING: autodoc: failed to import 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fingerprints.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Features.rst [autosectionlabel.source/rdkit.Chem.Fingerprints]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fingerprints.rst:16: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Features.rst [autosectionlabel.source/rdkit.Chem.Fingerprints]
WARNING: autodoc: failed to import 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fraggle.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fingerprints.rst [autosectionlabel.source/rdkit.Chem.Fraggle]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fraggle.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fingerprints.rst [autosectionlabel.source/rdkit.Chem.Fraggle]
WARNING: autodoc: failed to import 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolDb.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fraggle.rst [autosectionlabel.source/rdkit.Chem.MolDb]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolDb.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Fraggle.rst [autosectionlabel.source/rdkit.Chem.MolDb]
WARNING: autodoc: failed to import 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolKey.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolDb.rst [autosectionlabel.source/rdkit.Chem.MolKey]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolKey.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolDb.rst [autosectionlabel.source/rdkit.Chem.MolKey]
WARNING: autodoc: failed to import 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolStandardize.rst:6: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolKey.rst [autosectionlabel.source/rdkit.Chem.MolStandardize]
WARNING: autodoc: failed to import 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm2D.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolStandardize.rst [autosectionlabel.source/rdkit.Chem.Pharm2D]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm2D.rst:16: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.MolKey.rst [autosectionlabel.source/rdkit.Chem.Pharm2D]
WARNING: autodoc: failed to import 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm3D.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm2D.rst [autosectionlabel.source/rdkit.Chem.Pharm3D]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm3D.rst:14: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm2D.rst [autosectionlabel.source/rdkit.Chem.Pharm3D]
WARNING: autodoc: failed to import 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.QED' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Recap' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.RegistrationHash' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Scaffolds.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm3D.rst [autosectionlabel.source/rdkit.Chem.Scaffolds]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Scaffolds.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Pharm3D.rst [autosectionlabel.source/rdkit.Chem.Scaffolds]
WARNING: autodoc: failed to import 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Scaffolds.rdScaffoldNetwork' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Scaffolds.rst [autosectionlabel.source/rdkit.Chem.SimpleEnum]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Scaffolds.rst [autosectionlabel.source/rdkit.Chem.SimpleEnum]
WARNING: autodoc: failed to import 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.SpacialScore' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Subshape.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.SimpleEnum.rst [autosectionlabel.source/rdkit.Chem.Subshape]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Subshape.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.SimpleEnum.rst [autosectionlabel.source/rdkit.Chem.Subshape]
WARNING: autodoc: failed to import 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Suppliers.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Subshape.rst [autosectionlabel.source/rdkit.Chem.Suppliers]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Suppliers.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Subshape.rst [autosectionlabel.source/rdkit.Chem.Suppliers]
WARNING: autodoc: failed to import 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.fmcs.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Suppliers.rst [autosectionlabel.source/rdkit.Chem.fmcs]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.fmcs.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.Suppliers.rst [autosectionlabel.source/rdkit.Chem.fmcs]
WARNING: autodoc: failed to import 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.inchi' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdAbbreviations' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdCIPLabeler' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdDeprotect' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdDetermineBonds' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdEHTTools' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdEnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdGeneralizedSubstruct' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMHFPFingerprint' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMIF' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolEnumerator' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolProcessing' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdRascalMCES' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdShapeAlign' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdSynthonSpaceSearch' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdTautomerQuery' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataManip' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.rst:5: WARNING: duplicate label subpackages, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.rst [autosectionlabel.source/rdkit.DataManip]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.fmcs.rst [autosectionlabel.source/rdkit.DataManip]
WARNING: autodoc: failed to import 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.Metric.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Chem.fmcs.rst [autosectionlabel.source/rdkit.DataManip.Metric]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.Metric.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.rst [autosectionlabel.source/rdkit.DataManip.Metric]
WARNING: autodoc: failed to import 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataStructs.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.Metric.rst [autosectionlabel.source/rdkit.DataStructs]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataStructs.rst:18: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.Metric.rst [autosectionlabel.source/rdkit.DataStructs]
WARNING: autodoc: failed to import 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Dbase.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataStructs.rst [autosectionlabel.source/rdkit.Dbase]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Dbase.rst:17: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataStructs.rst [autosectionlabel.source/rdkit.Dbase]
WARNING: autodoc: failed to import 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DistanceGeometry.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Dbase.rst [autosectionlabel.source/rdkit.DistanceGeometry]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DistanceGeometry.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Dbase.rst [autosectionlabel.source/rdkit.DistanceGeometry]
WARNING: autodoc: failed to import 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils]
WARNING: autodoc: failed to import 'ForceField' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ForceField.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DistanceGeometry.rst [autosectionlabel.source/rdkit.ForceField]
WARNING: autodoc: failed to import 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Geometry' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Geometry.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DistanceGeometry.rst [autosectionlabel.source/rdkit.Geometry]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Geometry.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ForceField.rst [autosectionlabel.source/rdkit.Geometry]
WARNING: autodoc: failed to import 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst:5: WARNING: duplicate label subpackages, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.DataManip.rst [autosectionlabel.source/rdkit.ML]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst:18: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Geometry.rst [autosectionlabel.source/rdkit.ML]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst:26: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Geometry.rst [autosectionlabel.source/rdkit.ML]
WARNING: autodoc: failed to import 'ML.Cluster' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Cluster.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst [autosectionlabel.source/rdkit.ML.Cluster]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Cluster.rst:19: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst [autosectionlabel.source/rdkit.ML.Cluster]
WARNING: autodoc: failed to import 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Data.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Cluster.rst [autosectionlabel.source/rdkit.ML.Data]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Data.rst:19: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Cluster.rst [autosectionlabel.source/rdkit.ML.Data]
WARNING: autodoc: failed to import 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Data.cQuantize' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Descriptors.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Data.rst [autosectionlabel.source/rdkit.ML.Descriptors]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Descriptors.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Data.rst [autosectionlabel.source/rdkit.ML.Descriptors]
WARNING: autodoc: failed to import 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.InfoTheory.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Descriptors.rst [autosectionlabel.source/rdkit.ML.InfoTheory]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.InfoTheory.rst:15: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Descriptors.rst [autosectionlabel.source/rdkit.ML.InfoTheory]
WARNING: autodoc: failed to import 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.MLUtils.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.InfoTheory.rst [autosectionlabel.source/rdkit.ML.MLUtils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.MLUtils.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.InfoTheory.rst [autosectionlabel.source/rdkit.ML.MLUtils]
WARNING: autodoc: failed to import 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.MatOps' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.SLT' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.SLT.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.MLUtils.rst [autosectionlabel.source/rdkit.ML.SLT]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.SLT.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.MLUtils.rst [autosectionlabel.source/rdkit.ML.SLT]
WARNING: autodoc: failed to import 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.Scoring' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Scoring.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.SLT.rst [autosectionlabel.source/rdkit.ML.Scoring]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Scoring.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.SLT.rst [autosectionlabel.source/rdkit.ML.Scoring]
WARNING: autodoc: failed to import 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'ML.files' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'Numerics' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Numerics.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Scoring.rst [autosectionlabel.source/rdkit.Numerics]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Numerics.rst:12: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.Scoring.rst [autosectionlabel.source/rdkit.Numerics]
WARNING: autodoc: failed to import 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'RDConfig' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'RDLogger' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'RDPaths' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'RDRandom' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'SimDivFilters' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.SimDivFilters.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Numerics.rst [autosectionlabel.source/rdkit.SimDivFilters]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.SimDivFilters.rst:13: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.Numerics.rst [autosectionlabel.source/rdkit.SimDivFilters]
WARNING: autodoc: failed to import 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'TestRunner' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.rst:5: WARNING: duplicate label subpackages, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.ML.rst [autosectionlabel.source/rdkit.VLib]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.rst:12: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.SimDivFilters.rst [autosectionlabel.source/rdkit.VLib]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.rst:23: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.SimDivFilters.rst [autosectionlabel.source/rdkit.VLib]
WARNING: autodoc: failed to import 'VLib.Filter' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.Node' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.NodeLib.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.rst [autosectionlabel.source/rdkit.VLib.NodeLib]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.NodeLib.rst:19: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.rst [autosectionlabel.source/rdkit.VLib.NodeLib]
WARNING: autodoc: failed to import 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.Output' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.Supply' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'VLib.Transform' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'rdBase' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'utils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.utils.rst:5: WARNING: duplicate label submodules, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.NodeLib.rst [autosectionlabel.source/rdkit.utils]
/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.utils.rst:16: WARNING: duplicate label module contents, other instance in /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/source/rdkit.VLib.NodeLib.rst [autosectionlabel.source/rdkit.utils]
WARNING: autodoc: failed to import 'utils.cactvs' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'utils.chemutils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'utils.fileutils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'utils.listutils' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
WARNING: autodoc: failed to import 'utils.spiral' from module 'rdkit'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path
    module = _import_module(module_name, try_reload=True)
  File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 218, in _import_module
    raise ModuleNotFoundError(msg, name=modname)  # NoQA: TRY301
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'rdkit'
 [autodoc.import_object]
looking for now-outdated files... none found
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checking consistency... /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/data/README.md: WARNING: document isn't included in any toctree [toc.not_included]
done
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/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/GettingStartedWithContributing.md:284: WARNING: 'myst' cross-reference target not found: 'building-rdkit-for-development' [myst.xref_missing]
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dumping search index in English (code: en)... done
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build succeeded, 391 warnings.

The HTML pages are in _build/html.

Build finished. The HTML pages are in _build/html.
make[2]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book'
# latexpdf build fails due to https://github.com/rdkit/rdkit/issues/8850
# (cd /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book; RDBASE=/build/rdkit-binaries-forky-amd64/rdkit-202603.4 /usr/bin/make latexpdf)
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh: command-omitted: The call to "dh_auto_test -O--buildsystem=cmake" was omitted due to "DEB_BUILD_OPTIONS=nocheck"
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=cmake
   dh_prep -O--buildsystem=cmake
   dh_installdirs -O--buildsystem=cmake
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_auto_install
	cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp AM_UPDATE_INFO_DIR=no INSTALL="install --strip-program=true"
make[2]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/rdkit-binaries-forky-amd64/rdkit-202603.4 -B/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
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Install the project...
/usr/bin/cmake -P cmake_install.cmake
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/MLData.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/Quantize.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/Transforms.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/files.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/conftest.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/DbUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/DbInfo.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/DbConnection.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/DbModule.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Qt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Qt/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/examples
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS/pidPS.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/README
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/pid.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/SVG
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/SVG/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/util
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/util/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/pagesizes.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/colors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/TK
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/TK/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/TK/pidTK.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/patches
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/stringformat.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Pyart
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/utils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/tests
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/tests/pstests.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/tests/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/tests/pidtest.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/tests/testallps.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/ReportLab
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/WX
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/WX/pidWX.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/WX/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AllChem.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState/EState.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/nbtests
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/nbtests/github4823.ipynb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/nbtests/rdkit-structure-renderer.ipynb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/nbtests/ChEMBL_quinolones.tsv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fragments.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/fmcs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fraggle
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolStandardize
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/PandasTools.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MCS.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Crippen.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/QED.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Graphs.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm3D
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/DSViewer.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolCatalog.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolSurf.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/PyMol.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Features
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Features/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Suppliers
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/demoCombined.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/PropertyMol.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/RegistrationHash.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/BRICS.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Recap.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/PandasPatcher.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Scaffolds
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Scaffolds/ScaffoldNetwork.ipynb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Randomize.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ShowMols.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SATIS.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SimpleEnum
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/inchi.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Lipinski.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/InteractiveRenderer.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SpacialScore.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/SaltRemover.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolKey
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Descriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/RDConfig.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/Supply.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/Output.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/Node.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/Filter.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/VLib/Transform.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataManip
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataManip/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataManip/Metric
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Numerics
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Numerics/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DistanceGeometry
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/spiral.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/fileutils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/chemutils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/chemdraw.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/retest.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/listutils.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/utils/cactvs.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Avalon
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Avalon/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/font_dumper.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/Amadeus.ttf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/Telex-Regular.ttf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/telex_font_license.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/amadeus_font_license.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/Fonts/roboto_regular_license.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book_jp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_oh1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im6.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_39_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atrop_example4.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/mcs_example_3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_32_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/query_atoms.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_7.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/query_bonds.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molE.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_38_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_oh2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_5.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/substruct_search_parameters1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_ex2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/mcs_example_5.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/style.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_annotation_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_36_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atrop_example2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molC.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_37_im2.svg
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atrop_representation1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/reaction1_highlight.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/parastereo_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_missing1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_15_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atrop_example3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_40_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_34_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_labels_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_13_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/mcs_example_6.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_9.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_34_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/pull_req2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_17_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_40_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.jpg
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/atrop_example1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_sp1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molD.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/ary_group.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molG.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_8_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_2_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/potential_stereo_double_bond3.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_33_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_ex1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/reaction1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_19_im0.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/mcs_example_1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/query_bonds.2.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_30_im1.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/README.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/AmideBond.rxn
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/test_multi_colours.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/DnaTest3.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/CrossLink.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example17.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example4.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example8.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedWithContributing.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/gsocGeneralFileReader.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/CIPLabeling.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Code/SGroups.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Analysis
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/examples/chembl24_structs_randomtestSample_100_out.csv
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/PBF
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/AKI.png
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/JVE.png
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-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/6c83.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/3w2c_N15.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_N15_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/1C9_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/JVE_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_SKE_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_ACP_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_3w2p_1C9_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_AKI_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/3m11_AKI.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/SKE_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/SKE_crystal_aligned_1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_crystal_aligned_1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/AKI_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/4uzh_JVE.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/BEG_test.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/5dpv.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_JVE_pH74_netcharge1.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/1d4i_BEG.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_crystal_aligned_2.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/aurka_protein_2c6e.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/lig_crystal_aligned.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/crystal_aligned.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/5dt0.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/4i24_1C9.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/N15_renamed.pdb
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/SA_Score/build_sascore_db.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/pytest.ini
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/UnitTestDbCLI.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/patch_rdkit_docstrings
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/patch_rdkit_docstrings/__main__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/patch_rdkit_docstrings/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/patch_rdkit_docstrings/clang_worker.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/__init__.pyi.diff
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/rdchem.pyi.diff
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/inchi.pyi.diff
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/__main__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/__init__.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/gen_rdkit_stubs/worker.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Scripts/test.sh
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/README.md
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDInchiLib.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDInchiLib.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDInchiLib.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/inchi.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdinchi.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/CoordGen.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdCoordGen.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitga.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitga.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitga.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/ControlCHandler.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/RDExportMacros.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/ConcurrentQueue.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/BetterEnums.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/enum.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/extensions.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash_fwd.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/float_functions.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/hash_float.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDBoost/pyint_api.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/rdBase.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDStreams.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDStreams.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDStreams.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/RDStreams/streams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/RealValueVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/UniformRealValueGrid3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAlignment.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt_SVE.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Numerics/Conrec.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceField.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/AngleConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/AngleConstraints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/DistanceConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/DistanceConstraints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/PositionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/TorsionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Utils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ForceField/rdForceField.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Atropisomers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SubstanceGroup.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Subset.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/CanonicalizeStereoGroups.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesJSONParsers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDepictor.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdDepictor.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMarvinParser.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMarvinParser.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMarvinParser.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MarvinParse/MarvinParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/CDXMLParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileWriters.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.v1API.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/GeneralFileReader.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedMolSupplier.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedSDMolSupplier.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/PNGParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGenericGroups.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGenericGroups.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGenericGroups.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/GenericGroups/GenericGroups.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/Enumerate.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateBase.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/CartesianProduct.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSample.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenterJSONParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTautomerQuery.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTautomerQuery.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTautomerQuery.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/TautomerQuery/TautomerQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdTautomerQuery.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/BCUT.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AtomFeat.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/OxidationNumbers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/DCLV.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/EEM.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/PBF.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/PMI.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR3D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RDF.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MORSE.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/GETAWAY.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/WHIM.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/CoulombMat.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MHFP.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMHFPFingerprint.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleContribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/PlanarityContribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitO3AAlign.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitO3AAlign.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitO3AAlign.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGaussianShape.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGaussianShape.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGaussianShape.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GaussianShape.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ShapeInput.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ShapeOverlayOptions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdGaussianShape.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DJS.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DHelpers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DCairo.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFMCS.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdFMCS.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolHash.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolHash.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMMPA.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMMPA.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRascalMCES.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRascalMCES.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRascalMCES.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RascalMCES/RascalMCES.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RascalMCES/RascalOptions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RascalMCES/RascalClusterOptions.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RascalMCES/RascalResult.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdRascalMCES.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSynthonSpaceSearch.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSynthonSpaceSearch.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSpace.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSet.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/Synthon.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SearchResults.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSpaceSearcher.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSpaceSubstructureSearcher.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSpaceFingerprintSearcher.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SynthonSpaceSearch/SynthonSpaceRascalSearcher.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdSynthonSpaceSearch.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEnumerateStereoisomers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEnumerateStereoisomers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitEnumerateStereoisomers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/EnumerateStereoisomers/EnumerateStereoisomers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/EnumerateStereoisomers/Flippers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdEnumerateStereoisomers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCIPLabeler.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCIPLabeler.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitCIPLabeler.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/CIPLabeler/CIPLabeler.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/CIPLabeler/TooManyNodesException.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdCIPLabeler.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDeprotect.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDeprotect.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDeprotect.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Deprotect/Deprotect.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdDeprotect.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/PatternFactory.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecompParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecompJSONParsers.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDetermineBonds.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDetermineBonds.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitDetermineBonds.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/DetermineBonds/DetermineBonds.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdDetermineBonds.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdchem.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdmolops.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdqueries.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Pipeline.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/ScaffoldNetwork/ScaffoldNetwork.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolEnumerator.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolEnumerator.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolEnumerator.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolEnumerator/MolEnumerator.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolEnumerator/LinkNode.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolEnumerator.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAbbreviations.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAbbreviations.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitAbbreviations.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/Abbreviations/Abbreviations.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdAbbreviations.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGeneralizedSubstruct.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitGeneralizedSubstruct.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/GeneralizedSubstruct/XQMol.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdGeneralizedSubstruct.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolProcessing.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolProcessing.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolProcessing.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolProcessing/MolProcessing.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMolProcessing.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInteractionFields.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInteractionFields.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitMolInteractionFields.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/GraphMol/MolInteractionFields/MIFDescriptors.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdMIF.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/NullQueryAlgebra.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/SimDivPickers/LeaderPicker.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKithc.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2026.03.4
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/Chem/rdChemicalFeatures.so

=====================================================================
PostgreSQL cartridge installation succeeded.
=====================================================================
Restart the PostgreSQL service before using the PostgreSQL
RDKit cartridge.
=====================================================================

-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages/rdkit/RDPaths.py
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkitpython/rdkitpython-targets.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkitpython/rdkitpython-targets-none.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkitpython/rdkitpython-config.cmake
-- Installing: /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/cmake/rdkitpython/rdkitpython-config-version.cmake
make[2]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4/obj-x86_64-linux-gnu'
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   debian/rules override_dh_install
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
mkdir -p /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3
mv /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14/site-packages /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3/dist-packages
rm -f -rf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3.14
ln -sf /usr/share/fonts/truetype/freefont/FreeSans.ttf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
dh_install -ppython3-rdkit /usr/lib/python3
rm -f -rf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/lib/python3/dist-packages/rdkit/docs/
rm -f -rf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/__pycache__
rm -f -rf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/tmp/usr/share/RDKit/Projects/DbCLI/__pycache__
dh_numpy3
Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68.
Can't stat debian/librdkit1t64: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/librdkit-dev: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-10-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-11-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-12-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-13-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-14-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-15-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-16-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-17-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
Can't stat debian/postgresql-18-rdkit: No such file or directory
 at /usr/bin/dh_numpy3 line 86.
dh_numpy3: skipping binary package librdkit1t64 which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package librdkit-dev which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-10-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-11-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-12-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-13-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-14-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-15-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-16-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-17-rdkit which does not depend on the NumPy C ABI
dh_numpy3: skipping binary package postgresql-18-rdkit which does not depend on the NumPy C ABI
dh_install
for v in $(pg_buildext supported-versions); do \
	mkdir -p debian/postgresql-$v-rdkit/usr/lib/postgresql/$v/lib/ debian/postgresql-$v-rdkit/usr/share/postgresql/$v/extension/; \
	cp Code/PgSQL/rdkit/build-$v/librdkit.so debian/postgresql-$v-rdkit/usr/lib/postgresql/$v/lib/rdkit.so; \
	cp Code/PgSQL/rdkit/build-$v/rdkit*.sql debian/postgresql-$v-rdkit/usr/share/postgresql/$v/extension/; \
	cp Code/PgSQL/rdkit/build-$v/update_sql/rdkit*.sql debian/postgresql-$v-rdkit/usr/share/postgresql/$v/extension/; \
	cp Code/PgSQL/rdkit/rdkit.control debian/postgresql-$v-rdkit/usr/share/postgresql/$v/extension/; \
done
mkdir -p /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit/
# cp /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/_build/latex/RDKit.pdf /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /build/rdkit-binaries-forky-amd64/rdkit-202603.4/Docs/Book/_build/html /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit/
ln -sf /usr/share/javascript/jquery/jquery.js /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit//html/cppapi/jquery.js
ln -sf /usr/share/javascript/jquery/jquery.js /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/jquery.js
ln -sf /usr/share/javascript/underscore/underscore.js /build/rdkit-binaries-forky-amd64/rdkit-202603.4/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/underscore.js
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   dh_installdocs -O--buildsystem=cmake
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   debian/rules override_dh_python3
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_python3 -ppython3-rdkit
I: dh_python3 fs:507: renaming rdBase.so to rdBase.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdForceField.so to rdForceField.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdSimDivPickers.so to rdSimDivPickers.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdGeometry.so to rdGeometry.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming Clustering.so to Clustering.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming cQuantize.so to cQuantize.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdInfoTheory.so to rdInfoTheory.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdAbbreviations.so to rdAbbreviations.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdCIPLabeler.so to rdCIPLabeler.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdChemReactions.so to rdChemReactions.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdChemicalFeatures.so to rdChemicalFeatures.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdCoordGen.so to rdCoordGen.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdDepictor.so to rdDepictor.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdDeprotect.so to rdDeprotect.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdDetermineBonds.so to rdDetermineBonds.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdDistGeom.so to rdDistGeom.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdEnumerateStereoisomers.so to rdEnumerateStereoisomers.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdFMCS.so to rdFMCS.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdGaussianShape.so to rdGaussianShape.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdGeneralizedSubstruct.so to rdGeneralizedSubstruct.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMHFPFingerprint.so to rdMHFPFingerprint.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMIF.so to rdMIF.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMMPA.so to rdMMPA.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolAlign.so to rdMolAlign.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolCatalog.so to rdMolCatalog.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolDescriptors.so to rdMolDescriptors.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolEnumerator.so to rdMolEnumerator.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolHash.so to rdMolHash.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolInterchange.so to rdMolInterchange.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolProcessing.so to rdMolProcessing.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolTransforms.so to rdMolTransforms.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdPartialCharges.so to rdPartialCharges.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdRascalMCES.so to rdRascalMCES.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdReducedGraphs.so to rdReducedGraphs.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdSLNParse.so to rdSLNParse.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdShapeHelpers.so to rdShapeHelpers.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdSubstructLibrary.so to rdSubstructLibrary.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdSynthonSpaceSearch.so to rdSynthonSpaceSearch.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdTautomerQuery.so to rdTautomerQuery.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdchem.so to rdchem.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdfiltercatalog.so to rdfiltercatalog.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdfragcatalog.so to rdfragcatalog.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdinchi.so to rdinchi.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdmolfiles.so to rdmolfiles.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdmolops.so to rdmolops.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdqueries.so to rdqueries.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdtrajectory.so to rdtrajectory.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolStandardize.so to rdMolStandardize.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdScaffoldNetwork.so to rdScaffoldNetwork.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMolDraw2D.so to rdMolDraw2D.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming cDataStructs.so to cDataStructs.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming rdAlignment.so to rdAlignment.cpython-314-x86_64-linux-gnu.so
I: dh_python3 fs:507: renaming DistGeom.so to DistGeom.cpython-314-x86_64-linux-gnu.so
dh_numpy3 -ppython3-rdkit
Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68.
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   dh_installsystemduser -O--buildsystem=cmake
   dh_lintian -O--buildsystem=cmake
   dh_perl -O--buildsystem=cmake
   dh_link -O--buildsystem=cmake
   dh_strip_nondeterminism -O--buildsystem=cmake
   dh_compress -O--buildsystem=cmake
   dh_fixperms -O--buildsystem=cmake
   debian/rules override_dh_missing
make[1]: Entering directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
dh_missing --list-missing
dh_missing: warning: usr/lib/postgresql/18/lib/rdkit.so exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example1.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example10.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example11.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example12.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example13.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example14.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example15.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example16.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example17.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example2.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example3.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example4.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example5.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example6.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example7.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example8.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example9.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Cookbook.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedWithContributing.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Overview.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/AmideBond.rxn exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/CrossLink.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/DnaTest3.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.smi exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/cdk2.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/chiral.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/input.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/invalid.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.test.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.train.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/test_multi_colours.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/exts/extapi.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/Cc1ccccc1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/DnaDoubleStrand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molA.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molB.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molC.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molD.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molE.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molF.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molG.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/PeptideConversion.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_0_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_0_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_0_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_13_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_13_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_15_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_15_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_17_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_17_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_19_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_20_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_20_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_22_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_22_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_23_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_23_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_28_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_28_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_29_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_2_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_2_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_30_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_30_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_32_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_32_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_33_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_33_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_33_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_34_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_34_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_34_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_35_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_36_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_36_im1.png exists in debian/tmp but is not installed to anywhere 
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dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/terminology_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/CIPLabeling.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/EnhancedStereo.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/SGroups.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/gsocGeneralFileReader.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GA.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-Tests.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/__init__.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/__main__.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/__init__.pyi.diff exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/inchi.pyi.diff exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/patch/rdkit/Chem/rdchem.pyi.diff exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/gen_rdkit_stubs/worker.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/patch_rdkit_docstrings/__init__.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/patch_rdkit_docstrings/__main__.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/patch_rdkit_docstrings/clang_worker.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/test.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--3.8--4.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.0--4.0.1.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.0.1--4.1.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.1--4.1.1.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.1.1--4.2.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.2--4.3.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.3.0--4.4.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.4.0--4.5.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.5.0--4.6.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.6.0--4.6.1.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.6.1--4.7.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.7.0--4.8.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit--4.8.0.sql exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/postgresql/18/extension/rdkit.control exists in debian/tmp but is not installed to anywhere 
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (67), librdkit1t64 (130), postgresql-10-rdkit (0), postgresql-11-rdkit (0), postgresql-12-rdkit (0), postgresql-13-rdkit (0), postgresql-14-rdkit (0), postgresql-15-rdkit (0), postgresql-16-rdkit (0), postgresql-17-rdkit (0), postgresql-18-rdkit (0), python3-rdkit (1), rdkit-data (3), rdkit-doc (0)
	 * dh_installdocs: librdkit-dev (0), librdkit1t64 (0), postgresql-10-rdkit (0), postgresql-11-rdkit (0), postgresql-12-rdkit (0), postgresql-13-rdkit (0), postgresql-14-rdkit (0), postgresql-15-rdkit (0), postgresql-16-rdkit (0), postgresql-17-rdkit (0), postgresql-18-rdkit (0), python3-rdkit (0), rdkit-data (0), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	If the omission is intentional or no other helper can take care of this consider adding the
	paths to debian/not-installed.
make[1]: Leaving directory '/build/rdkit-binaries-forky-amd64/rdkit-202603.4'
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/rdkit.so contains an unresolvable reference to symbol elog_finish: it is probably a plugin
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-14-rdkit/usr/lib/postgresql/14/lib/rdkit.so contains an unresolvable reference to symbol MemoryContextAlloc: it is probably a plugin
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/rdkit.so contains an unresolvable reference to symbol pg_detoast_datum: it is probably a plugin
dpkg-shlibdeps: warning: debian/postgresql-17-rdkit/usr/lib/postgresql/17/lib/rdkit.so contains an unresolvable reference to symbol MemoryContextAllocZero: it is probably a plugin
dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-15-rdkit/usr/lib/postgresql/15/lib/rdkit.so contains an unresolvable reference to symbol palloc: it is probably a plugin
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib64/ld-linux-x86-64.so.2
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/rdkit.so contains an unresolvable reference to symbol DefineCustomBoolVariable: it is probably a plugin
dpkg-shlibdeps: warning: debian/postgresql-10-rdkit/usr/lib/postgresql/10/lib/rdkit.so contains an unresolvable reference to symbol MemoryContextRegisterResetCallback: it is probably a plugin
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-18-rdkit/usr/lib/postgresql/18/lib/rdkit.so contains an unresolvable reference to symbol byteain: it is probably a plugin
dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/rdkit.so contains an unresolvable reference to symbol errstart: it is probably a plugin
dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib64/ld-linux-x86-64.so.2
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged
dpkg-shlibdeps: warning: symbol PyLong_FromLong used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyExc_ValueError used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyUnicode_FromStringAndSize used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyErr_Format used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyObject_Size used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol PyObject_HasAttrString used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/librdkit1t64/usr/lib/libRDKitRDBoost.so.1.2026.03.4 found in none of the libraries
dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all)
   dh_installdeb -O--buildsystem=cmake
   dh_gencontrol -O--buildsystem=cmake
dpkg-gencontrol: warning: Provides field of package python3-rdkit: substitution variable ${python3:Provides} used, but is not defined
dpkg-gencontrol: warning: Depends field of package rdkit-doc: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-11-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Depends field of package rdkit-data: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-12-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-10-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-14-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-13-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-16-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-15-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-17-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-18-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Provides field of package python3-rdkit: substitution variable ${python3:Provides} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-14-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-17-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-18-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-12-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-11-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-13-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-16-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-10-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
dpkg-gencontrol: warning: Breaks field of package postgresql-15-rdkit: substitution variable ${postgresql:Breaks} used, but is not defined
   dh_md5sums -O--buildsystem=cmake
   dh_builddeb -O--buildsystem=cmake
dpkg-deb: building package 'python3-rdkit' in '../python3-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'rdkit-doc' in '../rdkit-doc_202603.4-1.pgdg14+1_all.deb'.
dpkg-deb: building package 'librdkit1t64' in '../librdkit1t64_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-10-rdkit-dbgsym' in '../postgresql-10-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-11-rdkit-dbgsym' in '../postgresql-11-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-12-rdkit-dbgsym' in '../postgresql-12-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-13-rdkit-dbgsym' in '../postgresql-13-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-14-rdkit-dbgsym' in '../postgresql-14-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-15-rdkit-dbgsym' in '../postgresql-15-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-16-rdkit-dbgsym' in '../postgresql-16-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-18-rdkit-dbgsym' in '../postgresql-18-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-17-rdkit-dbgsym' in '../postgresql-17-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-12-rdkit' in '../postgresql-12-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-16-rdkit' in '../postgresql-16-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-15-rdkit' in '../postgresql-15-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-18-rdkit' in '../postgresql-18-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-13-rdkit' in '../postgresql-13-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-14-rdkit' in '../postgresql-14-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-17-rdkit' in '../postgresql-17-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-11-rdkit' in '../postgresql-11-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'postgresql-10-rdkit' in '../postgresql-10-rdkit_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'rdkit-data' in '../rdkit-data_202603.4-1.pgdg14+1_all.deb'.
dpkg-deb: building package 'python3-rdkit-dbgsym' in '../python3-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
dpkg-deb: building package 'librdkit1t64-dbgsym' in '../librdkit1t64-dbgsym_202603.4-1.pgdg14+1_amd64.deb'.
 dpkg-genbuildinfo --build=binary -O../rdkit_202603.4-1.pgdg14+1_amd64.buildinfo
 dpkg-genchanges --build=binary -O../rdkit_202603.4-1.pgdg14+1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2026-08-15T20:19:08Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                      Sat, 15 Aug 2026 20:19:09 +0000 |
+------------------------------------------------------------------------------+


rdkit_202603.4-1.pgdg14+1_amd64.changes:
----------------------------------------

Format: 1.8
Date: Wed, 29 Jul 2026 00:09:39 +0200
Source: rdkit
Binary: librdkit-dev librdkit1t64 librdkit1t64-dbgsym postgresql-10-rdkit postgresql-10-rdkit-dbgsym postgresql-11-rdkit postgresql-11-rdkit-dbgsym postgresql-12-rdkit postgresql-12-rdkit-dbgsym postgresql-13-rdkit postgresql-13-rdkit-dbgsym postgresql-14-rdkit postgresql-14-rdkit-dbgsym postgresql-15-rdkit postgresql-15-rdkit-dbgsym postgresql-16-rdkit postgresql-16-rdkit-dbgsym postgresql-17-rdkit postgresql-17-rdkit-dbgsym postgresql-18-rdkit postgresql-18-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym rdkit-data rdkit-doc
Built-For-Profiles: pgdg forky
Architecture: amd64 all
Version: 202603.4-1.pgdg14+1
Distribution: forky-pgdg
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: PostgreSQL on Debian and Ubuntu <pgsql-pkg-debian@lists.postgresql.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1t64 - Collection of cheminformatics and machine-learning software (shar
 postgresql-10-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-11-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-12-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-13-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-14-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-15-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-16-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-17-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 postgresql-18-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python3-rdkit - Collection of cheminformatics and machine-learning software
 rdkit-data - Collection of cheminformatics and machine-learning software (data
 rdkit-doc  - Collection of cheminformatics and machine-learning software (docu
Changes:
 rdkit (202603.4-1.pgdg14+1) forky-pgdg; urgency=medium
 .
   * Rebuild for forky-pgdg.
   * No source changes.
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Files:
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+------------------------------------------------------------------------------+
| Buildinfo                                    Sat, 15 Aug 2026 20:19:09 +0000 |
+------------------------------------------------------------------------------+

Format: 1.0
Source: rdkit
Binary: librdkit-dev librdkit1t64 librdkit1t64-dbgsym postgresql-10-rdkit postgresql-10-rdkit-dbgsym postgresql-11-rdkit postgresql-11-rdkit-dbgsym postgresql-12-rdkit postgresql-12-rdkit-dbgsym postgresql-13-rdkit postgresql-13-rdkit-dbgsym postgresql-14-rdkit postgresql-14-rdkit-dbgsym postgresql-15-rdkit postgresql-15-rdkit-dbgsym postgresql-16-rdkit postgresql-16-rdkit-dbgsym postgresql-17-rdkit postgresql-17-rdkit-dbgsym postgresql-18-rdkit postgresql-18-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym rdkit-data rdkit-doc
Architecture: all amd64
Version: 202603.4-1.pgdg14+1
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Sat, 15 Aug 2026 20:19:06 +0000
Build-Path: /build/rdkit-binaries-forky-amd64/rdkit-202603.4
Installed-Build-Depends:
 adduser (= 3.158),
 architecture-properties (= 0.2.6+b2),
 autoconf (= 2.73-2),
 automake (= 1:1.18.1-4),
 autopoint (= 1.0-3),
 autotools-dev (= 20240727.1+nmu1),
 base-files (= 14.2),
 base-passwd (= 3.6.8),
 bash (= 5.3-3+b1),
 binutils (= 2.47-2),
 binutils-common (= 2.47-2),
 binutils-x86-64-linux-gnu (= 2.47-2),
 bison (= 2:3.8.2+dfsg-1+b3),
 bsdextrautils (= 2.42.2-2),
 bubblewrap (= 0.11.2-2),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6+b2),
 ca-certificates (= 20260601),
 catch2 (= 3.7.1-0.6),
 clang-21 (= 1:21.1.8-10),
 cmake (= 4.3.4-1),
 coreutils (= 9.10-1),
 cpp (= 4:15.2.0-5),
 cpp-15 (= 15.3.0-2),
 cpp-15-x86-64-linux-gnu (= 15.3.0-2),
 cpp-x86-64-linux-gnu (= 4:15.2.0-5),
 dash (= 0.5.12-12),
 debconf (= 1.5.92),
 debhelper (= 14.3),
 debianutils (= 5.23.2),
 dh-autoreconf (= 22),
 dh-python (= 7.20260623),
 dh-strip-nondeterminism (= 1.15.1-1),
 diffutils (= 1:3.12-1),
 docutils-common (= 0.22.4+dfsg-1),
 doxygen (= 1.15.0+ds1-1.1),
 dpkg (= 1.23.7),
 dpkg-dev (= 1.23.7),
 dwz (= 0.17-1),
 file (= 1:5.47-4),
 findutils (= 4.11.0-2),
 flex (= 2.6.4-8.2+b5),
 fontconfig (= 2.17.1-5),
 fontconfig-config (= 2.17.1-5),
 fonts-dejavu-core (= 2.37-9),
 fonts-dejavu-mono (= 2.37-9),
 fonts-lmodern (= 2.005-2),
 g++ (= 4:15.2.0-5),
 g++-15 (= 15.3.0-2),
 g++-15-x86-64-linux-gnu (= 15.3.0-2),
 g++-x86-64-linux-gnu (= 4:15.2.0-5),
 gcc (= 4:15.2.0-5),
 gcc-15 (= 15.3.0-2),
 gcc-15-base (= 15.3.0-2),
 gcc-15-x86-64-linux-gnu (= 15.3.0-2),
 gcc-16-base (= 16.2.0-1),
 gcc-x86-64-linux-gnu (= 4:15.2.0-5),
 gettext (= 1.0-3),
 gettext-base (= 1.0-3),
 girepository-tools (= 2.88.3-2),
 glycin-loaders (= 2.1.5+ds-2),
 glycin-thumbnailers (= 2.1.5+ds-2),
 grep (= 3.12-1),
 groff-base (= 1.24.1-1),
 gzip (= 1.13-1),
 hicolor-icon-theme (= 0.18-2),
 hostname (= 3.25),
 imagemagick (= 8:7.1.2.27+dfsg1-1+b1),
 imagemagick-7-common (= 8:7.1.2.27+dfsg1-1),
 imagemagick-7.q16 (= 8:7.1.2.27+dfsg1-1+b1),
 init-system-helpers (= 1.69),
 intltool-debian (= 0.35.0+20060710.6),
 latexmk (= 1:4.88~ds-1),
 libabsl20260526 (= 20260526.0-2),
 libacl1 (= 2.4.0-1),
 libaom3 (= 3.14.1-1),
 libapache-pom-java (= 33-2),
 libarchive-zip-perl (= 1.68-1),
 libarchive13t64 (= 3.8.9-1),
 libasan8 (= 16.2.0-1),
 libatomic1 (= 16.2.0-1),
 libattr1 (= 1:2.6.0-1),
 libaudit-common (= 1:4.1.2-1),
 libaudit1 (= 1:4.1.2-1+b1),
 libavif16 (= 1.4.2-1),
 libbinutils (= 2.47-2),
 libblas3 (= 3.12.1-8),
 libblkid-dev (= 2.42.2-2),
 libblkid1 (= 2.42.2-2),
 libboost-atomic1.90-dev (= 1.90.0-6),
 libboost-atomic1.90.0 (= 1.90.0-6),
 libboost-chrono1.90-dev (= 1.90.0-6),
 libboost-chrono1.90.0 (= 1.90.0-6),
 libboost-container1.90-dev (= 1.90.0-6),
 libboost-container1.90.0 (= 1.90.0-6),
 libboost-date-time1.90-dev (= 1.90.0-6),
 libboost-date-time1.90.0 (= 1.90.0-6),
 libboost-dev (= 1.90.0.2),
 libboost-exception1.90-dev (= 1.90.0-6),
 libboost-graph1.90-dev (= 1.90.0-6),
 libboost-graph1.90.0 (= 1.90.0-6),
 libboost-iostreams-dev (= 1.90.0.2),
 libboost-iostreams1.90-dev (= 1.90.0-6),
 libboost-iostreams1.90.0 (= 1.90.0-6),
 libboost-numpy-dev (= 1.90.0.2),
 libboost-numpy1.90-dev (= 1.90.0-6),
 libboost-numpy1.90.0 (= 1.90.0-6),
 libboost-program-options-dev (= 1.90.0.2),
 libboost-program-options1.90-dev (= 1.90.0-6),
 libboost-program-options1.90.0 (= 1.90.0-6),
 libboost-python-dev (= 1.90.0.2),
 libboost-python1.90-dev (= 1.90.0-6),
 libboost-python1.90.0 (= 1.90.0-6),
 libboost-random1.90-dev (= 1.90.0-6),
 libboost-random1.90.0 (= 1.90.0-6),
 libboost-regex-dev (= 1.90.0.2),
 libboost-regex1.90-dev (= 1.90.0-6),
 libboost-regex1.90.0 (= 1.90.0-6),
 libboost-serialization1.90-dev (= 1.90.0-6),
 libboost-serialization1.90.0 (= 1.90.0-6),
 libboost-test1.90-dev (= 1.90.0-6),
 libboost-test1.90.0 (= 1.90.0-6),
 libboost-thread-dev (= 1.90.0.2),
 libboost-thread1.90-dev (= 1.90.0-6),
 libboost-thread1.90.0 (= 1.90.0-6),
 libboost1.90-dev (= 1.90.0-6),
 libbrotli-dev (= 1.2.0-3),
 libbrotli1 (= 1.2.0-3),
 libbsd0 (= 0.12.2-3),
 libbz2-1.0 (= 1.0.8-6+b2),
 libbz2-dev (= 1.0.8-6+b2),
 libc-bin (= 2.42-17),
 libc-dev-bin (= 2.42-17),
 libc-gconv-modules-extra (= 2.42-17),
 libc6 (= 2.42-17),
 libc6-dev (= 2.42-17),
 libcairo-gobject2 (= 1.18.4-3+b1),
 libcairo-script-interpreter2 (= 1.18.4-3+b1),
 libcairo2 (= 1.18.4-3+b1),
 libcairo2-dev (= 1.18.4-3+b1),
 libcap-ng0 (= 0.9.3-1+b1),
 libcap2 (= 1:2.78-1),
 libcatch2-dev (= 3.7.1-0.6+b1),
 libcc1-0 (= 16.2.0-1),
 libclang-common-21-dev (= 1:21.1.8-10),
 libclang-cpp21 (= 1:21.1.8-10),
 libclang1-21 (= 1:21.1.8-10),
 libcom-err2 (= 1.47.4-1),
 libcommons-logging-java (= 1.3.0-2),
 libcommons-parent-java (= 56-1),
 libcoordgen-dev (= 3.0.2-4),
 libcoordgen3 (= 3.0.2-4),
 libcrypt1 (= 1:4.5.2+20251210-1),
 libctf-nobfd0 (= 2.47-2),
 libctf0 (= 2.47-2),
 libcurl4t64 (= 8.21.0-2),
 libdatrie1 (= 0.2.14-2),
 libdav1d7 (= 1.5.4-1),
 libdb5.3t64 (= 5.3.28+dfsg2-11+b1),
 libde265-0 (= 1.1.1-1),
 libdebconfclient0 (= 0.283),
 libdebhelper-perl (= 14.3),
 libdeflate0 (= 1.25-1),
 libdpkg-perl (= 1.23.7),
 libedit2 (= 3.1-20260512-1),
 libeigen3-dev (= 3.4.0-5),
 libelf1t64 (= 0.195-1),
 libexpat1 (= 2.8.2-1),
 libexpat1-dev (= 2.8.2-1),
 libffi-dev (= 3.7.1-2),
 libffi8 (= 3.7.1-2),
 libfftw3-double3 (= 3.3.11-1),
 libfile-stripnondeterminism-perl (= 1.15.1-1),
 libfmt10 (= 10.1.1+ds1-4+b2),
 libfontbox-java (= 1:1.8.16-5),
 libfontconfig-dev (= 2.17.1-5),
 libfontconfig1 (= 2.17.1-5),
 libfontenc1 (= 1:1.1.8-1+b3),
 libfreetype-dev (= 2.14.3+dfsg-2),
 libfreetype6 (= 2.14.3+dfsg-2),
 libfribidi0 (= 1.0.16-5+b1),
 libgav1-2 (= 0.20.0-2+b2),
 libgc1 (= 1:8.2.12-1),
 libgcc-15-dev (= 15.3.0-2),
 libgcc-s1 (= 16.2.0-1),
 libgdbm-compat4t64 (= 1.26-1+b2),
 libgdbm6t64 (= 1.26-1+b2),
 libgdk-pixbuf-2.0-0 (= 2.44.7+dfsg-1),
 libgdk-pixbuf2.0-common (= 2.44.7+dfsg-1),
 libgfortran5 (= 16.2.0-1),
 libgio-2.0-dev (= 2.88.3-2),
 libgio-2.0-dev-bin (= 2.88.3-2),
 libgirepository-2.0-0 (= 2.88.3-2),
 libglib2.0-0t64 (= 2.88.3-2),
 libglib2.0-bin (= 2.88.3-2),
 libglib2.0-data (= 2.88.3-2),
 libglib2.0-dev (= 2.88.3-2),
 libglib2.0-dev-bin (= 2.88.3-2),
 libglycin-2-0 (= 2.1.5+ds-2),
 libgmp10 (= 2:6.3.0+dfsg-5+b2),
 libgomp1 (= 16.2.0-1),
 libgprofng0 (= 2.47-2),
 libgraphite2-3 (= 1.3.15-2),
 libgssapi-krb5-2 (= 1.22.1-3),
 libharfbuzz-subset0 (= 12.3.2-2+b2),
 libharfbuzz0b (= 12.3.2-2+b2),
 libheif-plugin-dav1d (= 1.23.1-1),
 libheif-plugin-libde265 (= 1.23.1-1),
 libheif1 (= 1.23.1-1),
 libhwasan0 (= 16.2.0-1),
 libhwy1t64 (= 1.3.0-2+b1),
 libice-dev (= 2:1.1.1-1+b2),
 libice6 (= 2:1.1.1-1+b2),
 libicu78 (= 78.3-2),
 libidn2-0 (= 2.3.8-5),
 libimagequant0 (= 4.4.1-1+b2),
 libinchi-dev (= 1.07.3+dfsg-2),
 libinchi1.07 (= 1.07.3+dfsg-2),
 libio-pty-perl (= 1:1.31-1+b1),
 libipc-run-perl (= 20260402.0-1),
 libisl23 (= 0.28-1),
 libitm1 (= 16.2.0-1),
 libjansson4 (= 2.15.1-1),
 libjbig0 (= 2.1-6.1+b3),
 libjpeg62-turbo (= 1:3.1.3-4),
 libjs-sphinxdoc (= 9.1.0-6),
 libjson-perl (= 4.10000-1),
 libjsoncpp26 (= 1.9.8-2),
 libjxl0.11 (= 0.11.2-5),
 libk5crypto3 (= 1.22.1-3),
 libkeyutils1 (= 1.6.3-6+b2),
 libkpathsea6 (= 2026.20260303.78225+ds-4),
 libkrb5-3 (= 1.22.1-3),
 libkrb5support0 (= 1.22.1-3),
 liblapack3 (= 3.12.1-8),
 liblcms2-2 (= 2.19.1-1),
 libldap2 (= 2.6.13+dfsg-1+b1),
 liblerc4 (= 4.2.0+ds-1),
 libllvm21 (= 1:21.1.8-10),
 liblqr-1-0 (= 0.4.2-2.2+b1),
 liblsan0 (= 16.2.0-1),
 libltdl7 (= 2.5.4-11),
 liblua5.4-0 (= 5.4.8-2),
 liblz4-1 (= 1.10.0-10),
 liblzma-dev (= 5.8.3-1),
 liblzma5 (= 5.8.3-1),
 liblzo2-2 (= 2.10-3+b2),
 libmaeparser-dev (= 1.3.3-4+b1),
 libmaeparser1 (= 1.3.3-4+b1),
 libmagic-mgc (= 1:5.47-4),
 libmagic1t64 (= 1:5.47-4),
 libmagickcore-7.q16-10 (= 8:7.1.2.27+dfsg1-1+b1),
 libmagickwand-7.q16-10 (= 8:7.1.2.27+dfsg1-1+b1),
 libmd0 (= 1.2.0-2),
 libmount-dev (= 2.42.2-2),
 libmount1 (= 2.42.2-2),
 libmpc3 (= 1.3.1-3),
 libmpfi0 (= 1.5.4+ds-5),
 libmpfr6 (= 4.2.2-3),
 libncurses-dev (= 6.6+20260608-2),
 libncurses6 (= 6.6+20260608-2),
 libncursesw6 (= 6.6+20260608-2),
 libnettle8t64 (= 3.10.2-1+b1),
 libnghttp2-14 (= 1.70.0-1),
 libnghttp3-9 (= 1.17.0-1),
 libngtcp2-16 (= 1.24.0-1),
 libngtcp2-crypto-ossl0 (= 1.24.0-1),
 libnuma1 (= 2.0.19-1+b2),
 libobjc-15-dev (= 15.3.0-2),
 libobjc4 (= 16.2.0-1),
 libopenjp2-7 (= 2.5.4-1.1),
 libpam-modules (= 1.7.0-8),
 libpam-modules-bin (= 1.7.0-8),
 libpam-runtime (= 1.7.0-8),
 libpam0g (= 1.7.0-8),
 libpango-1.0-0 (= 1.58.0-1),
 libpangocairo-1.0-0 (= 1.58.0-1),
 libpangoft2-1.0-0 (= 1.58.0-1),
 libpaper-utils (= 2.2.5-0.4),
 libpaper2 (= 2.2.5-0.4),
 libpcre2-16-0 (= 10.46-1+b2),
 libpcre2-32-0 (= 10.46-1+b2),
 libpcre2-8-0 (= 10.46-1+b2),
 libpcre2-dev (= 10.46-1+b2),
 libpcre2-posix3 (= 10.46-1+b2),
 libpdfbox-java (= 1:1.8.16-5),
 libperl5.42 (= 5.42.2-3),
 libpfm4 (= 4.13.0+git106-g3e4031b-1+b2),
 libpipeline1 (= 1.5.8-3),
 libpixman-1-0 (= 0.46.4-1+b2),
 libpixman-1-dev (= 0.46.4-1+b2),
 libpkgconf7 (= 2.5.1-4),
 libpng-dev (= 1.6.58-1),
 libpng16-16t64 (= 1.6.58-1),
 libpotrace0 (= 1.16-2+b3),
 libpq-dev (= 18.6-2.pgdg14+1),
 libpq5 (= 18.6-2.pgdg14+1),
 libproc2-1 (= 2:4.0.6-3),
 libpsl5t64 (= 0.23.1-1),
 libptexenc1 (= 2026.20260303.78225+ds-4),
 libpython3-dev (= 3.14.6-1),
 libpython3-stdlib (= 3.14.6-1),
 libpython3.14 (= 3.14.6-1),
 libpython3.14-dev (= 3.14.6-1),
 libpython3.14-minimal (= 3.14.6-1),
 libpython3.14-stdlib (= 3.14.6-1),
 libquadmath0 (= 16.2.0-1),
 libraqm0 (= 0.10.5-1),
 librav1e0.8 (= 0.8.1-11),
 libraw25 (= 0.22.1-1),
 libreadline8t64 (= 8.3-4),
 librhash1 (= 1.4.6-1.1+b1),
 librsvg2-2 (= 2.62.1+dfsg-1),
 librsvg2-bin (= 2.62.1+dfsg-1),
 libsasl2-2 (= 2.1.28+dfsg1-11),
 libsasl2-modules-db (= 2.1.28+dfsg1-11),
 libseccomp2 (= 2.6.1-1),
 libselinux-dev (= 3.11-2),
 libselinux1 (= 3.11-2),
 libsemanage-common (= 3.11-1),
 libsemanage2 (= 3.11-1),
 libsepol-dev (= 3.11-1),
 libsepol2 (= 3.11-1),
 libsframe3 (= 2.47-2),
 libsharpyuv0 (= 1.5.0-0.1+b2),
 libsm-dev (= 2:1.2.6-1+b2),
 libsm6 (= 2:1.2.6-1+b2),
 libsmartcols1 (= 2.42.2-2),
 libspdlog1.15 (= 1:1.15.3+ds-1+b2),
 libsqlite3-0 (= 3.53.4-2),
 libsqlite3-dev (= 3.53.4-2),
 libssh2-1t64 (= 1.11.1-5),
 libssl-dev (= 3.6.3-1),
 libssl3t64 (= 3.6.3-1),
 libstdc++-15-dev (= 15.3.0-2),
 libstdc++6 (= 16.2.0-1),
 libsvtav1enc4 (= 4.1.0+dfsg-1),
 libsynctex2 (= 2026.20260303.78225+ds-4),
 libsysprof-capture-4-dev (= 50.0-3),
 libsystemd-shared (= 261.2-1),
 libsystemd0 (= 261.2-1),
 libteckit0 (= 2.5.13+ds-2),
 libtexlua53-5 (= 2026.20260303.78225+ds-4),
 libtext-charwidth-perl (= 0.04-12+b1),
 libtext-wrapi18n-perl (= 0.06-11),
 libthai-data (= 0.1.30-3),
 libthai0 (= 0.1.30-3),
 libtiff6 (= 4.7.2-1),
 libtinfo6 (= 6.6+20260608-2),
 libtool (= 2.5.4-11),
 libtsan2 (= 16.2.0-1),
 libubsan1 (= 16.2.0-1),
 libuchardet0 (= 0.0.8-2+b2),
 libudev1 (= 261.2-1),
 libunistring5 (= 1.4.2-1),
 libuuid1 (= 2.42.2-2),
 libuv1t64 (= 1.52.1-4),
 libwebp7 (= 1.5.0-0.1+b2),
 libwebpdemux2 (= 1.5.0-0.1+b2),
 libwebpmux3 (= 1.5.0-0.1+b2),
 libx11-6 (= 2:1.8.13-1),
 libx11-data (= 2:1.8.13-1),
 libx11-dev (= 2:1.8.13-1),
 libxapian30 (= 1.4.31-2),
 libxau-dev (= 1:1.0.11-1+b2),
 libxau6 (= 1:1.0.11-1+b2),
 libxaw7 (= 2:1.0.16-1+b2),
 libxcb-render0 (= 1.17.0-2+b2),
 libxcb-render0-dev (= 1.17.0-2+b2),
 libxcb-shm0 (= 1.17.0-2+b2),
 libxcb-shm0-dev (= 1.17.0-2+b2),
 libxcb1 (= 1.17.0-2+b2),
 libxcb1-dev (= 1.17.0-2+b2),
 libxdmcp-dev (= 1:1.1.5-2+b1),
 libxdmcp6 (= 1:1.1.5-2+b1),
 libxext-dev (= 2:1.3.4-1+b4),
 libxext6 (= 2:1.3.4-1+b4),
 libxi6 (= 2:1.8.2-2+b1),
 libxml2-16 (= 2.15.3+dfsg-1),
 libxml2-dev (= 2.15.3+dfsg-1),
 libxmu6 (= 2:1.1.3-4+b1),
 libxpm4 (= 1:3.5.19-1),
 libxrender-dev (= 1:0.9.12-1+b2),
 libxrender1 (= 1:0.9.12-1+b2),
 libxt6t64 (= 1:1.2.1-1.3+b2),
 libxxhash0 (= 0.8.3-2+b2),
 libyaml-0-2 (= 0.2.5-2+b1),
 libyuv0 (= 0.0.1949.20260706-1),
 libz3-4 (= 4.13.3-1.1),
 libz3-dev (= 4.13.3-1.1),
 libzstd1 (= 1.5.7+dfsg-4),
 libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2+b1),
 linux-libc-dev (= 7.1.7-1),
 llvm-21 (= 1:21.1.8-10),
 llvm-21-dev (= 1:21.1.8-10),
 llvm-21-linker-tools (= 1:21.1.8-10),
 llvm-21-runtime (= 1:21.1.8-10),
 llvm-21-tools (= 1:21.1.8-10),
 login.defs (= 1:4.19.3-2),
 m4 (= 1.4.21-1),
 make (= 4.4.1-3),
 man-db (= 2.13.1-1),
 mawk (= 1.3.4.20260302-1),
 media-types (= 14.0.0),
 native-architecture (= 0.2.6),
 ncurses-base (= 6.6+20260608-2),
 ncurses-bin (= 6.6+20260608-2),
 netbase (= 6.5),
 openssl (= 3.6.3-1),
 openssl-provider-legacy (= 3.6.3-1),
 pandoc (= 3.10-1),
 pandoc-data (= 3.10-1),
 passwd (= 1:4.19.3-2),
 patch (= 2.8-2),
 perl (= 5.42.2-3),
 perl-base (= 5.42.2-3),
 perl-modules-5.42 (= 5.42.2-3),
 pkgconf (= 2.5.1-4),
 pkgconf-bin (= 2.5.1-4),
 po-debconf (= 1.0.22),
 postgresql-client-10 (= 10.23-9.pgdg14+4),
 postgresql-client-11 (= 11.22-10.pgdg14+4),
 postgresql-client-12 (= 12.22-4.pgdg14+3),
 postgresql-client-13 (= 13.23-2.pgdg14+3),
 postgresql-client-14 (= 14.24-1.pgdg14+2),
 postgresql-client-15 (= 15.19-1.pgdg14+2),
 postgresql-client-16 (= 16.15-1.pgdg14+2),
 postgresql-client-17 (= 17.11-1.pgdg14+2),
 postgresql-client-18 (= 18.6-2.pgdg14+1),
 postgresql-client-common (= 294~20260813.2048.gb11c0d8.pgdg14+1),
 postgresql-common (= 294~20260813.2048.gb11c0d8.pgdg14+1),
 postgresql-common-dev (= 294~20260813.2048.gb11c0d8.pgdg14+1),
 postgresql-server-dev-10 (= 10.23-9.pgdg14+4),
 postgresql-server-dev-11 (= 11.22-10.pgdg14+4),
 postgresql-server-dev-12 (= 12.22-4.pgdg14+3),
 postgresql-server-dev-13 (= 13.23-2.pgdg14+3),
 postgresql-server-dev-14 (= 14.24-1.pgdg14+2),
 postgresql-server-dev-15 (= 15.19-1.pgdg14+2),
 postgresql-server-dev-16 (= 16.15-1.pgdg14+2),
 postgresql-server-dev-17 (= 17.11-1.pgdg14+2),
 postgresql-server-dev-18 (= 18.6-2.pgdg14+1),
 postgresql-server-dev-all (= 294~20260813.2048.gb11c0d8.pgdg14+1),
 preview-latex-style (= 13.2-1.1),
 procps (= 2:4.0.6-3),
 python-babel-localedata (= 2.17.0-2),
 python3 (= 3.14.6-1),
 python3-alabaster (= 1.0.0-1),
 python3-babel (= 2.17.0-2),
 python3-certifi (= 2026.7.22+ds-1),
 python3-chardet (= 5.2.0+dfsg-2),
 python3-charset-normalizer (= 3.4.7-2),
 python3-commonmark (= 0.9.1-8),
 python3-dateutil (= 2.9.0-5),
 python3-defusedxml (= 0.7.1-3),
 python3-dev (= 3.14.6-1),
 python3-docutils (= 0.22.4+dfsg-1),
 python3-greenlet (= 3.3.2-4),
 python3-idna (= 3.18-1),
 python3-imagesize (= 2.0.0-1),
 python3-iniconfig (= 2.1.0-2),
 python3-jinja2 (= 3.1.6-3),
 python3-linkify-it (= 2.1.0-2),
 python3-markdown-it (= 4.2.0-3),
 python3-markupsafe (= 3.0.3-2),
 python3-mdit-py-plugins (= 0.6.1-1),
 python3-mdurl (= 0.1.2-1),
 python3-minimal (= 3.14.6-1),
 python3-myst-parser (= 5.1.0-2),
 python3-numpy (= 1:2.4.6+ds-4),
 python3-numpy-dev (= 1:2.4.6+ds-4),
 python3-packaging (= 26.2-2),
 python3-pandas (= 2.3.3+dfsg-3),
 python3-pandas-lib (= 2.3.3+dfsg-3+b1),
 python3-pil (= 12.3.0-1),
 python3-pluggy (= 1.6.0-2),
 python3-pygments (= 2.20.0+dfsg-2),
 python3-pytest (= 9.1.1-1),
 python3-pytz (= 2025.2-7),
 python3-recommonmark (= 0.7.1+ds-9),
 python3-requests (= 2.32.5+dfsg-2),
 python3-roman-numerals (= 4.1.0-1),
 python3-snowballstemmer (= 3.1.1-1),
 python3-sphinx (= 9.1.0-6),
 python3-sqlalchemy (= 2.0.48+ds1-1),
 python3-typing-extensions (= 4.16.0-4),
 python3-uc-micro (= 2.0.0-1),
 python3-urllib3 (= 2.7.0-3),
 python3-yaml (= 6.0.3-1),
 python3.14 (= 3.14.6-1),
 python3.14-dev (= 3.14.6-1),
 python3.14-minimal (= 3.14.6-1),
 rapidjson-dev (= 1.1.0+dfsg2-7.6),
 readline-common (= 8.3-4),
 rpcsvc-proto (= 1.4.4-1),
 sed (= 4.9-3),
 sensible-utils (= 0.0.26),
 sgml-base (= 1.31+nmu1),
 shared-mime-info (= 2.4-5+b3),
 sphinx-common (= 9.1.0-6),
 ssl-cert (= 1.2.0),
 systemd (= 261.2-1),
 sysvinit-utils (= 3.18-1),
 t1utils (= 1.41-4),
 tar (= 1.35+dfsg-5),
 tex-common (= 6.20),
 tex-gyre (= 20180621-8),
 texlive-base (= 2026.20260711-2),
 texlive-binaries (= 2026.20260303.78225+ds-4),
 texlive-fonts-recommended (= 2026.20260711-2),
 texlive-latex-base (= 2026.20260711-2),
 texlive-latex-extra (= 2026.20260711-2),
 texlive-latex-recommended (= 2026.20260711-2),
 texlive-pictures (= 2026.20260711-2),
 tzdata (= 2026c-1),
 ucf (= 3.0056),
 util-linux (= 2.42.2-2),
 uuid-dev (= 2.42.2-2),
 x11-common (= 1:7.7+26),
 x11proto-dev (= 2025.1-1),
 xdg-utils (= 1.2.1-2),
 xfonts-encodings (= 1:1.0.4-2.2),
 xfonts-utils (= 1:7.7+7),
 xml-core (= 0.21),
 xorg-sgml-doctools (= 1:1.12.1-1),
 xtrans-dev (= 1.6.0-1),
 xz-utils (= 5.8.3-1),
 zlib1g (= 1:1.3.dfsg+really1.3.2-3),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3)
Environment:
 DEB_BUILD_OPTIONS="nocheck parallel=16"
 DEB_BUILD_PROFILES="pgdg forky"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 SOURCE_DATE_EPOCH="1785276579"


+------------------------------------------------------------------------------+
| Package contents                             Sat, 15 Aug 2026 20:19:09 +0000 |
+------------------------------------------------------------------------------+


librdkit-dev_202603.4-1.pgdg14+1_amd64.deb
------------------------------------------

 new Debian package, version 2.0.
 size 518468 bytes: control archive=11100 bytes.
    1523 bytes,    37 lines      control
   32566 bytes,   382 lines      md5sums
 Package: librdkit-dev
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 2899
 Depends: librdkit1t64 (= 202603.4-1.pgdg14+1)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     15921 2026-07-09 14:44 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1364 2026-07-09 14:44 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1243 2026-07-09 14:44 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1052 2026-07-09 14:44 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2936 2026-07-09 14:44 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1867 2026-07-09 14:44 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3524 2026-07-09 14:44 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     11910 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1120 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       897 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root      2775 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-rw-r--r-- root/root       872 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4395 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3480 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9516 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7562 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      4117 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/RealValueVect.h
-rw-r--r-- root/root      3477 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/SparseBitVect.h
-rw-r--r-- root/root     16947 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/SparseIntVect.h
-rw-r--r-- root/root      1296 2026-07-09 14:44 ./usr/include/rdkit/DataStructs/base64.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/DistGeom/
-rw-r--r-- root/root      3205 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/BoundsMatrix.h
-rw-r--r-- root/root      2001 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/ChiralSet.h
-rw-r--r-- root/root      2964 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/ChiralViolationContribs.h
-rw-r--r-- root/root     11690 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/DistGeomUtils.h
-rw-r--r-- root/root      2194 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/DistViolationContribs.h
-rw-r--r-- root/root      2507 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/FourthDimContribs.h
-rw-r--r-- root/root      1310 2026-07-09 14:44 ./usr/include/rdkit/DistGeom/TriangleSmooth.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/Features/
-rw-r--r-- root/root      2898 2026-07-09 14:44 ./usr/include/rdkit/Features/Feature.h
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/ForceField/
-rw-r--r-- root/root      2174 2026-07-09 14:44 ./usr/include/rdkit/ForceField/AngleConstraint.h
-rw-r--r-- root/root      4181 2026-07-09 14:44 ./usr/include/rdkit/ForceField/AngleConstraints.h
-rw-r--r-- root/root      1116 2026-07-09 14:44 ./usr/include/rdkit/ForceField/Contrib.h
-rw-r--r-- root/root      1917 2026-07-09 14:44 ./usr/include/rdkit/ForceField/DistanceConstraint.h
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/include/rdkit/RDGeneral/hash/
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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitChemicalFeatures.so -> libRDKitChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitDataStructs.so -> libRDKitDataStructs.so.1
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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitDetermineBonds.so -> libRDKitDetermineBonds.so.1
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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMarvinParser.so -> libRDKitMarvinParser.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolEnumerator.so -> libRDKitMolEnumerator.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolInteractionFields.so -> libRDKitMolInteractionFields.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolProcessing.so -> libRDKitMolProcessing.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolTransforms.so -> libRDKitMolTransforms.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitO3AAlign.so -> libRDKitO3AAlign.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDInchiLib.so -> libRDKitRDInchiLib.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDStreams.so -> libRDKitRDStreams.so.1
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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRascalMCES.so -> libRDKitRascalMCES.so.1
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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitScaffoldNetwork.so -> libRDKitScaffoldNetwork.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSynthonSpaceSearch.so -> libRDKitSynthonSpaceSearch.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitTautomerQuery.so -> libRDKitTautomerQuery.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitga.so -> libRDKitga.so.1
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/librdkit-dev/
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librdkit1t64-dbgsym_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 137263396 bytes: control archive=3520 bytes.
    3016 bytes,    12 lines      control
    6979 bytes,    66 lines      md5sums
 Package: librdkit1t64-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 139914
 Depends: librdkit1t64 (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1t64
 Build-Ids: 0656a28b373174549eb6024fa94c9eaece3929bd 0de97f8e6437b8f9997d16945547a63410fb749e 0edb420ad0960e2108fde1bac56aacf5a53372dd 11a01f9b802ac9c084ecdbcd6ea69371493366b3 11aa1c37b645780b78d7e1719a76b16cccb2fba5 12c67a1875921ff4c5502adf4b71a5810e5ba46d 1ec3a0380bf5ce1a81965f05551108512c197512 273d730bcddd3a8cec90bf2148663969717a9bca 28fe33ac4acc3c89be9a97eab3e5a6f90e1183d3 29a5bfd19df9258187f0b977077223c244c67066 2fa9d187a93a499f2504e715666078c0f6470108 30d59436081014816d860e55fcd8a070989137f2 30dd1b3c33da1dd1d617b863730dbf6c6a3fdd91 322e759985e68310dee8f215032c3936103b1079 3bae786844bfa2b9bb28d6507aa86ba661888d38 407d63c21411dc57a7ee7f93fd19c51b2afec4cf 4459e86ffad6a804886b258e080017f133048398 45803f05abc2f71dfed484ff57560ca635151e6e 47dba7649a50f220a422aebdab0e31df1b1aecd3 484a43c332fb8540281f3bdce71153e33093297a 4b2a6c596f2940e5e7909a2754741fb3d739e0ed 4dad1dc7f1ae201ff0438ad8abb073d8cf55b1d5 5498faf5c67297bfbb8cb4baa563ca71d1df71e2 5e31d69154b96df47dff588458f89ef754bb244b 6af871310370cecc3aad1a29c576328dd35104ae 714e67cc5b9f927ef3e3b341f96a64bd4630a1c2 7690a02a06e604316a809f25170bb6efa64d0e6b 76d78673cd261c6e9c56ea05a4b3872504dfcaa0 778ed7882cd539e4ab43120bc18f0de4222d0990 784dba3b861cd289bb8928e880f57c3c638e0f20 7a1fecb547f2eea03d7a48da60547c75570441a6 7c993d437fbff934ef364709b840cb6e954e478a 7e5e454903bdbd65092b36d63f87b354ac4154d7 7ef18b4f4d76ffad12d71ae307075632f6cb8ccd 827fb95185be83c8285fa6a9ba18ac56b425df70 8b541e7e17a9d23b1bf76896ddc8820970ab7fd5 9103b57100f3bc32c5a191955ee2cb2dafbfdd33 99b5668ce9e78304ae9e39c4830fe5a618e5256d 9a023e9e9853aa82cac2b557e8c3c3e1e29c4133 9e78709d70e31b63b246f981a9c396d76ae8cd9b 9fd07abf9caab770e10e5b423f12a71be17170c4 a26f5eec2edbc9627916ccbf9b5c79f9e789237b ac8a99c2a2ae88f3518a3751b787689c05f53c80 aebbad98b7390d4b5d6a92fdfa247d5458281c0e b51971d5944be49ef3edb37aa80a978021ba6d37 b9117d13ff4300a240586ac154b3ecf20af41f40 b9bf8c90c7969c93767fda618c14a02c236a4aee be5ceca0dec6f31022e1f092d9d8070be3be586d be630a6c22bbc966b6b1eae44aa40d0d986eff26 c1df382e1ae9699d11dc81bdc72fbfcfd42988ac cb633dcaf8abe6134dc39cc6250668b67aa5936a cd4383bc8a892a497630497bdc2e398ce442e6b5 d092741e0c0aa7f6eb0735c26d39c5c701a20de0 d4512c5450b05f162f22b9f9043ba17f74afcfd3 d561285c2a5ea275c0074b836d648401efbd23d1 e0585cf43f8d3a5fc29e500c4c7394397191139f e1910362f97ab20f3f95feade35dae52433e5520 e1e29d6f2e304b600ba0efbb2c00e216dd944be7 e8e4410bc42f5f4cfed3730a8428cffcb5fbbed4 f0aeea0e0acad7b4d32d6b006425b95ce85c420e f41a3b0f7849c04e07760df91db61353f3dd19b5 f61bb9211fb864e0ddc876bdd27a5aa6a4c3ace8 f66733eac67f9c0cedecf3e94b04d92d1aa3009b f8993d7052138e3d02b8e0bb70a03ba561fc30a0 fb364d6d69dfd251ad29304eee04c62d7663e77e

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librdkit1t64_202603.4-1.pgdg14+1_amd64.deb
------------------------------------------

 new Debian package, version 2.0.
 size 6559632 bytes: control archive=3600 bytes.
    1948 bytes,    40 lines      control
    5350 bytes,    69 lines      md5sums
    3229 bytes,    65 lines      shlibs
      65 bytes,     2 lines      triggers
 Package: librdkit1t64
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 27214
 Depends: libboost-iostreams1.90.0 (>= 1.90.0), libboost-python1.90.0 (>= 1.90.0), libboost-python1.90.0-py314, libboost-serialization1.90.0 (>= 1.90.0), libc6 (>= 2.38), libcairo2 (>= 1.4.10), libcoordgen3 (>= 3.0.2), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.4), libinchi1.07 (>= 1.07.3+dfsg), libmaeparser1 (>= 1.3.3), libstdc++6 (>= 14)
 Breaks: coot (<< 1.1.15+dfsg-1), librdkit1 (<< 202603.4-1.pgdg14+1)
 Replaces: librdkit1
 Provides: librdkit1 (= 202603.4-1.pgdg14+1)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

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lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitFMCS.so.1 -> libRDKitFMCS.so.1.2026.03.4
-rw-r--r-- root/root    362656 2026-07-28 22:09 ./usr/lib/libRDKitFMCS.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitFileParsers.so.1 -> libRDKitFileParsers.so.1.2026.03.4
-rw-r--r-- root/root   2470576 2026-07-28 22:09 ./usr/lib/libRDKitFileParsers.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitFilterCatalog.so.1 -> libRDKitFilterCatalog.so.1.2026.03.4
-rw-r--r-- root/root   1128688 2026-07-28 22:09 ./usr/lib/libRDKitFilterCatalog.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitFingerprints.so.1 -> libRDKitFingerprints.so.1.2026.03.4
-rw-r--r-- root/root    892208 2026-07-28 22:09 ./usr/lib/libRDKitFingerprints.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitForceField.so.1 -> libRDKitForceField.so.1.2026.03.4
-rw-r--r-- root/root    743592 2026-07-28 22:09 ./usr/lib/libRDKitForceField.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitForceFieldHelpers.so.1 -> libRDKitForceFieldHelpers.so.1.2026.03.4
-rw-r--r-- root/root    538808 2026-07-28 22:09 ./usr/lib/libRDKitForceFieldHelpers.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitFragCatalog.so.1 -> libRDKitFragCatalog.so.1.2026.03.4
-rw-r--r-- root/root    239784 2026-07-28 22:09 ./usr/lib/libRDKitFragCatalog.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitGaussianShape.so.1 -> libRDKitGaussianShape.so.1.2026.03.4
-rw-r--r-- root/root    608432 2026-07-28 22:09 ./usr/lib/libRDKitGaussianShape.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitGeneralizedSubstruct.so.1 -> libRDKitGeneralizedSubstruct.so.1.2026.03.4
-rw-r--r-- root/root    284960 2026-07-28 22:09 ./usr/lib/libRDKitGeneralizedSubstruct.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitGenericGroups.so.1 -> libRDKitGenericGroups.so.1.2026.03.4
-rw-r--r-- root/root    166064 2026-07-28 22:09 ./usr/lib/libRDKitGenericGroups.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2026.03.4
-rw-r--r-- root/root   2488552 2026-07-28 22:09 ./usr/lib/libRDKitGraphMol.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2026.03.4
-rw-r--r-- root/root     47264 2026-07-28 22:09 ./usr/lib/libRDKitInfoTheory.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2026.03.4
-rw-r--r-- root/root     96424 2026-07-28 22:09 ./usr/lib/libRDKitMMPA.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMarvinParser.so.1 -> libRDKitMarvinParser.so.1.2026.03.4
-rw-r--r-- root/root    776400 2026-07-28 22:09 ./usr/lib/libRDKitMarvinParser.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2026.03.4
-rw-r--r-- root/root    190664 2026-07-28 22:09 ./usr/lib/libRDKitMolAlign.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2026.03.4
-rw-r--r-- root/root     51360 2026-07-28 22:09 ./usr/lib/libRDKitMolCatalog.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2026.03.4
-rw-r--r-- root/root    161976 2026-07-28 22:09 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2026.03.4
-rw-r--r-- root/root   1322088 2026-07-28 22:09 ./usr/lib/libRDKitMolDraw2D.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolEnumerator.so.1 -> libRDKitMolEnumerator.so.1.2026.03.4
-rw-r--r-- root/root    371056 2026-07-28 22:09 ./usr/lib/libRDKitMolEnumerator.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2026.03.4
-rw-r--r-- root/root    117168 2026-07-28 22:09 ./usr/lib/libRDKitMolHash.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolInteractionFields.so.1 -> libRDKitMolInteractionFields.so.1.2026.03.4
-rw-r--r-- root/root    161968 2026-07-28 22:09 ./usr/lib/libRDKitMolInteractionFields.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolInterchange.so.1 -> libRDKitMolInterchange.so.1.2026.03.4
-rw-r--r-- root/root    940528 2026-07-28 22:09 ./usr/lib/libRDKitMolInterchange.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolProcessing.so.1 -> libRDKitMolProcessing.so.1.2026.03.4
-rw-r--r-- root/root     59680 2026-07-28 22:09 ./usr/lib/libRDKitMolProcessing.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2026.03.4
-rw-r--r-- root/root   1187160 2026-07-28 22:09 ./usr/lib/libRDKitMolStandardize.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2026.03.4
-rw-r--r-- root/root    129184 2026-07-28 22:09 ./usr/lib/libRDKitMolTransforms.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitO3AAlign.so.1 -> libRDKitO3AAlign.so.1.2026.03.4
-rw-r--r-- root/root    190640 2026-07-28 22:09 ./usr/lib/libRDKitO3AAlign.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2026.03.4
-rw-r--r-- root/root     14112 2026-07-28 22:09 ./usr/lib/libRDKitOptimizer.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2026.03.4
-rw-r--r-- root/root     84128 2026-07-28 22:09 ./usr/lib/libRDKitPartialCharges.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2026.03.4
-rw-r--r-- root/root     47264 2026-07-28 22:09 ./usr/lib/libRDKitRDBoost.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2026.03.4
-rw-r--r-- root/root    153776 2026-07-28 22:09 ./usr/lib/libRDKitRDGeneral.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2026.03.4
-rw-r--r-- root/root    145576 2026-07-28 22:09 ./usr/lib/libRDKitRDGeometryLib.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDInchiLib.so.1 -> libRDKitRDInchiLib.so.1.2026.03.4
-rw-r--r-- root/root    116904 2026-07-28 22:09 ./usr/lib/libRDKitRDInchiLib.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRDStreams.so.1 -> libRDKitRDStreams.so.1.2026.03.4
-rw-r--r-- root/root    108712 2026-07-28 22:09 ./usr/lib/libRDKitRDStreams.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2026.03.4
-rw-r--r-- root/root   1004048 2026-07-28 22:09 ./usr/lib/libRDKitRGroupDecomposition.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitRascalMCES.so.1 -> libRDKitRascalMCES.so.1.2026.03.4
-rw-r--r-- root/root    539856 2026-07-28 22:09 ./usr/lib/libRDKitRascalMCES.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2026.03.4
-rw-r--r-- root/root     80096 2026-07-28 22:09 ./usr/lib/libRDKitReducedGraphs.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2026.03.4
-rw-r--r-- root/root    408792 2026-07-28 22:09 ./usr/lib/libRDKitSLNParse.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitScaffoldNetwork.so.1 -> libRDKitScaffoldNetwork.so.1.2026.03.4
-rw-r--r-- root/root    207016 2026-07-28 22:09 ./usr/lib/libRDKitScaffoldNetwork.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2026.03.4
-rw-r--r-- root/root     47264 2026-07-28 22:09 ./usr/lib/libRDKitShapeHelpers.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2026.03.4
-rw-r--r-- root/root     26784 2026-07-28 22:09 ./usr/lib/libRDKitSimDivPickers.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2026.03.4
-rw-r--r-- root/root    969448 2026-07-28 22:09 ./usr/lib/libRDKitSmilesParse.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2026.03.4
-rw-r--r-- root/root     80032 2026-07-28 22:09 ./usr/lib/libRDKitSubgraphs.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2026.03.4
-rw-r--r-- root/root    952784 2026-07-28 22:09 ./usr/lib/libRDKitSubstructLibrary.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2026.03.4
-rw-r--r-- root/root    383160 2026-07-28 22:09 ./usr/lib/libRDKitSubstructMatch.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitSynthonSpaceSearch.so.1 -> libRDKitSynthonSpaceSearch.so.1.2026.03.4
-rw-r--r-- root/root    832784 2026-07-28 22:09 ./usr/lib/libRDKitSynthonSpaceSearch.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitTautomerQuery.so.1 -> libRDKitTautomerQuery.so.1.2026.03.4
-rw-r--r-- root/root    190776 2026-07-28 22:09 ./usr/lib/libRDKitTautomerQuery.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2026.03.4
-rw-r--r-- root/root     84200 2026-07-28 22:09 ./usr/lib/libRDKitTrajectory.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKitga.so.1 -> libRDKitga.so.1.2026.03.4
-rw-r--r-- root/root     30880 2026-07-28 22:09 ./usr/lib/libRDKitga.so.1.2026.03.4
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2026.03.4
-rw-r--r-- root/root     14328 2026-07-28 22:09 ./usr/lib/libRDKithc.so.1.2026.03.4
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/librdkit1t64/
-rw-r--r-- root/root      3179 2026-07-28 22:09 ./usr/share/doc/librdkit1t64/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/librdkit1t64/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/librdkit1t64/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/lintian/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       495 2026-07-28 22:09 ./usr/share/lintian/overrides/librdkit1t64


postgresql-10-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1239176 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-10-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1297
 Depends: postgresql-10-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-10-rdkit
 Build-Ids: feba6173f1c594bdc93f5499cc39eb5c2998f9bc

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/fe/
-rw-r--r-- root/root   1317416 2026-07-28 22:09 ./usr/lib/debug/.build-id/fe/ba6173f1c594bdc93f5499cc39eb5c2998f9bc.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-10-rdkit-dbgsym -> postgresql-10-rdkit


postgresql-10-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269104 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-10-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-10
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/10/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/10/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/10/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-10-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-10-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-10-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-10-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/10/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/10/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/10/extension/rdkit.control


postgresql-11-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1239224 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-11-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1297
 Depends: postgresql-11-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-11-rdkit
 Build-Ids: 04c1e93010b95799b88c3d62182284d95eee58d8

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/04/
-rw-r--r-- root/root   1317368 2026-07-28 22:09 ./usr/lib/debug/.build-id/04/c1e93010b95799b88c3d62182284d95eee58d8.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-11-rdkit-dbgsym -> postgresql-11-rdkit


postgresql-11-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269276 bytes: control archive=1616 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-11-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-11
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/11/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/11/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/11/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-11-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-11-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-11-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-11-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/11/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/11/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/11/extension/rdkit.control


postgresql-12-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1238684 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-12-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1297
 Depends: postgresql-12-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-12-rdkit
 Build-Ids: c841bb03810335ab25a4a6201fbf41dd0be08e28

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/c8/
-rw-r--r-- root/root   1317024 2026-07-28 22:09 ./usr/lib/debug/.build-id/c8/41bb03810335ab25a4a6201fbf41dd0be08e28.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-12-rdkit-dbgsym -> postgresql-12-rdkit


postgresql-12-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269116 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-12-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-12
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/12/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/12/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/12/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-12-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-12-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-12-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-12-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/12/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/12/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/12/extension/rdkit.control


postgresql-13-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1241572 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-13-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1300
 Depends: postgresql-13-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-13-rdkit
 Build-Ids: 5fcb2dbe34ba972cc9cf0c15d7fbbbdc100cab29

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/5f/
-rw-r--r-- root/root   1320296 2026-07-28 22:09 ./usr/lib/debug/.build-id/5f/cb2dbe34ba972cc9cf0c15d7fbbbdc100cab29.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-13-rdkit-dbgsym -> postgresql-13-rdkit


postgresql-13-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269292 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-13-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-13
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/13/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/13/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/13/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-13-rdkit/
-rw-r--r-- root/root      3182 2026-07-28 22:09 ./usr/share/doc/postgresql-13-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-13-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-13-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/13/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/13/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/13/extension/rdkit.control


postgresql-14-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1241624 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-14-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1300
 Depends: postgresql-14-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-14-rdkit
 Build-Ids: 8179c3fc89eb041df52882deea0e7249b6a237d7

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/81/
-rw-r--r-- root/root   1320448 2026-07-28 22:09 ./usr/lib/debug/.build-id/81/79c3fc89eb041df52882deea0e7249b6a237d7.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-14-rdkit-dbgsym -> postgresql-14-rdkit


postgresql-14-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269152 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-14-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-14
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/14/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/14/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/14/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-14-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-14-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-14-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-14-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/14/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/14/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/14/extension/rdkit.control


postgresql-15-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1241772 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-15-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1300
 Depends: postgresql-15-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-15-rdkit
 Build-Ids: ad7bfd115721b38fb05aa32c3cc8370b46ea4f88

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root   1320624 2026-07-28 22:09 ./usr/lib/debug/.build-id/ad/7bfd115721b38fb05aa32c3cc8370b46ea4f88.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-15-rdkit-dbgsym -> postgresql-15-rdkit


postgresql-15-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269264 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-15-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-15
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/15/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/15/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/15/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-15-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-15-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-15-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-15-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/15/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/15/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/15/extension/rdkit.control


postgresql-16-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1258980 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-16-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1317
 Depends: postgresql-16-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-16-rdkit
 Build-Ids: 48db1f486892f434c40f0ff02b3d28c4243d1bc0

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/48/
-rw-r--r-- root/root   1337872 2026-07-28 22:09 ./usr/lib/debug/.build-id/48/db1f486892f434c40f0ff02b3d28c4243d1bc0.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-16-rdkit-dbgsym -> postgresql-16-rdkit


postgresql-16-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269184 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-16-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-16
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/16/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/16/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/16/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-16-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-16-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-16-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-16-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/16/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/16/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/16/extension/rdkit.control


postgresql-17-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1259376 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-17-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1317
 Depends: postgresql-17-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-17-rdkit
 Build-Ids: 0c1fa9eb220321c6f520dfa130d5d8138d730df0

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/0c/
-rw-r--r-- root/root   1338192 2026-07-28 22:09 ./usr/lib/debug/.build-id/0c/1fa9eb220321c6f520dfa130d5d8138d730df0.debug
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-17-rdkit-dbgsym -> postgresql-17-rdkit


postgresql-17-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269164 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-17-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-17
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/17/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/17/lib/
-rw-r--r-- root/root    339264 2026-07-28 22:09 ./usr/lib/postgresql/17/lib/rdkit.so
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-17-rdkit/
-rw-r--r-- root/root      3183 2026-07-28 22:09 ./usr/share/doc/postgresql-17-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-17-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-17-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/17/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/17/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.1--4.1.1.sql
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-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit--4.6.0--4.6.1.sql
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-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/17/extension/rdkit.control


postgresql-18-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------------

 new Debian package, version 2.0.
 size 1259024 bytes: control archive=552 bytes.
     411 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: postgresql-18-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1317
 Depends: postgresql-18-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-18-rdkit
 Build-Ids: b863b940259d6d6e4a38557665a1384e41805556

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/debug/.build-id/b8/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-18-rdkit-dbgsym -> postgresql-18-rdkit


postgresql-18-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 269144 bytes: control archive=1612 bytes.
    1590 bytes,    37 lines      control
    1573 bytes,    18 lines      md5sums
 Package: postgresql-18-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 635
 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 13.1), postgresql-18
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/postgresql/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/postgresql-18-rdkit/
-rw-r--r-- root/root      3182 2026-07-28 22:09 ./usr/share/doc/postgresql-18-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    141652 2026-07-09 14:44 ./usr/share/doc/postgresql-18-rdkit/changelog.gz
-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/postgresql-18-rdkit/copyright
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/18/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/postgresql/18/extension/
-rw-r--r-- root/root      4542 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--3.8--4.0.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.0--4.0.1.sql
-rw-r--r-- root/root        40 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.0.1--4.1.sql
-rw-r--r-- root/root         0 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.1--4.1.1.sql
-rw-r--r-- root/root       326 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.1.1--4.2.sql
-rw-r--r-- root/root      1266 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.2--4.3.0.sql
-rw-r--r-- root/root      4934 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.3.0--4.4.0.sql
-rw-r--r-- root/root       403 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.4.0--4.5.0.sql
-rw-r--r-- root/root       544 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.5.0--4.6.0.sql
-rw-r--r-- root/root       454 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.6.0--4.6.1.sql
-rw-r--r-- root/root       527 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.6.1--4.7.0.sql
-rw-r--r-- root/root     11769 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.7.0--4.8.0.sql
-rw-r--r-- root/root     53074 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit--4.8.0.sql
-rw-r--r-- root/root       137 2026-07-28 22:09 ./usr/share/postgresql/18/extension/rdkit.control


python3-rdkit-dbgsym_202603.4-1.pgdg14+1_amd64.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 68391832 bytes: control archive=3212 bytes.
    2731 bytes,    12 lines      control
    6238 bytes,    59 lines      md5sums
 Package: python3-rdkit-dbgsym
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 78307
 Depends: python3-rdkit (= 202603.4-1.pgdg14+1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-rdkit
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python3-rdkit_202603.4-1.pgdg14+1_amd64.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 5037196 bytes: control archive=11588 bytes.
    1881 bytes,    36 lines      control
   40851 bytes,   407 lines      md5sums
     281 bytes,    12 lines   *  postinst             #!/bin/sh
     419 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-rdkit
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: amd64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 29777
 Depends: fonts-freefont-ttf, rdkit-data, python3-numpy2-abi0 | python3-numpy-abi9, python3 (<< 3.15), python3 (>= 3.14~), python3:any, libboost-numpy1.90.0 (>= 1.90.0), libboost-numpy1.90.0-py314, libboost-python1.90.0 (>= 1.90.0), libboost-python1.90.0-py314, libboost-serialization1.90.0 (>= 1.90.0), libc6 (>= 2.34), libcairo2 (>= 1.4.10), libcoordgen3 (>= 3.0.2), libgcc-s1 (>= 3.0), librdkit1t64 (>= 202603.4), libstdc++6 (>= 14), python3-pil
 Suggests: rdkit-doc
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.

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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/python3/dist-packages/rdkit/sping/examples/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/lib/python3/dist-packages/rdkit/utils/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/doc/python3-rdkit/
-rw-r--r-- root/root       225 2026-07-28 22:09 ./usr/share/doc/python3-rdkit/TODO.Debian
-rw-r--r-- root/root      3179 2026-07-28 22:09 ./usr/share/doc/python3-rdkit/changelog.Debian.gz
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-rw-r--r-- root/root     64692 2026-07-28 22:09 ./usr/share/doc/python3-rdkit/copyright


rdkit-data_202603.4-1.pgdg14+1_all.deb
--------------------------------------

 new Debian package, version 2.0.
 size 13145224 bytes: control archive=6448 bytes.
     450 bytes,    14 lines      control
   17951 bytes,   209 lines      md5sums
 Package: rdkit-data
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: all
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 58666
 Section: science
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (data files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.
  .
  This package contains data files.

drwxr-xr-x root/root         0 2026-07-28 22:09 ./
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/AtomAtomSimilarity/
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-rw-r--r-- root/root        37 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CMakeLists.txt
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/CalcLigRMSD/
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-rw-r--r-- root/root      3966 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/README.md
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/
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-rw-r--r-- root/root      2017 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/JVE_renamed.pdb
-rw-r--r-- root/root      3076 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/N15_renamed.pdb
-rw-r--r-- root/root      2805 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/SKE_crystal_aligned_1.pdb
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-rw-r--r-- root/root    351089 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/aurka_protein_2c6e.pdb
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-rw-r--r-- root/root      3999 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_JVE_pH74_netcharge1.pdb
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-rw-r--r-- root/root      5595 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_SKE_pH74_netcharge1.pdb
-rw-r--r-- root/root      6256 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_3w2p_1C9_pH74_netcharge1.pdb
-rw-r--r-- root/root      2805 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/data/lig_crystal_aligned.pdb
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/CalcLigRMSD/figures/
-rw-r--r-- root/root    742146 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/figures/1C9.png
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-rw-r--r-- root/root    429769 2026-07-09 14:44 ./usr/share/RDKit/Contrib/CalcLigRMSD/figures/N15.png
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/ChiralPairs/
-rw-r--r-- root/root     16038 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-rw-r--r-- root/root       537 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ChiralPairs/README.txt
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/ConformerParser/
-rw-r--r-- root/root       378 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-rw-r--r-- root/root      4397 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/ConformerParser/Wrap/
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-rw-r--r-- root/root      3334 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-rw-r--r-- root/root      1238 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-rw-r--r-- root/root      4350 2026-07-09 14:44 ./usr/share/RDKit/Contrib/ConformerParser/test.cpp
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/Fastcluster/
-rw-r--r-- root/root      1533 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/README.md
-rw-r--r-- root/root      2717 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-rw-r--r-- root/root      4198 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
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-rw-r--r-- root/root      2323 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-rw-r--r-- root/root     26070 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/fp.tsv
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/Fastcluster/testdata/
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-rw-r--r-- root/root       358 2026-07-09 14:44 ./usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/FreeWilson/
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-rw-r--r-- root/root     25449 2026-07-09 14:44 ./usr/share/RDKit/Contrib/FreeWilson/freewilson.py
-rw-r--r-- root/root        37 2026-07-09 14:44 ./usr/share/RDKit/Contrib/FreeWilson/pytest.ini
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/FreeWilson/test/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/Glare/
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drwxr-xr-x root/root         0 2026-07-28 22:09 ./usr/share/RDKit/Contrib/IFG/
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rdkit-doc_202603.4-1.pgdg14+1_all.deb
-------------------------------------

 new Debian package, version 2.0.
 size 7362500 bytes: control archive=119068 bytes.
     495 bytes,    15 lines      control
  534042 bytes,  5284 lines      md5sums
 Package: rdkit-doc
 Source: rdkit
 Version: 202603.4-1.pgdg14+1
 Architecture: all
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 82344
 Depends: libjs-jquery, libjs-underscore
 Section: doc
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (documentation)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.
  .
  This package contains the documentation.

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+------------------------------------------------------------------------------+
| Post Build                                   Sat, 15 Aug 2026 20:19:13 +0000 |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                      Sat, 15 Aug 2026 20:19:13 +0000 |
+------------------------------------------------------------------------------+

Purging /build/rdkit-binaries-forky-amd64
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                      Sat, 15 Aug 2026 20:19:18 +0000 |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Profiles: pgdg forky
Build Type: binary
Build-Space: 6892496
Build-Time: 671
Distribution: forky-pgdg
Host Architecture: amd64
Install-Time: 116
Job: /home/buildd/workspace/rdkit-binaries/architecture/amd64/distribution/forky/rdkit_202603.4-1.pgdg14+1.dsc
Machine Architecture: amd64
Package: rdkit
Package-Time: 792
Source-Version: 202603.4-1.pgdg14+1
Space: 6892496
Status: successful
Version: 202603.4-1.pgdg14+1
--------------------------------------------------------------------------------
Finished at 2026-08-15T20:19:08Z
Build needed 00:13:12, 6892496k disk space
