# tifffile/setup.py

"""Tifffile package Setuptools script."""

import re
import sys

from setuptools import setup


def search(pattern: str, string: str, flags: int = 0) -> str:
    """Return first match of pattern in string."""
    match = re.search(pattern, string, flags)
    if match is None:
        msg = f'{pattern=!r} not found'
        raise ValueError(msg)
    return match.groups()[0]


def fix_docstring_examples(docstring: str) -> str:
    """Return docstring with examples fixed for GitHub."""
    start = True
    indent = False
    lines = ['..', '  This file is generated by setup.py', '']
    for line in docstring.splitlines():
        if not line.strip():
            start = True
            indent = False
        if line.startswith('>>> '):
            indent = True
            if start:
                lines.extend(['.. code-block:: python', ''])
                start = False
        lines.append(('    ' if indent else '') + line)
    return '\n'.join(lines) + '\n'


with open('tifffile/tifffile.py', encoding='utf-8') as fh:
    code = fh.read()

version = search(r"__version__ = '(.*?)'", code).replace('.x.x', '.dev0')

description = search(r'"""(.*)\.(?:\r\n|\r|\n)', code)

readme = search(
    r'(?:\r\n|\r|\n){2}r"""(.*)"""(?:\r\n|\r|\n){2}from __future__',
    code,
    re.MULTILINE | re.DOTALL,
)
readme = '\n'.join(
    [description, '=' * len(description), *readme.splitlines()[1:]]
)

if 'sdist' in sys.argv:
    # update README, LICENSE, and CHANGES files

    with open('README.rst', 'w', encoding='utf-8', newline='\n') as fh:
        fh.write(fix_docstring_examples(readme))

    license = search(
        r'(# Copyright.*?(?:\r\n|\r|\n))(?:\r\n|\r|\n)+r""',
        code,
        re.MULTILINE | re.DOTALL,
    )
    license = license.replace('# ', '').replace('#', '')

    with open('LICENSE', 'w', encoding='utf-8', newline='\n') as fh:
        fh.write('BSD-3-Clause license\n\n')
        fh.write(license)

    revisions = search(
        r'(?:\r\n|\r|\n){2}(Revisions.*)- …',
        readme,
        re.MULTILINE | re.DOTALL,
    ).strip()

    with open('CHANGES.rst', encoding='utf-8') as fh:
        old = fh.read()

    old = old.split(revisions.splitlines()[-1])[-1]
    with open('CHANGES.rst', 'w', encoding='utf-8', newline='\n') as fh:
        fh.write(revisions.replace('---------', '=========').strip())
        fh.write(old)

setup(
    name='tifffile',
    version=version,
    license='BSD-3-Clause',
    description=description,
    long_description=readme,
    long_description_content_type='text/x-rst',
    author='Christoph Gohlke',
    author_email='cgohlke@cgohlke.com',
    url='https://www.cgohlke.com',
    project_urls={
        'Bug Tracker': 'https://github.com/cgohlke/tifffile/issues',
        'Source Code': 'https://github.com/cgohlke/tifffile',
        # 'Documentation': 'https://',
    },
    packages=['tifffile'],
    package_data={'tifffile': ['py.typed']},
    python_requires='>=3.12',
    install_requires=[
        'numpy>=2.1',
        # 'imagecodecs>=2026.5.10',
    ],
    extras_require={
        'codecs': ['imagecodecs>=2026.5.10'],
        'xml': ['lxml'],
        'zarr': ['zarr>=3.2.0', 'fsspec', 'kerchunk'],
        'plot': ['matplotlib'],
        'all': [
            'imagecodecs>=2026.5.10',
            'matplotlib',
            'lxml',
            'zarr>=3.2.0',
            'xarray',
            'fsspec',
            'kerchunk',
        ],
        'test': [
            'cmapfile',
            'czifile',
            'dask',
            'fsspec',
            'imagecodecs',
            'kerchunk',
            'lfdfiles',
            'lxml',
            'ndtiff',
            'oiffile',
            'psdtags',
            'pytest',
            'requests',
            'roifile',
            'xarray',
            'zarr>=3.2.0',
        ],
    },
    entry_points={
        'console_scripts': [
            'tifffile = tifffile:main',
            'tiffcomment = tifffile.tiffcomment:main',
            'tiff2fsspec = tifffile.tiff2fsspec:main',
            'lsm2bin = tifffile.lsm2bin:main',
        ],
        # 'napari.plugin': ['tifffile = tifffile.napari_tifffile'],
    },
    platforms=['any'],
    classifiers=[
        'Development Status :: 4 - Beta',
        'Intended Audience :: Science/Research',
        'Intended Audience :: Developers',
        'Operating System :: OS Independent',
        'Programming Language :: Python :: 3 :: Only',
        'Programming Language :: Python :: 3.12',
        'Programming Language :: Python :: 3.13',
        'Programming Language :: Python :: 3.14',
        'Programming Language :: Python :: 3.15',
    ],
)
