@cwd /usr/pkg
@name sra-tools-3.2.0nb2
@blddep hdf5-1.14.6
@pkgdep hdf5>=1.8.11
@blddep libepoll-shim-0.0.20240608
@pkgdep libepoll-shim>=0.0.20210418
@blddep libxml2-2.15.1
@pkgdep libxml2>=2.14.6nb2
@blddep python313-3.13.14
@pkgdep python313>=3.13
@blddep zstd-1.5.7
@pkgdep zstd>=1.3.6
@blddep digest-20220214
@blddep cmake-4.3.3
@blddep mktools-20250213
@blddep bash-5.3.15
@blddep bison-3.8.2nb1
@blddep cwrappers-20220403
@comment $NetBSD: PLIST,v 1.3 2025/02/02 14:25:34 bacon Exp $
bin/abi-dump
@comment Symlink:abi-dump.3
bin/abi-dump.3
@comment Symlink:abi-dump.3.2.0
bin/abi-dump.3.2.0
@comment MD5:748986f02ef932dc72b6f247700dcca7
bin/align-info
@comment Symlink:align-info.3
bin/align-info.3
@comment Symlink:align-info.3.2.0
bin/align-info.3.2.0
@comment MD5:a8049b6fd8c16dad535b83110526c23d
bin/cache-mgr
@comment Symlink:cache-mgr.3
bin/cache-mgr.3
@comment Symlink:cache-mgr.3.2.0
bin/cache-mgr.3.2.0
@comment MD5:54d545242bf2ec8bfe4ab78773d1c5e1
bin/check-corrupt
@comment Symlink:check-corrupt.3
bin/check-corrupt.3
@comment Symlink:check-corrupt.3.2.0
bin/check-corrupt.3.2.0
@comment MD5:c1eb4b444b133acc52eeaf1d45d707ea
bin/fasterq-dump
@comment Symlink:fasterq-dump.3
bin/fasterq-dump-orig.3.2.0
@comment MD5:b9e6d30b9ea11e82980918c59b0633f8
bin/fasterq-dump.3
@comment Symlink:fasterq-dump.3.2.0
bin/fasterq-dump.3.2.0
@comment Symlink:sratools.3.2.0
bin/fastq-dump
@comment Symlink:fastq-dump.3
bin/fastq-dump-orig.3.2.0
@comment MD5:8b133de3f24b139e5fb715989ab3b620
bin/fastq-dump.3
@comment Symlink:fastq-dump.3.2.0
bin/fastq-dump.3.2.0
@comment Symlink:sratools.3.2.0
bin/illumina-dump
@comment Symlink:illumina-dump.3
bin/illumina-dump.3
@comment Symlink:illumina-dump.3.2.0
bin/illumina-dump.3.2.0
@comment MD5:505be60567fa3b2d9dd8094259511228
bin/kdbmeta
@comment Symlink:kdbmeta.3
bin/kdbmeta.3
@comment Symlink:kdbmeta.3.2.0
bin/kdbmeta.3.2.0
@comment MD5:ea3441c351e78569b48ec0bb11f875a1
bin/ngs-pileup
@comment Symlink:ngs-pileup.3
bin/ngs-pileup.3
@comment Symlink:ngs-pileup.3.2.0
bin/ngs-pileup.3.2.0
@comment MD5:76dd291369bc9da512b192978955c976
bin/prefetch
@comment Symlink:prefetch.3
bin/prefetch-orig.3.2.0
@comment MD5:7a4d87e2b8971b91044786a8a6bd9fc5
bin/prefetch.3
@comment Symlink:prefetch.3.2.0
bin/prefetch.3.2.0
@comment Symlink:sratools.3.2.0
bin/rcexplain
@comment Symlink:rcexplain.3
bin/rcexplain.3
@comment Symlink:rcexplain.3.2.0
bin/rcexplain.3.2.0
@comment MD5:32431ae3d2044646229e4f4d38ec95e2
bin/ref-variation
@comment Symlink:ref-variation.3
bin/ref-variation.3
@comment Symlink:ref-variation.3.2.0
bin/ref-variation.3.2.0
@comment MD5:b4262de08f6f9a5477cad83154b5a990
bin/sam-dump
@comment Symlink:sam-dump.3
bin/sam-dump-orig.3.2.0
@comment MD5:c9bfa40b23b6e4e0a511fc2e598e392b
bin/sam-dump.3
@comment Symlink:sam-dump.3.2.0
bin/sam-dump.3.2.0
@comment Symlink:sratools.3.2.0
bin/sff-dump
@comment Symlink:sff-dump.3
bin/sff-dump.3
@comment Symlink:sff-dump.3.2.0
bin/sff-dump.3.2.0
@comment MD5:dbf55b331c465f6105b983f28f610866
bin/sra-info
@comment Symlink:sra-info.3
bin/sra-info.3
@comment Symlink:sra-info.3.2.0
bin/sra-info.3.2.0
@comment MD5:93c134401462cf02e7533aacfbf96c13
bin/sra-pileup
@comment Symlink:sra-pileup.3
bin/sra-pileup-orig.3.2.0
@comment MD5:8ac1f28e19ac4326871248c0071480b3
bin/sra-pileup.3
@comment Symlink:sra-pileup.3.2.0
bin/sra-pileup.3.2.0
@comment Symlink:sratools.3.2.0
bin/sra-search
@comment Symlink:sra-search.3
bin/sra-search.3
@comment Symlink:sra-search.3.2.0
bin/sra-search.3.2.0
@comment MD5:cdb2a42c30360480f7fd9159d415fbad
bin/sra-stat
@comment Symlink:sra-stat.3
bin/sra-stat.3
@comment Symlink:sra-stat.3.2.0
bin/sra-stat.3.2.0
@comment MD5:cc2534b3c1a4b0856424dc9e73f12909
bin/srapath
@comment Symlink:srapath.3
bin/srapath-orig.3.2.0
@comment MD5:28c18cf34d8d8731ca71190e6d1b109e
bin/srapath.3
@comment Symlink:srapath.3.2.0
bin/srapath.3.2.0
@comment Symlink:sratools.3.2.0
bin/sratools
@comment Symlink:sratools.3
bin/sratools.3
@comment Symlink:sratools.3.2.0
bin/sratools.3.2.0
@comment MD5:0571e181e6a88f71ef831d9d9fb17a8c
bin/test-sra
@comment Symlink:test-sra.3
bin/test-sra.3
@comment Symlink:test-sra.3.2.0
bin/test-sra.3.2.0
@comment MD5:10877b9c2a023c78a2d25b29ea8fb3ce
bin/var-expand
@comment Symlink:var-expand.3
bin/var-expand.3
@comment Symlink:var-expand.3.2.0
bin/var-expand.3.2.0
@comment MD5:02ba2c5b8e28d8ba645d6126963d590b
bin/vdb-config
@comment Symlink:vdb-config.3
bin/vdb-config.3
@comment Symlink:vdb-config.3.2.0
bin/vdb-config.3.2.0
@comment MD5:6e07629089558aade27c8a5a8f88bc37
bin/vdb-decrypt
@comment Symlink:vdb-decrypt.3
bin/vdb-decrypt.3
@comment Symlink:vdb-decrypt.3.2.0
bin/vdb-decrypt.3.2.0
@comment MD5:b86595723dc291da8ca52561978586ab
bin/vdb-dump
@comment Symlink:vdb-dump.3
bin/vdb-dump-orig.3.2.0
@comment MD5:dfc472ccb88f96c74b716d012870bb02
bin/vdb-dump.3
@comment Symlink:vdb-dump.3.2.0
bin/vdb-dump.3.2.0
@comment Symlink:sratools.3.2.0
bin/vdb-encrypt
@comment Symlink:vdb-encrypt.3
bin/vdb-encrypt.3
@comment Symlink:vdb-encrypt.3.2.0
bin/vdb-encrypt.3.2.0
@comment MD5:64e99ac0fd4fcf595c363c8f088ae297
bin/vdb-validate
@comment Symlink:vdb-validate.3
bin/vdb-validate.3
@comment Symlink:vdb-validate.3.2.0
bin/vdb-validate.3.2.0
@comment MD5:c807ba420542571a273c7105dd0e51c5
include/ncbi-vdb/NGS.hpp
@comment MD5:0e24ffe1d4bbe4318c181770c8f6b47f
include/ngs/Alignment.hpp
@comment MD5:0619cc0a6bfb5e75acfab69bb3c2edcd
include/ngs/AlignmentIterator.hpp
@comment MD5:d2eee8edf41b9f3195d1fbb35e85caf5
include/ngs/ErrorMsg.hpp
@comment MD5:224f10e40f9deb599502c2f3cd6ee30f
include/ngs/Fragment.hpp
@comment MD5:223b1b5d283b9ce3b44a05152edfe608
include/ngs/FragmentIterator.hpp
@comment MD5:800b5dc689d8f5186cf67242bdaf5e6f
include/ngs/Package.hpp
@comment MD5:9b881818ebd62ba76f82e9ec0aad3e4c
include/ngs/Pileup.hpp
@comment MD5:4849a19cda1dac4a436613763875adf0
include/ngs/PileupEvent.hpp
@comment MD5:29bc26963bd8c4a343269ba64887399d
include/ngs/PileupEventIterator.hpp
@comment MD5:3a4c633d2b22b9d7b2f611999bd99c79
include/ngs/PileupIterator.hpp
@comment MD5:cef055217027830731e22d2d7c9cdba8
include/ngs/Read.hpp
@comment MD5:a027b7a30df7106538716b1e26f50f7b
include/ngs/ReadCollection.hpp
@comment MD5:ef9ab36a38e5ba246f43a4c6a0fc70e7
include/ngs/ReadGroup.hpp
@comment MD5:ef53dd85062edbc30d649b9849d14844
include/ngs/ReadGroupIterator.hpp
@comment MD5:d22ea744d17f0134d7aedfc99bc4cfb7
include/ngs/ReadIterator.hpp
@comment MD5:4283177d366959f4e0de23e7521b2889
include/ngs/Reference.hpp
@comment MD5:9f6c238696b70ef892114b3238971a45
include/ngs/ReferenceIterator.hpp
@comment MD5:f66ccb1eb314defc190863d75fa439ad
include/ngs/ReferenceSequence.hpp
@comment MD5:1c6399405703f3028b16d055abf35851
include/ngs/Statistics.hpp
@comment MD5:38af2eb7fd04b8a2fb31dfe24f238318
include/ngs/StringRef.hpp
@comment MD5:6a0e6562ede95abe98cf8c9d84601a53
include/ngs/adapter/AlignmentItf.hpp
@comment MD5:53522187c65703a62b0adbdd32645a55
include/ngs/adapter/ErrorMsg.hpp
@comment MD5:1c1ecc2e8595bb19c3297e36e383153a
include/ngs/adapter/FragmentItf.hpp
@comment MD5:77a0255bfcbe13729bad24976a6a8e3a
include/ngs/adapter/PileupEventItf.hpp
@comment MD5:0b0af8addf3f0aa542afc5c48cc61a64
include/ngs/adapter/PileupItf.hpp
@comment MD5:fac7f77229ab6e3163559fbbddda7102
include/ngs/adapter/ReadCollectionItf.hpp
@comment MD5:3538b8c7124bcc202df0a1a48c68ce93
include/ngs/adapter/ReadGroupItf.hpp
@comment MD5:2612d7c11a196d81b5c58fbd7af40f8c
include/ngs/adapter/ReadItf.hpp
@comment MD5:6877a3e01bf2ee958f6d54ca8f788cc4
include/ngs/adapter/Refcount.hpp
@comment MD5:49ed1ef141906f5cc0d06f56825d2fd1
include/ngs/adapter/ReferenceItf.hpp
@comment MD5:33b99a63c301b67f250ea9c6aa8c9ea3
include/ngs/adapter/ReferenceSequenceItf.hpp
@comment MD5:9afcc3dc121cb022eb27153fc5c0c806
include/ngs/adapter/StatisticsItf.hpp
@comment MD5:0b457d899af639f9a3e74d96ff756e09
include/ngs/adapter/StringItf.hpp
@comment MD5:e7e3417c990bf971129158363c3e44a3
include/ngs/adapter/defs.h
@comment MD5:cba7d751668888992b0242407fd5be03
include/ngs/inl/Alignment.hpp
@comment MD5:778336b641f057e2f2b174dd25c426b4
include/ngs/inl/AlignmentIterator.hpp
@comment MD5:468f77119b67304ffeeee2fa81ef9ddc
include/ngs/inl/Fragment.hpp
@comment MD5:8ef3a70b22cadf4741a08ba6fe74106e
include/ngs/inl/FragmentIterator.hpp
@comment MD5:bd023e585cc233efa19846465f23ae71
include/ngs/inl/Package.hpp
@comment MD5:f37387c6c70e9c189234445862e30bcd
include/ngs/inl/Pileup.hpp
@comment MD5:90dc1c4696a13955d135212a6152881e
include/ngs/inl/PileupEvent.hpp
@comment MD5:aa522e9f62cd17b72fc4f28cb4ff77b8
include/ngs/inl/PileupEventIterator.hpp
@comment MD5:f6f93486bdad662026d55d475c0bf1ec
include/ngs/inl/PileupIterator.hpp
@comment MD5:38be128a3922b2b4fe7855bcb88ea336
include/ngs/inl/Read.hpp
@comment MD5:bbb4ea6ba972e23c6a773c03430e0ab2
include/ngs/inl/ReadCollection.hpp
@comment MD5:304a505775ef21d43f74f6bc9fa540f5
include/ngs/inl/ReadGroup.hpp
@comment MD5:c8283e3b3aa9d6c4c52d8cc4cba72376
include/ngs/inl/ReadGroupIterator.hpp
@comment MD5:5ba6019a880e0041d28b0ccc897cd36b
include/ngs/inl/ReadIterator.hpp
@comment MD5:e8a9721918f657f2ce78db31d24f19ca
include/ngs/inl/Reference.hpp
@comment MD5:3bae146710ad6dcd648d7707eea81409
include/ngs/inl/ReferenceIterator.hpp
@comment MD5:9e3f4a26b47ffad3e05b3ac29fe85b87
include/ngs/inl/ReferenceSequence.hpp
@comment MD5:9b974f0741c748d0c9db37a2cdeeb054
include/ngs/inl/Statistics.hpp
@comment MD5:15836d6a468671807c6ee0e180234e84
include/ngs/inl/StringRef.hpp
@comment MD5:1b19bd2384b4344bb76f38ab2bc17d4a
include/ngs/itf/AlignmentItf.h
@comment MD5:6715ed32f9cf4e8d74c6d68001101c47
include/ngs/itf/AlignmentItf.hpp
@comment MD5:0d05d196c200f8f6c4880137c4854218
include/ngs/itf/ErrBlock.h
@comment MD5:e67493e063f1bd60e4ff58187547c309
include/ngs/itf/ErrBlock.hpp
@comment MD5:c5b4fa4aac3386a9c237bc0bcf0d2893
include/ngs/itf/ErrorMsg.hpp
@comment MD5:adf7c207e0ae05b2f40018aec4e1830f
include/ngs/itf/FragmentItf.h
@comment MD5:548212378516de22842c11ff28339803
include/ngs/itf/FragmentItf.hpp
@comment MD5:121e8a7532fb49f14482f0e93e58f9e4
include/ngs/itf/PackageItf.hpp
@comment MD5:075c758a6a10bfae051d95c3fad5039e
include/ngs/itf/PileupEventItf.h
@comment MD5:3b92d1b8acbf170184f64603d09b6f37
include/ngs/itf/PileupEventItf.hpp
@comment MD5:2df5e3e104a64facef0a82a88c3d2b41
include/ngs/itf/PileupItf.h
@comment MD5:07cdc0ad0a3eaae1555aa9ed68760a5d
include/ngs/itf/PileupItf.hpp
@comment MD5:05280cfaf093f959cfc23f4d17df350f
include/ngs/itf/ReadCollectionItf.h
@comment MD5:dbe5486a322dd167c0a624a5bcf57f20
include/ngs/itf/ReadCollectionItf.hpp
@comment MD5:da7d0bbf6edf857c7292855ef05f6de8
include/ngs/itf/ReadGroupItf.h
@comment MD5:01d6b5e4ea6b18ad6a719023a27edd68
include/ngs/itf/ReadGroupItf.hpp
@comment MD5:a2deb36f00290722d2603e88988ee285
include/ngs/itf/ReadItf.h
@comment MD5:92ae7e603201c303d1083721138e1ed4
include/ngs/itf/ReadItf.hpp
@comment MD5:ac352bde7ff629d55ce0eabb500e509f
include/ngs/itf/Refcount.h
@comment MD5:2b31d8d50fbb9cfd0ba68942bae2adc5
include/ngs/itf/Refcount.hpp
@comment MD5:f8853657890d94e0b172b60fbc1466a8
include/ngs/itf/ReferenceItf.h
@comment MD5:0cc1ae6eb72a8235a8d0e8a0eff37a58
include/ngs/itf/ReferenceItf.hpp
@comment MD5:1c25262aa9dfc43ad8d6a1b7c5b1bb7d
include/ngs/itf/ReferenceSequenceItf.h
@comment MD5:150ba6c3937800002b6d390ea6b59138
include/ngs/itf/ReferenceSequenceItf.hpp
@comment MD5:28b0e70a69468d3882592ad7f1cce4da
include/ngs/itf/StatisticsItf.h
@comment MD5:77cc340becfa0670186adac3eb09abd6
include/ngs/itf/StatisticsItf.hpp
@comment MD5:3c85f1ecfc66e4f20e3eddc93c396733
include/ngs/itf/StringItf.h
@comment MD5:1e18aebf9658e752c864968387a678e5
include/ngs/itf/StringItf.hpp
@comment MD5:52fcf9326811cd9299dc7c9365c5e759
include/ngs/itf/VTable.h
@comment MD5:d45c54a5d66e62c636d47faaed9933b5
include/ngs/itf/VTable.hpp
@comment MD5:d69aab996f95f0321c3e85fb88f24a2c
include/ngs/itf/defs.h
@comment MD5:86c903d9734d698a737c88e9a371e0d4
include/ngs/unix/arm64/atomic32.h
@comment MD5:5caecc8aa9e2957528285969433f220e
include/ngs/unix/fat86/atomic32.h
@comment MD5:ac65b330be8096c75678822bfe19532f
include/ngs/unix/i386/atomic32.h
@comment MD5:8636df65a31b6e7e28c277db357862da
include/ngs/unix/x86_64/atomic32.h
@comment MD5:82d299f2d674ecdf9d71d4f3df982ce7
include/ngs/win/atomic32.h
@comment MD5:52942aee8eb1211f5b21215baaa534e0
include/ngs/win/stdbool.h
@comment MD5:33aa7ec998099bb57e28435352697eab
lib/libncbi-ngs-c++-static.a
@comment Symlink:libncbi-ngs-c++.a
lib/libncbi-ngs-c++.a
@comment Symlink:libncbi-ngs-c++.a.3
lib/libncbi-ngs-c++.a.3
@comment Symlink:libncbi-ngs-c++.a.3.2.0
lib/libncbi-ngs-c++.a.3.2.0
@comment MD5:6e31efef9fe05ef75af8010e264e9a7b
lib/libncbi-ngs-static.a
@comment Symlink:libncbi-ngs.a
lib/libncbi-ngs.a
@comment Symlink:libncbi-ngs.a.3
lib/libncbi-ngs.a.3
@comment Symlink:libncbi-ngs.a.3.2.0
lib/libncbi-ngs.a.3.2.0
@comment MD5:d3cc5f27876b7b82097b710313aa9166
lib/libncbi-ngs.so
@comment Symlink:libncbi-ngs.so.3
lib/libncbi-ngs.so.3
@comment Symlink:libncbi-ngs.so.3.2.0
lib/libncbi-ngs.so.3.2.0
@comment MD5:3b4db2c848a393ff4dc54cd888e5d4ba
lib/libngs-c++-static.a
@comment Symlink:libngs-c++.a
lib/libngs-c++.a
@comment Symlink:libngs-c++.a.3
lib/libngs-c++.a.3
@comment Symlink:libngs-c++.a.3.2.0
lib/libngs-c++.a.3.2.0
@comment MD5:290f99744b6a2de9e85c850c71024098
lib/libngs-c++.so
@comment Symlink:libngs-c++.so.3
lib/libngs-c++.so.3
@comment Symlink:libngs-c++.so.3.2.0
lib/libngs-c++.so.3.2.0
@comment MD5:1d75e8fc888cc72d1a629340d75b6f7a
share/examples/sra-tools/AlignSliceTest.cpp
@comment MD5:daaa71893212635c5b89ad6ac9bdc478
share/examples/sra-tools/AlignTest.cpp
@comment MD5:e65eb6a887e3cd0743d504755bd45535
share/examples/sra-tools/DumpReferenceFASTA.cpp
@comment MD5:2b802ee177a6b079e3cc77c67c810986
share/examples/sra-tools/FragTest.cpp
@comment MD5:3f90972e0a7b120725577c252364ad5a
share/examples/sra-tools/Makefile
@comment MD5:341a9e6e2255dc63d783128e7fe06fda
share/examples/sra-tools/PileupTest.cpp
@comment MD5:10db14e1ebc44a4fdb14536eb2345bd8
share/examples/sra-tools/README.txt
@comment MD5:3451d1a26d6ed1c4a2302501f5d9ac4c
share/examples/sra-tools/RefTest.cpp
@comment MD5:8ea3f49474f04710c6207b5c55c8f871
share/examples/sra-tools/expected.txt
@comment MD5:70ea78277e8bae463055052977e2899d
share/examples/sra-tools/python/AlignSliceTest.py
@comment MD5:bf77d9a30c25a3f124cd07a978ebfb62
share/examples/sra-tools/python/AlignTest.py
@comment MD5:b673ee06bb1c6f5bc09b0a2090674435
share/examples/sra-tools/python/FragTest.py
@comment MD5:22f471b0468738d65348badd0ce066c0
share/examples/sra-tools/python/Makefile
@comment MD5:8753afa74915f7037c70cb7227c47b6f
share/examples/sra-tools/python/PileupTest.py
@comment MD5:82905af561f643c5bde841d0cba212cd
share/examples/sra-tools/python/README.txt
@comment MD5:26ff1851a85ec32415321626d81e6213
share/examples/sra-tools/python/RefTest.py
@comment MD5:1b63adf839d4af8815dafd584ccb9ca5
share/examples/sra-tools/python/expected.txt
@comment MD5:c8fbefb7217dfce2aae88d479c074ce0
@cwd /usr/pkg
@ignore
+COMMENT
@ignore
+DESC
@ignore
+BUILD_VERSION
@ignore
+BUILD_INFO
@ignore
+SIZE_PKG
@ignore
+SIZE_ALL
