# /=====================================================================\ #
# |  LaTeXML::Common::Config                                            | #
# | Configuration logic for LaTeXML                                     | #
# |=====================================================================| #
# | Part of LaTeXML:                                                    | #
# |  Public domain software, produced as part of work done by the       | #
# |  United States Government & not subject to copyright in the US.     | #
# |---------------------------------------------------------------------| #
# | Bruce Miller <bruce.miller@nist.gov>                                | #
# | Deyan Ginev <deyan.ginev@nist.gov>                          #_#     | #
# | http://dlmf.nist.gov/LaTeXML/                              (o o)    | #
# \=========================================================ooo==U==ooo=/ #
package LaTeXML::Common::Config;
use strict;
use warnings;
use Carp;
use Getopt::Long qw(:config no_ignore_case);
use Pod::Usage;
use Pod::Find qw(pod_where);
use LaTeXML::Util::Pathname;
use LaTeXML::Global;
use LaTeXML::Common::Error;
use Data::Dumper;
our $PROFILES_DB = {};    # Class-wide, caches all profiles that get used while the server is alive
our $is_bibtex  = qr/(^literal\:\s*\@)|(\.bib$)/;
our $is_archive = qr/(^literal\:PK)|(\.zip$)/;

sub new {
  my ($class, %opts) = @_;
  #TODO: How about defaults in the daemon server use case? Should we support those here?
  #      or are defaults always bad/confusing to allow?
  %opts = () unless %opts;
  return bless { dirty => 1, opts => \%opts }, $class; }

###########################################
#### Command-line reader              #####
###########################################
sub getopt_specification {
  my (%options) = @_;
  my $opts = $options{options} || {};
  my $spec = {
    # Basics and Paths
    "output=s"        => \$$opts{destination},
    "destination=s"   => \$$opts{destination},
    "log=s"           => \$$opts{log},
    "preload=s"       => \@{ $$opts{preload} },
    "preamble=s"      => \$$opts{preamble},
    "postamble=s"     => \$$opts{postamble},
    "base=s"          => \$$opts{base},
    "path=s"          => \@{ $$opts{paths} },
    "quiet"           => sub { $$opts{verbosity}--; },
    "verbose"         => sub { $$opts{verbosity}++; },
    "strict"          => \$$opts{strict},
    "includestyles"   => \$$opts{includestyles},
    "inputencoding=s" => \$$opts{inputencoding},
    # Formats
    "xml"     => sub { $$opts{format}    = 'xml'; },
    "tex"     => sub { $$opts{format}    = 'tex'; },
    "box"     => sub { $$opts{format}    = 'box'; },
    "bibtex"  => sub { $$opts{type}      = 'BibTeX'; },
    "noparse" => sub { $$opts{mathparse} = 'no'; },
    "format=s" => \$$opts{format},
    "parse=s"  => \$$opts{mathparse},
    # Profiles
    "profile=s"   => \$$opts{profile},
    "cache_key=s" => \$$opts{cache_key},
    "mode=s"      => \$$opts{profile},
    "source=s"    => \$$opts{source},
    # Output framing
    "embed" => sub { $$opts{whatsout} = 'fragment'; },
    "whatsin=s"  => \$$opts{whatsin},
    "whatsout=s" => \$$opts{whatsout},
    # Daemon options
    "autoflush=i" => \$$opts{input_limit},
    "timeout=i"   => \$$opts{timeout},
    "expire=i"    => \$$opts{expire},
    "address=s"   => \$$opts{address},
    "port=i"      => \$$opts{port},
    # Post-processing
    "post!"           => \$$opts{post},
    "validate!"       => \$$opts{validate},
    "omitdoctype!"    => \$$opts{omitdoctype},
    "numbersections!" => \$$opts{numbersections},
    "timestamp=s"     => \$$opts{timestamp},
    # Various choices for math processing.
    # Note: Could want OM embedded in mml annotation, too.
    # In general, could(?) want multiple math reps within <Math>
    # OR, multiple math reps combined with <mml:sematics>
    #   or, in fact, _other_ parallel means? (om?, omdoc? ...)
    # So, need to separate multiple transformations from the combination.
    # However, IF combining, then will need to support a id/ref mechanism.
    "mathimagemagnification=f"    => \$$opts{mathimagemag},
    "linelength=i"                => \$$opts{linelength},
    "plane1!"                     => \$$opts{plane1},
    "hackplane1!"                 => \$$opts{hackplane1},
    "mathimages"                  => sub { _addMathFormat($opts, 'images'); },
    "nomathimages"                => sub { _removeMathFormat($opts, 'images'); },
    "mathsvg"                     => sub { _addMathFormat($opts, 'svg'); },
    "nomathsvg"                   => sub { _removeMathFormat($opts, 'svg'); },
    "presentationmathml|pmml"     => sub { _addMathFormat($opts, 'pmml'); },
    "contentmathml|cmml"          => sub { _addMathFormat($opts, 'cmml'); },
    "openmath|om"                 => sub { _addMathFormat($opts, 'om'); },
    "keepXMath|xmath"             => sub { _addMathFormat($opts, 'xmath'); },
    "nopresentationmathml|nopmml" => sub { _removeMathFormat($opts, 'pmml'); },
    "nocontentmathml|nocmml"      => sub { _removeMathFormat($opts, 'cmml'); },
    "noopenmath|noom"             => sub { _removeMathFormat($opts, 'om'); },
    "nokeepXMath|noxmath"         => sub { _removeMathFormat($opts, 'xmath'); },
    "mathtex"                     => sub { _addMathFormat($opts, 'mathtex'); },
    "nomathtex"                   => sub { _removeMathFormat($opts, 'mathtex'); },
    "parallelmath!"                => \$$opts{parallelmath},
    # Some general XSLT/CSS/JavaScript options.
    "stylesheet=s"      => \$$opts{stylesheet},
    "xsltparameter=s"   => \@{ $$opts{xsltparameters} },
    "css=s"             => \@{ $$opts{css} },
    "defaultresources!" => \$$opts{defaultresources},
    "javascript=s"      => \@{ $$opts{javascript} },
    "icon=s"            => \$$opts{icon},
    # Options for broader document set processing
    "split!" => \$$opts{split},
    "splitat=s" => sub { $$opts{splitat} = $_[1];
      $$opts{split} = 1 unless defined $$opts{split}; },
    "splitpath=s" => sub { $$opts{splitpath} = $_[1];
      $$opts{split} = 1 unless defined $$opts{split}; },
    "splitnaming=s" => sub { $$opts{splitnaming} = $_[1];
      $$opts{split} = 1 unless defined $$opts{split}; },
    "scan!"           => \$$opts{scan},
    "crossref!"       => \$$opts{crossref},
    "urlstyle=s"      => \$$opts{urlstyle},
    "navigationtoc=s" => \$$opts{navtoc},
    "navtoc=s"        => \$$opts{navtoc},
    # Generating indices
    "index!"         => \$$opts{index},
    "permutedindex!" => \$$opts{permutedindex},
    "splitindex!"    => \$$opts{splitindex},
    # Generating Bibliographies
    "bibliography=s"     => \@{ $$opts{bibliographies} },    # TODO: Document
    "splitbibliography!" => \$$opts{splitbibliography},
    # Options for two phase processing
    "prescan"           => \$$opts{prescan},
    "dbfile=s"          => \$$opts{dbfile},
    "sitedirectory=s"   => \$$opts{sitedirectory},
    "sourcedirectory=s" => \$$opts{sourcedirectory},
    # For graphics: vaguely similar issues, but more limited.
    # includegraphics images (eg. ps) can be converted to webimages (eg.png)
    # picture/pstricks images can be converted to png or possibly svg.
    "graphicimages!" => \$$opts{dographics},
    "graphicsmap=s"  => \@{ $$opts{graphicsmaps} },
    "svg!"           => \$$opts{svg},
    "pictureimages!" => \$$opts{picimages},
    # HELP
    "comments!"    => \$$opts{comments},
    "VERSION!"     => \$$opts{showversion},
    "debug=s"      => \@{ $$opts{debug} },
    "documentid=s" => \$$opts{documentid},
    "help"         => \$$opts{help}
  };
  return ($spec, $opts) unless ($options{type} && ($options{type} eq 'keyvals'));
  # Representation use case:
  my $keyvals = $options{keyvals} || [];
  my $rep_spec = {};    # Representation specification
  foreach my $key (keys %$spec) {
    if ($key =~ /^(.+)=\w$/) {
      my $name = $1;
      $$rep_spec{$key} = sub { CORE::push @$keyvals, [$name, $_[1]] };
    } else {
      $$rep_spec{$key} = sub {
        my $ctl = $_[0]->{ctl};
        my $used = ($$ctl[0] ? 'no' : '') . $$ctl[1];
        CORE::push @$keyvals, [$used, undef] };
    }
  }
  return ($rep_spec, $keyvals);
}
# TODO: Separate the keyvals scan from getopt_specification()
#       into its own sub, using @GETOPT_KEYS entirely.
our @GETOPT_KEYS = keys %{ (getopt_specification())[0] };

sub read {
  my ($self, $argref, %read_options) = @_;
  my $opts = $$self{opts};
  local @ARGV = @$argref;
  my ($spec) = getopt_specification(options => $opts);
  my $silent = %read_options && $read_options{silent};
  my $getOptions_success = GetOptions(%{$spec});
  if (!$getOptions_success && !$silent) {
    pod2usage(-message => $LaTeXML::IDENTITY, -exitval => 1, -verbose => 99,
      -input => pod_where({ -inc => 1 }, __PACKAGE__),
      -sections => 'OPTIONS/SYNOPSIS', -output => \*STDERR);
  }
  if (!$silent && $$opts{help}) {
    pod2usage(-message => $LaTeXML::IDENTITY, -exitval => 1, -verbose => 99,
      -input => pod_where({ -inc => 1 }, __PACKAGE__),
      -sections => 'OPTIONS/SYNOPSIS', output => \*STDOUT);
  }

  # Check that options for system I/O (destination and log) are valid before wasting any time...
  foreach my $IO_option (qw(destination log)) {
    if ($$opts{$IO_option}) {
      $$opts{$IO_option} = pathname_canonical($$opts{$IO_option});
      if (my $dir = pathname_directory($$opts{$IO_option})) {
        pathname_mkdir($dir) or croak "Couldn't create $IO_option directory $dir: $!"; } } }
  # Removed math formats are irrelevant for conversion:
  delete $$opts{removed_math_formats};

  if ($$opts{showversion}) { print STDERR "$LaTeXML::IDENTITY\n"; exit(1); }

  $$opts{source} = $ARGV[0] unless $$opts{source};
  # Special source-based guessing needs to happen here,
  #   as we won't have access to the source file/literal/resource later on:
  if (!$$opts{type} || ($$opts{type} eq 'auto')) {
    $$opts{type} = 'BibTeX' if ($$opts{source} && ($$opts{source} =~ /$is_bibtex/)); }
  if (!$$opts{whatsin}) {
    $$opts{whatsin} = 'archive' if ($$opts{source} && ($$opts{source} =~ /$is_archive/)); }
  return $getOptions_success;
}

sub read_keyvals {
  my ($self, $conversion_options, %read_options) = @_;
  my $cmdopts = [];
  while (my ($key, $value) = splice(@$conversion_options, 0, 2)) {
    # TODO: Is skipping over empty values ever harmful? Do we have non-empty defaults anywhere?
    next if (!length($value)) && (grep { /^$key\=/ } @GETOPT_KEYS);
    $key = "--$key" unless $key =~ /^\-\-/;
    $value = length($value) ? "=$value" : '';
    CORE::push @$cmdopts, "$key$value";
  }
  # Read into a Config object:
  return $self->read($cmdopts, %read_options); }

sub scan_to_keyvals {
  my ($self, $argref, %read_options) = @_;
  local @ARGV = @$argref;
  my ($spec, $keyvals) = getopt_specification(type => 'keyvals');
  my $silent = %read_options && $read_options{silent};
  my $getOptions_success = GetOptions(%$spec);
  if (!$getOptions_success && !$silent) {
    pod2usage(-message => $LaTeXML::IDENTITY, -exitval => 1, -verbose => 99,
      -input => pod_where({ -inc => 1 }, __PACKAGE__),
      -sections => 'OPTIONS/SYNOPSIS', -output => \*STDERR);
  }
  CORE::push @$keyvals, ['source', $ARGV[0]] if $ARGV[0];
  return $getOptions_success && $keyvals;
}

###########################################
#### Options Object Hashlike API      #####
###########################################
sub get {
  my ($self, $key, $value) = @_;
  return $$self{opts}{$key}; }

sub set {
  my ($self, $key, $value) = @_;
  $$self{dirty} = 1;
  $$self{opts}{$key} = $value;
  return; }

sub push {
  my ($self, $key, $value) = @_;
  $$self{dirty} = 1;
  $$self{opts}{$key} = [] unless ref $$self{opts}{$key};
  CORE::push @{ $$self{opts}{$key} }, $value;
  return; }

sub delete {
  my ($self, $key) = @_;
  $$self{dirty} = 1;
  delete $$self{opts}{$key};
  return; }

sub exists {
  my ($self, $key) = @_;
  return exists $$self{opts}{$key}; }

sub defined {
  my ($self, $key) = @_;
  return defined $$self{opts}{$key}; }

sub keys {
  my ($self) = @_;
  return keys %{ $$self{opts} }; }

sub options {
  my ($self) = @_;
  return $$self{opts}; }

sub clone {
  my ($self) = @_;
  my $clone = LaTeXML::Common::Config->new(%{ $self->options });
  $$clone{dirty} = $$self{dirty};
  return $clone; }

###########################################
#### Option Sanity Checking           #####
###########################################

# Perform all option sanity checks
sub check {
  my ($self) = @_;
  return unless $$self{dirty};
  # 1. Resolve profile
  $self->_obey_profile;
  # 2. Place sane defaults where needed
  return $self->_prepare_options; }

sub _obey_profile {
  my ($self) = @_;
  $$self{dirty} = 1;
  my $opts = $$self{opts};
  my $profile = lc($$opts{profile} || 'custom');
  $profile =~ s/\.opt$//;
  # Look at the PROFILES_DB or find a profiles file (otherwise fallback to custom)
  my $profile_opts = {};
  if ($profile ne 'custom') {
    if (defined $$PROFILES_DB{$profile}) {
      %$profile_opts = %{ $$PROFILES_DB{$profile} }
    } elsif (my $file = pathname_find($profile . '.opt', paths => $$opts{paths},
        types => [], installation_subdir => 'resources/Profiles')) {
      my $conf_tmp = LaTeXML::Common::Config->new;
      $conf_tmp->read(_read_options_file($file));
      $profile_opts = $conf_tmp->options;
    } else {
      # Throw an error, fallback to custom
      carp("Warning:unexpected:$profile Profile $profile was not recognized, reverting to 'custom'\n");
      $$opts{profile} = 'custom';
      $profile = 'custom';
    }
  }
  # Erase the profile, save it as cache key
  delete $$opts{profile};
  $$opts{cache_key} = $profile unless defined $$opts{cache_key};
  if (%$profile_opts) {
    # Merge the new options with the profile defaults:
    for my $key (grep { defined $$opts{$_} } (CORE::keys %$opts)) {
      if ($key =~ /^p(ath|reload)/) {    # Paths and preloads get merged in
        $$profile_opts{$key} = [] unless defined $$profile_opts{$key};
        foreach my $entry (@{ $$opts{$key} }) {
          my $new = 1;
          foreach (@{ $$profile_opts{$key} }) {
            if ($entry eq $_) { $new = 0; last; }
          }
          # If new to the array, push:
          CORE::push(@{ $$profile_opts{$key} }, $entry) if ($new);
        }
      } else {                           # The other options get overwritten
        $$profile_opts{$key} = $$opts{$key};
      }
    }
    %$opts = %$profile_opts;             # Move back into the user options
  }
  return; }

# TODO: Best way to throw errors when options don't work out?
#       How about in the case of Extras::ReadOptions?
#       Error() and Warn() would be neat, but we have to make sure STDERR is caught beforehand.
#       Also, there is no eval() here, so we might need a softer handling of Error()s.
sub _prepare_options {
  my ($self) = @_;
  my $opts = $$self{opts};
  #======================================================================
  # I. Sanity check and Completion of Core options.
  #======================================================================
  # "safe" and semi-perlcrtic acceptable way to set DEBUG inside arbitrary modules.
  # Note: 'LaTeXML' refers to the top-level class
  { no strict 'refs';
    foreach my $ltx_class (@{ $$opts{debug} || [] }) {
      if ($ltx_class eq 'LaTeXML') {
        ${'LaTeXML::DEBUG'} = 1; }
      else {
        ${ 'LaTeXML::' . $ltx_class . '::DEBUG' } = 1; } } }

  $$opts{input_limit} = 100 unless defined $$opts{input_limit}; # 100 jobs until restart
  $$opts{timeout} = 600 unless defined $$opts{timeout}; # 10 minute timeout default
  $$opts{expire} = 600 unless defined $$opts{expire}; # 10 minute timeout default
  $$opts{mathparse} = 'RecDescent' unless defined $$opts{mathparse};
  if ($$opts{mathparse} eq 'no') {
    $$opts{mathparse}   = 0;
    $$opts{nomathparse} = 1; }    #Backwards compatible
  $$opts{verbosity} = 0     unless defined $$opts{verbosity};
  $$opts{preload}   = []    unless defined $$opts{preload};
  $$opts{paths}     = ['.'] unless defined $$opts{paths};
  @{ $$opts{paths} } = map { pathname_canonical($_) } @{ $$opts{paths} };
  foreach (('destination', 'dbfile', 'sourcedirectory', 'sitedirectory')) {
    $$opts{$_} = pathname_canonical($$opts{$_}) if defined $$opts{$_};
  }

  if (!defined $$opts{whatsin}) {
    if ($$opts{preamble} || $$opts{postamble}) {
      # Preamble or postamble imply a fragment whatsin
      $$opts{whatsin} = 'fragment'; }
    else {    # Default input chunk is a document
      $$opts{whatsin} = 'document'; } }
  $$opts{type}     = 'auto'     unless defined $$opts{type};
  unshift(@{ $$opts{preload} }, ('TeX.pool', 'LaTeX.pool', 'BibTeX.pool')) if ($$opts{type} eq 'BibTeX');

  # Destination extension might indicate the format:
  if ((!defined $$opts{extension}) && (defined $$opts{destination})) {
    if ($$opts{destination} =~ /\.([^.]+)$/) {
      $$opts{extension} = $1; } }
  if ((!defined $$opts{format}) && (defined $$opts{extension})) {
      $$opts{format} = $$opts{extension}; }
  if ((!defined $$opts{extension}) && (defined $$opts{format})) {
    if ($$opts{format} =~ /^html/) {
      $$opts{extension} = 'html'; }
    elsif ($$opts{format} =~ /^xhtml/) {
      $$opts{extension} = 'xhtml'; }
    else {
      $$opts{extension} = 'xml'; } }
  if (!defined $$opts{whatsout}) {
    if ((defined $$opts{extension}) && ($$opts{extension} eq 'zip')) {
      $$opts{whatsout} = 'archive';
    } else {
      $$opts{whatsout} = 'document';
    } }
  if ($$opts{format}) {
    # Lower-case for sanity's sake
    $$opts{format} = lc($$opts{format});
    $$opts{format} = 'html5' if $$opts{format} eq 'html';    # Default
    if ($$opts{format} eq 'zip') {
      # Not encouraged! But try to produce something sensible anyway...
      $$opts{format}   = 'html5';
      $$opts{whatsout} = 'archive';
    }
    $$opts{is_html}  = ($$opts{format} =~ /^html/);
    $$opts{is_xhtml} = ($$opts{format} =~ /^(xhtml5?|epub|mobi)$/);
    $$opts{whatsout} = 'archive' if (($$opts{format} eq 'epub') || ($$opts{format} eq 'mobi'));
  }
  #======================================================================
  # II. Sanity check and Completion of Post options.
  #======================================================================
  # Any post switch implies post (TODO: whew, lots of those, add them all!):
  $$opts{math_formats} = [] unless defined $$opts{math_formats};
  $$opts{post} = 1 if ((!defined $$opts{post}) &&
    (scalar(@{ $$opts{math_formats} }))
    || ($$opts{stylesheet})
    || $$opts{is_html}
    || $$opts{is_xhtml}
    || (($$opts{format}||'') eq 'jats')
    || ($$opts{whatsout} && ($$opts{whatsout} ne 'document'))
  );
# || ... || ... || ...
# $$opts{post}=0 if (defined $$opts{mathparse} && (! $$opts{mathparse})); # No-parse overrides post-processing
  if ($$opts{post}) {    # No need to bother if we're not post-processing
                         # Default: scan and crossref on, other advanced off
    $$opts{prescan}  = undef unless defined $$opts{prescan};
    $$opts{dbfile}   = undef unless defined $$opts{dbfile};
    $$opts{scan}     = 1     unless defined $$opts{scan};
    $$opts{index}    = 1     unless defined $$opts{index};
    $$opts{crossref} = 1     unless defined $$opts{crossref};
    $$opts{sitedirectory} = defined $$opts{sitedirectory} ? $$opts{sitedirectory}
      : (defined $$opts{destination} ? pathname_directory($$opts{destination})
      : (defined $$opts{dbfile} ? pathname_directory($$opts{dbfile})
        : "."));
    $$opts{sourcedirectory} = undef unless defined $$opts{sourcedirectory};
    $$opts{numbersections}  = 1     unless defined $$opts{numbersections};
    $$opts{navtoc}          = undef unless defined $$opts{numbersections};
    $$opts{navtocstyles} = { context => 1, normal => 1, none => 1 } unless defined $$opts{navtocstyles};
    $$opts{navtoc} = lc($$opts{navtoc}) if defined $$opts{navtoc};
    delete $$opts{navtoc} if ($$opts{navtoc} && ($$opts{navtoc} eq 'none'));

    if ($$opts{navtoc}) {
      if (!$$opts{navtocstyles}->{ $$opts{navtoc} }) {
        croak($$opts{navtoc} . " is not a recognized style of navigation TOC"); }
      if (!$$opts{crossref}) {
        croak("Cannot use option \"navigationtoc\" (" . $$opts{navtoc} . ") without \"crossref\""); } }
    $$opts{urlstyle}       = 'server' unless defined $$opts{urlstyle};
    $$opts{bibliographies} = []       unless defined $$opts{bibliographies};

    # Validation:
    $$opts{validate} = 1 unless defined $$opts{validate};
    # Graphics:
    $$opts{mathimagemag} = 1.75 unless defined $$opts{mathimagemag};
    if ((defined $$opts{destination}) || ($$opts{whatsout} =~ /^archive/)) {
      # We want the graphics enabled by default, but only when we have a destination
      $$opts{dographics} = 1 unless defined $$opts{dographics};
      $$opts{picimages} = 1 if (($$opts{format} eq "html4")||($$opts{format} eq "jats"))
	  && !defined $$opts{picimages};
    }
    # Split sanity:
    if ($$opts{split}) {
      $$opts{splitat}     = 'section' unless defined $$opts{splitat};
      $$opts{splitnaming} = 'id'      unless defined $$opts{splitnaming};
      $$opts{splitback} = "//ltx:bibliography | //ltx:appendix | //ltx:index" unless defined $$opts{splitback};
      $$opts{splitpaths} = {
        part    => "//ltx:part | " . $$opts{splitback},
        chapter => "//ltx:part | //ltx:chapter | " . $$opts{splitback},
        section => "//ltx:part | //ltx:chapter | //ltx:section | " . $$opts{splitback},
        subsection => "//ltx:part | //ltx:chapter | //ltx:section | //ltx:subsection | " . $$opts{splitback},
        subsubsection => "//ltx:part | //ltx:chapter | //ltx:section | //ltx:subsection | //ltx:subsubsection | " . $$opts{splitback} }
        unless defined $$opts{splitpaths};

      $$opts{splitnaming} = _checkOptionValue('--splitnaming', $$opts{splitnaming},
        qw(id idrelative label labelrelative));
      $$opts{splitat} = _checkOptionValue('--splitat', $$opts{splitat}, CORE::keys %{ $$opts{splitpaths} });
      $$opts{splitpath} = $$opts{splitpaths}->{ $$opts{splitat} } unless defined $$opts{splitpath}; }

    # Check for appropriate combination of split, scan, prescan, dbfile, crossref
    if ($$opts{split} && (!defined $$opts{destination}) && ($$opts{whatsout} !~ /^archive/)) {
      croak("Must supply --destination when using --split"); }
    if ($$opts{prescan} && !$$opts{scan}) {
      croak("Makes no sense to --prescan with scanning disabled (--noscan)"); }
    if ($$opts{prescan} && (!defined $$opts{dbfile})) {
      croak("Cannot prescan documents (--prescan) without specifying --dbfile"); }
    if (!$$opts{prescan} && $$opts{crossref} && !($$opts{scan} || (defined $$opts{dbfile}))) {
      croak("Cannot cross-reference (--crossref) without --scan or --dbfile "); }
    if ($$opts{crossref}) {
      $$opts{urlstyle} = _checkOptionValue('--urlstyle', $$opts{urlstyle}, qw(server negotiated file)); }
    if (($$opts{permutedindex} || $$opts{splitindex}) && (!defined $$opts{index})) {
      $$opts{index} = 1; }
    if (!$$opts{prescan} && $$opts{index} && !($$opts{scan} || defined $$opts{crossref})) {
      croak("Cannot generate index (--index) without --scan or --dbfile"); }
    if (!$$opts{prescan} && @{ $$opts{bibliographies} } && !($$opts{scan} || defined $$opts{crossref})) {
      croak("Cannot generate bibliography (--bibliography) without --scan or --dbfile"); }
    if ((!defined $$opts{destination}) && ($$opts{whatsout} !~ /^archive/)
      && (_checkMathFormat($opts, 'images') || _checkMathFormat($opts, 'svg')
        || $$opts{dographics} || $$opts{picimages})) {
      croak("Must supply --destination unless all auxilliary file writing is disabled"
          . "(--nomathimages --nomathsvg --nographicimages --nopictureimages --nodefaultcss)"); }

    # Format:
    #Default is XHTML, XML otherwise (TODO: Expand)
    $$opts{format} = "xml" if ($$opts{stylesheet}) && (!defined $$opts{format});
    $$opts{format} = "xhtml" unless defined $$opts{format};
    if (!$$opts{stylesheet}) {
      if    ($$opts{format} eq 'xhtml')       { $$opts{stylesheet} = "LaTeXML-xhtml.xsl"; }
      elsif ($$opts{format} eq "html4")       { $$opts{stylesheet} = "LaTeXML-html4.xsl"; }
      elsif ($$opts{format} =~ /^epub|mobi$/) { $$opts{stylesheet} = "LaTeXML-epub3.xsl"; }
      elsif ($$opts{format} eq "html5")       { $$opts{stylesheet} = "LaTeXML-html5.xsl"; }
      elsif ($$opts{format} eq "jats")       { $$opts{stylesheet} = "LaTeXML-jats.xsl"; }
      elsif ($$opts{format} eq "xml")         { delete $$opts{stylesheet}; }
      else                                    { croak("Unrecognized target format: " . $$opts{format}); }
    }
    # Check format and complete math and image options
    if ($$opts{format} eq 'html4') {
      $$opts{svg} = 0 unless defined $$opts{svg};    # No SVG by default in HTML.
      croak("Default html4 stylesheet only supports math images, not " . join(', ', @{ $$opts{math_formats} }))
        if (!defined $$opts{stylesheet})
        && scalar(grep { $_ ne 'images' } @{ $$opts{math_formats} });
      croak("Default html stylesheet does not support svg") if $$opts{svg};
      $$opts{math_formats} = [];
      _maybeAddMathFormat($opts, 'images');
    }
    $$opts{svg} = 1 unless defined $$opts{svg};      # If we're not making HTML, SVG is on by default
          # PMML default if we're HTMLy and all else fails and no mathimages:
    if (((!defined $$opts{math_formats}) || (!scalar(@{ $$opts{math_formats} })))
      && ($$opts{is_html} || $$opts{is_xhtml} || ($$opts{format} eq 'jats'))) {
      CORE::push @{ $$opts{math_formats} }, 'pmml';
    }
    # use parallel markup if there are multiple formats requested.
    $$opts{parallelmath} = 1 if ($$opts{math_formats} && (@{ $$opts{math_formats} } > 1));
  }
  # If really nothing hints to define format, then default it to XML
  $$opts{format} = 'xml' unless defined $$opts{format};
  $$self{dirty} = 0;
  return; }

## Utilities:

sub _addMathFormat {
  my ($opts, $fmt) = @_;
  $$opts{math_formats} = [] unless defined $$opts{math_formats};
  CORE::push(@{ $$opts{math_formats} }, $fmt)
    unless (grep { $_ eq $fmt } @{ $$opts{math_formats} }) || $$opts{removed_math_formats}->{$fmt};
  return; }

sub _removeMathFormat {
  my ($opts, $fmt) = @_;
  @{ $$opts{math_formats} } = grep { $_ ne $fmt } @{ $$opts{math_formats} };
  $$opts{removed_math_formats}->{$fmt} = 1;
  return; }

sub _maybeAddMathFormat {
  my ($opts, $fmt) = @_;
  unshift(@{ $$opts{math_formats} }, $fmt)
    unless (grep { $_ eq $fmt } @{ $$opts{math_formats} }) || $$opts{removed_math_formats}{$fmt};
  return; }

sub _checkMathFormat {
  my ($opts, $fmt) = @_;
  return grep { $_ eq $fmt } @{ $$opts{math_formats} }; }

sub _checkOptionValue {
  my ($option, $value, @choices) = @_;
  if ($value) {
    foreach my $choice (@choices) {
      return $choice if substr($choice, 0, length($value)) eq $value; } }
  croak("Value for $option, $value, doesn't match " . join(', ', @choices)); }

### This is from t/lib/TestDaemon.pm and ideally belongs in Util::Pathname
sub _read_options_file {
  my ($file) = @_;
  my $opts = [];
  my $OPT;
  print STDERR "(Loading profile $file...";
  unless (open($OPT, "<", $file)) {
    Error('expected', $file, "Could not open options file '$file'");
    return; }
  while (my $line = <$OPT>) {
    # Cleanup comments, padding on the input line.
    $line =~ s/(?<!\\)#.*$//;    # Strip trailing comments starting w/ # (but \# is quoted)
    $line =~ s/\\#/#/g;          # unslashify any \#
    $line =~ s/^\s+//;           # Trim leading & trailing whitespace
    $line =~ s/\s+$//;
    next unless $line;           # if line isn't empty, after that.....
    chomp($line);
    if ($line =~ /(\S+)\s*=\s*(.*)/) {
      my ($key, $value) = ($1, $2 || '');
      $value =~ s/\s+$//;
      # Special treatment for --path=$env:
      if ($value =~ /^\$(.+)$/) {
        my @values   = ();
        my $env_name = $1;
        my $env_value;
        # Allow $env/foo paths, starting with $env prefixes
        if ($env_name =~ /^([^\/]+)(\/+)(.+)$/) {
          my $trailer = $3;
          if (my $env_path = $ENV{$1}) {
            $env_path .= '/' unless $env_path =~ /\/$/;
            CORE::push @values, $env_path . $trailer; } }
        else {
          # But also the standard behaviour, where the $env is an array of paths
          $env_value = $ENV{$env_name};
          next unless $env_value;
          @values = grep { -d $_ } reverse(split(':', $env_value));
          next unless @values; }
        CORE::push(@$opts, "--$key=$_") foreach (@values); }
      else {
        $value = $value ? "=$value" : '';
        CORE::push @$opts, "--$key" . $value; } }
    else {
      Warning('unexpected', $line, undef,
        "Unrecognized configuration data '$line'"); }
  }
  close $OPT;
  print STDERR " )\n";
  return $opts; }

1;

__END__

=pod

=head1 NAME

C<LaTeXML::Common::Config> - Configuration logic for LaTeXML

=head1 SYNPOSIS

    use LaTeXML::Common::Config;
    my $config = LaTeXML::Common::Config->new(
              profile=>'name',
              timeout=>60,
              ... );
    $config->read(\@ARGV);
    $config->check;

    my $value = $config->get($name);
    $config->set($name,$value);
    $config->delete($name);
    my $bool = $config->exists($name);
    my @keys = $config->keys;
    my $options_hashref = $config->options;
    my $config_clone = $config->clone;

=head1 DESCRIPTION

Configuration management class for LaTeXML options.
    * Responsible for defining the options interface
      and parsing the usual Perl command-line options syntax
    * Provides the intuitive getters, setters, as well as
      hash methods for manipulating the option values.
    * Also supports cloning into new configuration objects.

=head2 METHODS

=over 4

=item C<< my $config = LaTeXML::Common::Config->new(%options); >>

Creates a new configuration object. Note that you should try
    not to provide your own %options hash but rather create an empty
    configuration and use $config->read to read in the options.

=item C<< $config->read(\@ARGV); >>

This is the main method for parsing in LaTeXML options.
    The input array should either be @ARGV, e.g. when the
    options were provided from the command line using the
    classic Getopt::Long syntax,
    or any other array reference that conforms to that setup.

=item C<< $config->check; >>

Ensures that the configuration obeys the given profile and
    performs a set of assignments of meaningful defaults
    (when needed) and normalizations (for relative paths, etc).

=item C<< my $value = $config->get($name); >>

Classic getter for the $value of an option $name.

=item C<< $config->set($name,$value); >>

Classic setter for the $value of an option $name.

=item C<< $config->delete($name); >>

Deletes option $name from the configuration.

=item C<< my $bool = $config->exists($name); >>

Checks whether the key $name exists in the options hash of the configuration.
    Similarly to Perl's "exist" for hashes, it returns true even when
    the option's value is undefined.

=item C<< my @keys = $config->keys; >>

Similar to "keys %hash" in Perl. Returns an array of all option names.

=item C<< my $options_hashref = $config->options; >>

Returns the actual hash reference that holds all options within the configuration object.

=item C<< my $config_clone = $config->clone; >>

Clones $config into a new LaTeXML::Common::Config object, $config_clone.

=back

=head1 OPTION SYNOPSIS

latexmls/latexmlc [options]

 Options:
 --VERSION               show version number.
 --help                  shows this help message.
 --destination=file      specifies destination file.
 --output=file           [obsolete synonym for --destination]
 --preload=module        requests loading of an optional module;
                         can be repeated
 --preamble=file         loads a tex file containing document
                         frontmatter. MUST include \begin{document}
                         or equivalent
 --postamble=file        loads a tex file containing document
                         backmatter. MUST include \end{document}
                         or equivalent
 --includestyles         allows latexml to load raw *.sty file;
                         by default it avoids this.
 --base=dir              sets the current working directory
 --path=dir              adds dir to the paths searched for files,
                         modules, etc;
 --log=file              specifies log file (default: STDERR)
 --autoflush=count       Automatically restart the daemon after
                         "count" inputs. Good practice for vast
                         batch jobs. (default: 100)
 --timeout=secs          Timecap for conversions (default 600)
 --expire=secs           Timecap for server inactivity (default 600)
 --address=URL           Specify server address (default: localhost)
 --port=number           Specify server port (default: 3354)
 --documentid=id         assign an id to the document root.
 --quiet                 suppress messages (can repeat)
 --verbose               more informative output (can repeat)
 --strict                makes latexml less forgiving of errors
 --bibtex                processes a BibTeX bibliography.
 --xml                   requests xml output (default).
 --tex                   requests TeX output after expansion.
 --box                   requests box output after expansion
                         and digestion.
 --format=name           requests "name" as the output format.
                         Supported: tex,box,xml,html4,html5,xhtml
                         html implies html5
 --noparse               suppresses parsing math (default: off)
 --parse=name            enables parsing math (default: on)
                         and selects parser framework "name".
                         Supported: RecDescent, no
 --profile=name          specify profile as defined in
                         LaTeXML::Common::Config
                         Supported: standard|math|fragment|...
                         (default: standard)
 --mode=name             Alias for profile
 --cache_key=name        Provides a name for the current option set,
                         to enable daemonized conversions without
                         needing re-initializing
 --whatsin=chunk         Defines the provided input chunk,
                         choose from document (default), fragment
                         and formula
 --whatsout=chunk        Defines the expected output chunk,
                         choose from document (default), fragment
                         and formula
 --post                  requests a followup post-processing
 --nopost                forbids followup post-processing
 --validate, --novalidate Enables (the default) or disables
                         validation of the source xml.
 --omitdoctype           omits the Doctype declaration,
 --noomitdoctype         disables the omission (the default)
 --numbersections        enables (the default) the inclusion of
                         section numbers in titles, crossrefs.
 --nonumbersections      disables the above
 --timestamp             provides a timestamp (typically a time and date)
                         to be embedded in the comments
 --embed                 requests an embeddable XHTML snippet
                         (requires: --post,--profile=fragment)
                         DEPRECATED: Use --whatsout=fragment
                         TODO: Remove completely
 --stylesheet            specifies a stylesheet,
                         to be used by the post-processor.
 --css=cssfile           adds a css stylesheet to html/xhtml
                         (can be repeated)
 --nodefaultresources    disables processing built-in resources
 --javscript=jsfile      adds a link to a javascript file into
                         html/html5/xhtml (can be repeated)
 --icon=iconfile         specify a file to use as a "favicon"
 --xsltparameter=name:value passes parameters to the XSLT.
 --split                 requests splitting each document
 --nosplit               disables the above (default)
 --splitat               sets level to split the document
 --splitpath=xpath       sets xpath expression to use for
                         splitting (default splits at
                         sections, if splitting is enabled)
 --splitnaming=(id|idrelative|label|labelrelative) specifies
                         how to name split files (idrelative).
 --scan                  scans documents to extract ids,
                         labels, etc.
                         section titles, etc. (default)
 --noscan                disables the above
 --crossref              fills in crossreferences (default)
 --nocrossref            disables the above
 --urlstyle=(server|negotiated|file) format to use for urls
                         (default server).
 --navigationtoc=(context|none) generates a table of contents
                         in navigation bar
 --index                 requests creating an index (default)
 --noindex               disables the above
 --splitindex            Splits index into pages per initial.
 --nosplitindex          disables the above (default)
 --permutedindex         permutes index phrases in the index
 --nopermutedindex       disables the above (default)
 --bibliography=file     sets a bibliography file
 --splitbibliography     splits the bibliography into pages per
                         initial.
 --nosplitbibliography   disables the above (default)
 --prescan               carries out only the split (if
                         enabled) and scan, storing
                         cross-referencing data in dbfile
                         (default is complete processing)
 --dbfile=dbfile         sets file to store crossreferences
 --sitedirectory=dir     sets the base directory of the site
 --sourcedirectory=dir   sets the base directory of the
                         original TeX source
 --source=input          as an alternative to passing the input as
                         the last argument, after the option set
                         you can also specify it as the value here.
                         useful for predictable API calls
 --mathimages            converts math to images
                         (default for html4 format)
 --nomathimages          disables the above
 --mathimagemagnification=mag specifies magnification factor
 --presentationmathml    converts math to Presentation MathML
                         (default for xhtml & html5 formats)
 --pmml                  alias for --presentationmathml
 --nopresentationmathml  disables the above
 --linelength=n          formats presentation mathml to a
                         linelength max of n characters
 --contentmathml         converts math to Content MathML
 --nocontentmathml       disables the above (default)
 --cmml                  alias for --contentmathml
 --openmath              converts math to OpenMath
 --noopenmath            disables the above (default)
 --om                    alias for --openmath
 --keepXMath             preserves the intermediate XMath
                         representation (default is to remove)
 --mathtex               adds TeX annotation to parallel markup
 --nomathtex             disables the above (default)
 --parallelmath          use parallel math annotations (default)
 --noparallelmath        disable parallel math annotations
 --plane1                use plane-1 unicode for symbols
                         (default, if needed)
 --noplane1              do not use plane-1 unicode
 --graphicimages         converts graphics to images (default)
 --nographicimages       disables the above
 --graphicsmap=type.type specifies a graphics file mapping
 --pictureimages         converts picture environments to
                         images (default)
 --nopictureimages       disables the above
 --svg                   converts picture environments to SVG
 --nosvg                 disables the above (default)
 --nocomments            omit comments from the output
 --inputencoding=enc     specify the input encoding.
 --debug=package         enables debugging output for the named
                         package


If you want to provide a TeX snippet directly on input, rather than supply a filename,
use the C<literal:> protocol to prefix your snippet.

=head1 OPTIONS AND ARGUMENTS

=head2 General Options

=over 4

=item C<--verbose>

Increases the verbosity of output during processing, used twice is pretty chatty.
    Can be useful for getting more details when errors occur.

=item C<--quiet>

Reduces the verbosity of output during processing, used twice is pretty silent.

=item C<--VERSION>

Shows the version number of the LaTeXML package..

=item C<--debug>=I<package>

Enables debugging output for the named package. The package is given without the leading LaTeXML::.

=item C<--base>=I<dir>

Sepcifies the base working directory for the conversion server.
    Useful when converting sets of documents that use relative paths.

=item C<--log>=I<file>

Specifies the log file; be default any conversion messages are printed to STDERR.

=item C<--help>

Shows this help message.

=back


=head2 Source Options

=over 4

=item C<--destination>=I<file>

Specifies the destination file; by default the XML is written to STDOUT.


=item C<--preload>=I<module>

Requests the loading of an optional module or package.  This may be useful if the TeX code
    does not specificly require the module (eg. through input or usepackage).
    For example, use C<--preload=LaTeX.pool> to force LaTeX mode.

=item C<--preamble>=I<file>

Requests the loading of a tex file with document frontmatter, to be read in before the converted document,
    but after all --preload entries.

Note that the given file MUST contain \begin{document} or an equivalent environment start,
    when processing LaTeX documents.

If the file does not contain content to appear in the final document, but only macro definitions and
    setting of internal counters, it is more appropriate to use --preload instead.

=item C<--postamble>=I<file>

Requests the loading of a tex file with document backmatter, to be read in after the converted document.

Note that the given file MUST contain \end{document} or an equivalent environment end,
    when processing LaTeX documents.

=item C<--sourcedirectory>=I<source>

Specifies the directory where the original latex source is located.
Unless LaTeXML is run from that directory, or it can be determined
from the xml filename, it may be necessary to specify this option in
order to find graphics and style files.

=item C<--path>=I<dir>

Add I<dir> to the search paths used when searching for files, modules, style files, etc;
    somewhat like TEXINPUTS.  This option can be repeated.

=item C<--validate>, C<--novalidate>

Enables (or disables) the validation of the source XML document (the default).

=item C<--bibtex>

Forces latexml to treat the file as a BibTeX bibliography.
    Note that the timing is slightly different than the usual
    case with BibTeX and LaTeX.  In the latter case, BibTeX simply
    selects and formats a subset of the bibliographic entries; the
    actual TeX expansion is carried out when the result is included
    in a LaTeX document.  In contrast, latexml processes and expands
    the entire bibliography; the selection of entries is done
    during post-processing.  This also means that any packages
    that define macros used in the bibliography must be
    specified using the C<--preload> option.

=item C<--inputencoding=>I<encoding>

Specify the input encoding, eg. C<--inputencoding=iso-8859-1>.
    The encoding must be one known to Perl's Encode package.
    Note that this only enables the translation of the input bytes to
    UTF-8 used internally by LaTeXML, but does not affect catcodes.
    In such cases, you should be using the inputenc package.
    Note also that this does not affect the output encoding, which is
    always UTF-8.

=back


=head2 TeX Conversion Options

=over 4

=item C<--includestyles>

This optional allows processing of style files (files with extensions C<sty>,
    C<cls>, C<clo>, C<cnf>).  By default, these files are ignored  unless a latexml
    implementation of them is found (with an extension of C<ltxml>).

These style files generally fall into two classes:  Those
    that merely affect document style are ignorable in the XML.
    Others define new markup and document structure, often using
    deeper LaTeX macros to achieve their ends.  Although the omission
    will lead to other errors (missing macro definitions), it is
    unlikely that processing the TeX code in the style file will
    lead to a correct document.


=item C<--timeout>=I<secs>

Set time cap for conversion jobs, in seconds. Any job failing to convert in the
    time range would return with a Fatal error of timing out.
    Default value is 600, set to 0 to disable.

=item C<--nocomments>

Normally latexml preserves comments from the source file, and adds a comment every 25 lines as
    an aid in tracking the source.  The option --nocomments discards such comments.

=item C<--documentid>=I<id>

Assigns an ID to the root element of the XML document.  This ID is generally
    inherited as the prefix of ID's on all other elements within the document.
    This is useful when constructing a site of multiple documents so that
    all nodes have unique IDs.

=item C<--strict>

Specifies a strict processing mode. By default, undefined control sequences and
    invalid document constructs (that violate the DTD) give warning messages, but attempt
    to continue processing.  Using C<--strict> makes them generate fatal errors.

=item C<--post>

Request post-processing, auto-enabled by any requested post-processor. Disabled by default.
    If post-processing is enabled, the graphics and cross-referencing processors are on by default.

=back


=head2 Format Options

=over 4

=item C<--format>=C<(html|html5|html4|xhtml|xml|epub)>

Specifies the output format for post processing.
By default, it will be guessed from the file extension of the destination
(if given), with html implying C<html5>, xhtml implying C<xhtml> and the
default being C<xml>, which you probably don't want.

The C<html5> format converts the material to html5 form with mathematics as MathML;
C<html5> supports SVG.
C<html4> format converts the material to the earlier html form, version 4,
and the mathematics to png images.
C<xhtml> format converts to xhtml and uses presentation MathML (after attempting
to parse the mathematics) for representing the math.  C<html5> similarly converts
math to presentation MathML. In these cases, any
graphics will be converted to web-friendly formats and/or copied to the
destination directory. If you simply specify C<html>, it will treat that as C<html5>.

For the default, C<xml>, the output is left in LaTeXML's internal xml,
but the math is parsed and converted to presentation MathML.
For html, html5 and xhtml, a default stylesheet is provided, but see
the C<--stylesheet> option.

=item C<--xml>

Requests XML output; this is the default.
  DEPRECATED: use --format=xml instead

=item C<--tex>

Requests TeX output for debugging purposes;
    processing is only carried out through expansion and digestion.
    This may not be quite valid TeX, since Unicode may be introduced.

=item C<--box>

Requests Box output for debugging purposes;
    processing is carried out through expansion and digestions,
    and the result is printed.

=item C<--profile>

Variety of shorthand profiles.
    Note that the profiles come with a variety of preset options.
    You can examine any of them in their C<resources/Profiles/name.opt>
    file.

Example: C<latexmlc --profile=math '1+2=3'>

=item C<--omitdoctype>, C<--noomitdoctype>

Omits (or includes) the document type declaration.
The default is to include it if the document model was based on a DTD.

=item C<--numbersections>, C<--nonumbersections>

Includes (default), or disables the inclusion of section, equation, etc,
numbers in the formatted document and crossreference links.

=item C<--stylesheet>=I<xslfile>

Requests the XSL transformation of the document using the given xslfile as stylesheet.
If the stylesheet is omitted, a `standard' one appropriate for the
format (html4, html5 or xhtml) will be used.

=item C<--css>=I<cssfile>

Adds I<cssfile> as a css stylesheet to be used in the transformed html/html5/xhtml.
Multiple stylesheets can be used; they are included in the html in the
order given, following the default C<ltx-LaTeXML.css> (unless C<--nodefaultcss>).
The stylesheet is copied to the destination directory, unless it is an absolute url.

Some stylesheets included in the distribution are
  --css=navbar-left   Puts a navigation bar on the left.
                      (default omits navbar)
  --css=navbar-right  Puts a navigation bar on the left.
  --css=theme-blue    A blue coloring theme for headings.
  --css=amsart        A style suitable for journal articles.

=item C<--javascript>=I<jsfile>

Includes a link to the javascript file I<jsfile>, to be used in the transformed html/html5/xhtml.
Multiple javascript files can be included; they are linked in the html in the order given.
The javascript file is copied to the destination directory, unless it is an absolute url.

=item C<--icon>=I<iconfile>

Copies I<iconfile> to the destination directory and sets up the linkage in
the transformed html/html5/xhtml to use that as the "favicon".

=item C<--nodefaultresources>

Disables the copying and inclusion of resources added by the binding files;
This includes CSS, javascript or other files.  This does not affect
resources explicitly requested by the C<--css> or C<--javascript> options.


=item C<--timestamp>=I<timestamp>

Provides a timestamp (typically a time and date) to be embedded in
the comments by the stock XSLT stylesheets.
If you don't supply a timestamp, the current time and date will be used.
(You can use C<--timestamp=0> to omit the timestamp).

=item C<--xsltparameter>=I<name>:I<value>

Passes parameters to the XSLT stylesheet.
See the manual or the stylesheet itself for available parameters.

=back


=head2 Site & Crossreferencing Options

=over 4

=item C<--split>, C<--nosplit>

Enables or disables (default) the splitting of documents into multiple `pages'.
If enabled, the the document will be split into sections, bibliography,
index and appendices (if any) by default, unless C<--splitpath> is specified.

=item C<--splitat=>I<unit>

Specifies what level of the document to split at. Should be one
of C<chapter>, C<section> (the default), C<subsection> or C<subsubsection>.
For more control, see C<--splitpath>.

=item C<--splitpath=>I<xpath>

Specifies an XPath expression to select nodes that will generate separate
pages. The default splitpath is
  //ltx:section | //ltx:bibliography | //ltx:appendix | //ltx:index

Specifying

  --splitpath="//ltx:section | //ltx:subsection
         | //ltx:bibliography | //ltx:appendix | //ltx:index"

would split the document at subsections as well as sections.

=item C<--splitnaming>=C<(id|idrelative|label|labelrelative)>

Specifies how to name the files for subdocuments created by splitting.
The values C<id> and C<label> simply use the id or label of the subdocument's
root node for it's filename.  C<idrelative> and C<labelrelative> use
the portion of the id or label that follows the parent document's
id or label. Furthermore, to impose structure and uniqueness,
if a split document has children that are also split, that document
(and it's children) will be in a separate subdirectory with the
name index.

=item C<--scan>, C<--noscan>

Enables (default) or disables the scanning of documents for ids, labels,
references, indexmarks, etc, for use in filling in refs, cites, index and
so on.  It may be useful to disable when generating documents not based
on the LaTeXML doctype.

=item C<--crossref>, C<--nocrossref>

Enables (default) or disables the filling in of references, hrefs, etc
based on a previous scan (either from C<--scan>, or C<--dbfile>)
It may be useful to disable when generating documents not based
on the LaTeXML doctype.

=item C<--urlstyle>=C<(server|negotiated|file)>

This option determines the way that URLs within the documents
are formatted, depending on the way they are intended to be served.
The default, C<server>, eliminates unneccessary
trailing C<index.html>.  With C<negotiated>, the trailing
file extension (typically C<html> or C<xhtml>) are eliminated.
The scheme C<file> preserves complete (but relative) urls
so that the site can be browsed as files without any server.

=item C<--navigationtoc>=C<(context|none)>

Generates a table of contents in the navigation bar; default is C<none>.
The `context' style of TOC, is somewhat verbose and reveals more detail near the current
page; it is most suitable for navigation bars placed on the left or right.
Other styles of TOC should be developed and added here, such as a short form.

=item C<--index>, C<--noindex>

Enables (default) or disables the generation of an index from indexmarks
embedded within the document.  Enabling this has no effect unless
there is an index element in the document (generated by \printindex).

=item C<--splitindex>, C<--nosplitindex>

Enables or disables (default) the splitting of generated indexes
into separate pages per initial letter.

=item C<--bibliography=>I<pathname>

Specifies a bibliography generated from a BibTeX file
to be used to fill in a bibliography element.
Hand-written bibliographies placed in a C<thebibliography> environment
do not need this.  The option has no effect unless
there is an bibliography element in the document (generated by \bibliography).

Note that this option provides the bibliography to be used to
fill in the bibliography element (generated by C<\bibliography>);
latexmlpost does not (currently) directly process and format such a bibliography.

=item C<--splitbibliography>, C<--nosplitbibliography>

Enables or disables (default) the splitting of generated bibliographies
into separate pages per initial letter.

=item C<--prescan>

By default C<latexmlpost> processes a single document into one
(or more; see C<--split>) destination files in a single pass.
When generating a complicated site consisting of several documents
it may be advantageous to first scan through the documents
to extract and store (in C<dbfile>) cross-referencing data
(such as ids, titles, urls, and so on).
A later pass then has complete information allowing all documents
to reference each other, and also constructs an index and bibliography
that reflects the entire document set.  The same effect (though less efficient)
can be achieved by running C<latexmlpost> twice, provided a C<dbfile>
is specified.

=item C<--dbfile>I<=file>

Specifies a filename to use for the crossreferencing data when
using two-pass processing.  This file may reside in the intermediate
destination directory.

=item C<--sitedirectory=>I<dir>

Specifies the base directory of the overall web site.
Pathnames in the database are stored in a form relative
to this directory to make it more portable.

=item C<--embed>

TODO: Deprecated, use --whatsout=fragment
Requests an embeddable XHTML div (requires: --post --format=xhtml),
    respectively the top division of the document's body.
    Caveat: This experimental mode is enabled only for fragment profile and post-processed
    documents (to XHTML).

=back


=head2 Math Options

These options specify how math should be converted into other formats.
Multiple formats can be requested; how they will be combined
depends on the format and other options.

=over 4

=item C<--noparse>

Suppresses parsing math (default: parsing is on)

=item C<--parse=name>

Enables parsing math (default: parsing is on)
    and selects parser framework "name".
    Supported: RecDescent, no
    Tip: --parse=no is equivalent to --noparse

=item C<--mathimages>, C<--nomathimages>

Requests or disables the conversion of math to images (png by default).
Conversion is the default for html4 format.

=item C<--mathsvg>, C<--nomathsvg>

Requests or disables the conversion of math to svg images.

=item C<--mathimagemagnification=>I<factor>

Specifies the magnification used for math images (both png and svg),
if they are made. Default is 1.75.

=item C<--presentationmathml>, C<--nopresentationmathml>

Requests or disables conversion of math to Presentation MathML.
Conversion is the default for xhtml and html5 formats.

=item C<--linelength>I<=number>

(Experimental) Line-breaks the generated Presentation
MathML so that it is no longer than I<number> `characters'.

=item C<--plane1>

Converts the content of Presentation MathML token elements to
the appropriate Unicode Plane-1 codepoints according to the selected font,
when applicable (the default).

=item C<--hackplane1>

Converts the content of Presentation MathML token elements to
the appropriate Unicode Plane-1 codepoints according to the selected font,
but only for the mathvariants double-struck, fraktur and script.
This gives support for current (as of August 2009) versions of
Firefox and MathPlayer, provided a sufficient set of fonts is available (eg. STIX).

=item C<--contentmathml>, C<--nocontentmathml>

Requests or disables conversion of math to Content MathML.
Conversion is disabled by default.
B<Note> that this conversion is only partially implemented.

=item C<--openmath>

Requests or disables conversion of math to OpenMath.
Conversion is disabled by default.
B<Note> that this conversion is only partially implemented.

=item C<--keepXMath>, C<--xmath>

By default, when any of the MathML or OpenMath conversions
are used, the intermediate math representation will be removed;
this option preserves it; it will be used as secondary parallel
markup, when it follows the options for other math representations.

=back


=head2 Graphics Options

=over 4

=item C<--graphicimages>, C<--nographicimages>

Enables (default) or disables the conversion of graphics
to web-appropriate format (png).

=item C<--graphicsmap=>I<sourcetype.desttype>

Specifies a mapping of graphics file types. Typically, graphics elements
specify a graphics file that will be converted to a more appropriate file
target format; for example, postscript files used for graphics with LaTeX
will be converted to png format for use on the web.  As with LaTeX,
when a graphics file is specified without a file type, the system will search
for the most appropriate target type file.

When this option is used, it overrides I<and replaces> the defaults and provides
a mapping of I<sourcetype> to I<desttype>.  The option can be
repeated to provide several mappings, with the earlier formats preferred.
If the I<desttype> is omitted, it specifies copying files of type I<sourcetype>, unchanged.

The default settings is equivalent to having supplied the options:
  svg png gif jpg jpeg eps.png ps.png ai.png pdf.png

The first formats are preferred and used unchanged, while the latter
ones are converted to png.

=item C<--pictureimages>, C<--nopictureimages>

Enables (default) or disables the conversion of picture environments
and pstricks material into images.

=item C<--svg>, C<--nosvg>

Enables or disables (default) the conversion of picture environments
and pstricks material to SVG.

=back


=head2 Daemon, Server and Client Options

Options used only for daemonized conversions, e.g. talking to a remote server
via latexmlc, or local processing via the C<LaTeXML::Plugin::latexmls> plugin.

For reliable communication and a stable conversion experience, invoke latexmls
only through the latexmlc client (you need to set --expire to a positive value,
in order to request auto-spawning of a dedicated conversion server).

=over 4

=back

=item C<--autoflush>=I<count>

Automatically restart the daemon after converting "count" inputs.
    Good practice for vast batch jobs. (default: 100)

=item C<--expire>=I<secs>

Set an inactivity timeout value in seconds.
    If the server process is not given any input for the specified duration,
    it will automatically terminate.
    The default value is 600 seconds, set to 0 to never expire,
    -1 to entirely opt out of using an independent server.

=item C<--address>=I<URL>

Specify server address (default: localhost)

=item C<--port>=I<number>

Specify server port (default: 3334 for math, 3344 for fragment and 3354 for standard)

=back

=head1 AUTHOR

Bruce Miller <bruce.miller@nist.gov>
Deyan Ginev <deyan.ginev@nist.gov>

=head1 COPYRIGHT

Public domain software, produced as part of work done by the
United States Government & not subject to copyright in the US.

=cut
